RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 SNED1Q8TER0 1413 aa10.8□□□□□ -0.68
SP140-207ENST00000456542 ABCC4O15439 1325 aa10.8□□□□□ -0.68
SP140-207ENST00000456542 KIF16BQ96L93 1317 aa10.8□□□□□ -0.68
SP140-207ENST00000456542 TIAM2Q8IVF5 1701 aa10.79□□□□□ -0.68
SP140-207ENST00000456542 NFKBIEO00221 500 aa10.79□□□□□ -0.68
SP140-207ENST00000456542 GRIPAP1Q4V328 841 aa10.79□□□□□ -0.68
SP140-207ENST00000456542 DDX46Q7L014 1031 aaKnown RBP10.79□□□□□ -0.68
SP140-207ENST00000456542 UBE3BQ7Z3V4 1068 aa10.79□□□□□ -0.68
SP140-207ENST00000456542 TMC4Q7Z404 712 aa10.79□□□□□ -0.68
SP140-207ENST00000456542 RTKN2Q8IZC4 609 aa10.79□□□□□ -0.68
SP140-207ENST00000456542 PLA2G12BQ9BX93 195 aa10.79□□□□□ -0.68
SP140-207ENST00000456542 SRCIN1Q9C0H9 1055 aa10.79□□□□□ -0.68
SP140-207ENST00000456542 PPEF1O14829 653 aaPredicted RBP10.78□□□□□ -0.68
SP140-207ENST00000456542 BBOX1O75936 387 aa10.78□□□□□ -0.68
SP140-207ENST00000456542 LMNB1P20700 586 aa10.78□□□□□ -0.68
SP140-207ENST00000456542 GRAPQ13588 217 aa10.78□□□□□ -0.68
SP140-207ENST00000456542 GRAPLQ8TC17 118 aaPredicted RBP10.78□□□□□ -0.68
SP140-207ENST00000456542 TAOK3Q9H2K8 898 aa10.78□□□□□ -0.68
SP140-207ENST00000456542 ZNF219Q9P2Y4 722 aaPredicted RBP10.78□□□□□ -0.68
SP140-207ENST00000456542 ZC3H4Q9UPT8 1303 aaKnown RBP10.78□□□□□ -0.68
SP140-207ENST00000456542 GRM8O00222 908 aa10.77□□□□□ -0.69
SP140-207ENST00000456542 CASP7P55210 303 aa10.77□□□□□ -0.69
SP140-207ENST00000456542 CTSWP56202 376 aa10.77□□□□□ -0.69
SP140-207ENST00000456542 RASSF7Q02833 373 aa10.77□□□□□ -0.69
SP140-207ENST00000456542 CCDC152Q4G0S7 254 aa10.77□□□□□ -0.69
SP140-207ENST00000456542 C9orf131Q5VYM1 1079 aa10.77□□□□□ -0.69
SP140-207ENST00000456542 SLC4A10Q6U841 1118 aa10.77□□□□□ -0.69
SP140-207ENST00000456542 ARHGAP45Q92619 1136 aa10.77□□□□□ -0.69
SP140-207ENST00000456542 JARID2Q92833 1246 aaPredicted RBP10.77□□□□□ -0.69
SP140-207ENST00000456542 ATP6V0A2Q9Y487 856 aa10.77□□□□□ -0.69
SP140-207ENST00000456542 RTL9Q8NET4 1388 aa10.77□□□□□ -0.69
SP140-207ENST00000456542 COL4A1P02462 1669 aa10.76□□□□□ -0.69
SP140-207ENST00000456542 NPM3O75607 178 aaKnown RBP10.76□□□□□ -0.69
SP140-207ENST00000456542 PRELPP51888 382 aa10.76□□□□□ -0.69
SP140-207ENST00000456542 FKBP4Q02790 459 aaKnown RBP eCLIP10.76□□□□□ -0.69
SP140-207ENST00000456542 SP8Q8IXZ3 490 aa10.76□□□□□ -0.69
SP140-207ENST00000456542 TTLL11Q8NHH1 800 aa10.76□□□□□ -0.69
SP140-207ENST00000456542 PSMD1Q99460 953 aa10.76□□□□□ -0.69
SP140-207ENST00000456542 API5Q9BZZ5 524 aaKnown RBP10.76□□□□□ -0.69
SP140-207ENST00000456542 TMX4Q9H1E5 349 aaPredicted RBP10.76□□□□□ -0.69
SP140-207ENST00000456542 RNF181Q9P0P0 153 aa10.76□□□□□ -0.69
SP140-207ENST00000456542 LTBP1Q14766 1721 aa10.75□□□□□ -0.69
SP140-207ENST00000456542 SPEF2Q9C093 1822 aa10.75□□□□□ -0.69
SP140-207ENST00000456542 OLFM4Q6UX06 510 aa10.75□□□□□ -0.69
SP140-207ENST00000456542 ZNF784Q8NCA9 323 aaPredicted RBP10.75□□□□□ -0.69
SP140-207ENST00000456542 CELF1Q92879 486 aaKnown RBP10.75□□□□□ -0.69
SP140-207ENST00000456542 C9orf78Q9NZ63 289 aaPredicted RBP10.75□□□□□ -0.69
SP140-207ENST00000456542 NOB1Q9ULX3 412 aaKnown RBP10.75□□□□□ -0.69
SP140-207ENST00000456542 UTYO14607 1347 aa10.75□□□□□ -0.69
SP140-207ENST00000456542 IPO8O15397 1037 aaKnown RBP10.74□□□□□ -0.69
SP140-207ENST00000456542 CSF1RP07333 972 aa10.74□□□□□ -0.69
SP140-207ENST00000456542 CCT4P50991 539 aaKnown RBP10.74□□□□□ -0.69
SP140-207ENST00000456542 RPS8P62241 208 aaKnown RBP10.74□□□□□ -0.69
SP140-207ENST00000456542 CDC5LQ99459 802 aaKnown RBP10.74□□□□□ -0.69
SP140-207ENST00000456542 SEC31BQ9NQW1 1179 aa10.74□□□□□ -0.69
SP140-207ENST00000456542 DUOX1Q9NRD9 1551 aa10.73□□□□□ -0.69
SP140-207ENST00000456542 BCAR3O75815 825 aa10.73□□□□□ -0.69
SP140-207ENST00000456542 RTFDC1Q9BY42 306 aaPredicted RBP10.73□□□□□ -0.69
SP140-207ENST00000456542 VPS33BQ9H267 617 aa10.73□□□□□ -0.69
SP140-207ENST00000456542 GREM2Q9H772 168 aa10.73□□□□□ -0.69
SP140-207ENST00000456542 NBPF7P0C2Y1 421 aaPredicted RBP10.72□□□□□ -0.69
SP140-207ENST00000456542 TRIM27P14373 513 aa10.72□□□□□ -0.69
SP140-207ENST00000456542 IARSP41252 1262 aaKnown RBP10.72□□□□□ -0.69
SP140-207ENST00000456542 FOXO4P98177 505 aa10.72□□□□□ -0.69
SP140-207ENST00000456542 DPP8Q6V1X1 898 aaPredicted RBP10.72□□□□□ -0.69
SP140-207ENST00000456542 ATF7IPQ6VMQ6 1270 aa10.72□□□□□ -0.69
SP140-207ENST00000456542 ANKRD18AQ8IVF6 992 aa10.72□□□□□ -0.69
SP140-207ENST00000456542 MPNDQ8N594 471 aa10.72□□□□□ -0.69
SP140-207ENST00000456542 SUPT20HQ8NEM7 779 aa10.72□□□□□ -0.69
SP140-207ENST00000456542 CCDC85AQ96PX6 553 aaPredicted RBP10.72□□□□□ -0.69
SP140-207ENST00000456542 USP44Q9H0E7 712 aa10.72□□□□□ -0.69
SP140-207ENST00000456542 ZNF277Q9NRM2 450 aaPredicted RBP10.72□□□□□ -0.69
SP140-207ENST00000456542 A0A1B0GUL6 1792 aa10.71□□□□□ -0.69
SP140-207ENST00000456542 ITGA6P23229 1130 aa10.71□□□□□ -0.69
SP140-207ENST00000456542 FAM161AQ3B820 660 aa10.71□□□□□ -0.69
SP140-207ENST00000456542 ZKSCAN2Q63HK3 967 aa10.71□□□□□ -0.69
SP140-207ENST00000456542 INTS3Q68E01 1043 aaKnown RBP10.71□□□□□ -0.69
SP140-207ENST00000456542 SLC51AQ86UW1 340 aa10.71□□□□□ -0.69
SP140-207ENST00000456542 FRAT1Q92837 279 aaPredicted RBP10.71□□□□□ -0.69
SP140-207ENST00000456542 GPBP1L1Q9HC44 474 aaPredicted RBP10.71□□□□□ -0.69
SP140-207ENST00000456542 BSDC1Q9NW68 430 aaPredicted RBP10.71□□□□□ -0.69
SP140-207ENST00000456542 PODXL2Q9NZ53 605 aa10.71□□□□□ -0.69
SP140-207ENST00000456542 WDR90Q96KV7 1748 aa10.7□□□□□ -0.7
SP140-207ENST00000456542 KDM2BQ8NHM5 1336 aa10.7□□□□□ -0.7
SP140-207ENST00000456542 ANKRD18BA2A2Z9 1011 aa10.7□□□□□ -0.7
SP140-207ENST00000456542 IGHMBP2P38935 993 aaKnown RBP10.7□□□□□ -0.7
SP140-207ENST00000456542 IFIT5Q13325 482 aaKnown RBP10.7□□□□□ -0.7
SP140-207ENST00000456542 RABL6Q3YEC7 729 aaPredicted RBP10.7□□□□□ -0.7
SP140-207ENST00000456542 EPHA10Q5JZY3 1008 aa10.7□□□□□ -0.7
SP140-207ENST00000456542 IFFO2Q5TF58 517 aa10.7□□□□□ -0.7
SP140-207ENST00000456542 LMBR1LQ6UX01 489 aa10.7□□□□□ -0.7
SP140-207ENST00000456542 JDP2Q8WYK2 163 aa10.7□□□□□ -0.7
SP140-207ENST00000456542 KAZALD1Q96I82 304 aa10.7□□□□□ -0.7
SP140-207ENST00000456542 SUCLG2Q96I99 432 aa10.7□□□□□ -0.7
SP140-207ENST00000456542 NSFL1CQ9UNZ2 370 aaKnown RBP10.7□□□□□ -0.7
SP140-207ENST00000456542 HDAC5Q9UQL6 1122 aa10.7□□□□□ -0.7
SP140-207ENST00000456542 COL4A5P29400 1685 aa10.69□□□□□ -0.7
SP140-207ENST00000456542 XDHP47989 1333 aa10.69□□□□□ -0.7
SP140-207ENST00000456542 GLTPD2A6NH11 291 aa10.69□□□□□ -0.7
SP140-207ENST00000456542 PPIP5K2O43314 1243 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms