RNA–Protein interactions for RNA: ENST00000456433.5

PMPCB-206, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-206ENST00000456433 RBM17Q96I25 401 aaKnown RBP21.53■■□□□ 1.04
PMPCB-206ENST00000456433 CACNA1SQ13698 1873 aa21.53■■□□□ 1.04
PMPCB-206ENST00000456433 CSF1RP07333 972 aa21.52■■□□□ 1.04
PMPCB-206ENST00000456433 CCDC152Q4G0S7 254 aa21.52■■□□□ 1.04
PMPCB-206ENST00000456433 TTLL11Q8NHH1 800 aa21.52■■□□□ 1.04
PMPCB-206ENST00000456433 ZNF622Q969S3 477 aaKnown RBP eCLIP21.52■■□□□ 1.044e-7■□□□□ 9.1
PMPCB-206ENST00000456433 UTRNP46939 3433 aa21.52■■□□□ 1.04
PMPCB-206ENST00000456433 PLIN1O60240 522 aa21.5■■□□□ 1.03
PMPCB-206ENST00000456433 RRP1P56182 461 aaKnown RBP21.5■■□□□ 1.03
PMPCB-206ENST00000456433 FOXO4P98177 505 aa21.5■■□□□ 1.03
PMPCB-206ENST00000456433 DDX46Q7L014 1031 aaKnown RBP21.5■■□□□ 1.03
PMPCB-206ENST00000456433 PANK1Q8TE04 598 aa21.5■■□□□ 1.03
PMPCB-206ENST00000456433 KAZALD1Q96I82 304 aa21.5■■□□□ 1.03
PMPCB-206ENST00000456433 SUCLG2Q96I99 432 aa21.5■■□□□ 1.03
PMPCB-206ENST00000456433 HDAC5Q9UQL6 1122 aa21.5■■□□□ 1.03
PMPCB-206ENST00000456433 GNAI3P08754 354 aa21.49■■□□□ 1.03
PMPCB-206ENST00000456433 UBTFL1P0CB47 393 aaPredicted RBP21.49■■□□□ 1.03
PMPCB-206ENST00000456433 RABL6Q3YEC7 729 aaPredicted RBP21.49■■□□□ 1.03
PMPCB-206ENST00000456433 PRPF40BQ6NWY9 871 aaKnown RBP21.49■■□□□ 1.03
PMPCB-206ENST00000456433 MEIS3Q99687 375 aa21.49■■□□□ 1.03
PMPCB-206ENST00000456433 TAF1P21675 1872 aa21.49■■□□□ 1.03
PMPCB-206ENST00000456433 YBX3P16989 372 aaKnown RBP eCLIP21.48■■□□□ 1.03
PMPCB-206ENST00000456433 GRAPQ13588 217 aa21.48■■□□□ 1.03
PMPCB-206ENST00000456433 EPHA10Q5JZY3 1008 aa21.48■■□□□ 1.03
PMPCB-206ENST00000456433 GRAPLQ8TC17 118 aaPredicted RBP21.48■■□□□ 1.03
PMPCB-206ENST00000456433 BCS1LQ9Y276 419 aa21.48■■□□□ 1.03
PMPCB-206ENST00000456433 ITPRIPQ8IWB1 547 aa21.47■■□□□ 1.03
PMPCB-206ENST00000456433 C7orf43Q8WVR3 580 aa21.47■■□□□ 1.03
PMPCB-206ENST00000456433 BBOX1O75936 387 aa21.46■■□□□ 1.03
PMPCB-206ENST00000456433 MVPQ14764 893 aaKnown RBP21.46■■□□□ 1.03
PMPCB-206ENST00000456433 TMC4Q7Z404 712 aa21.46■■□□□ 1.03
PMPCB-206ENST00000456433 ANKRD44Q8N8A2 993 aa21.46■■□□□ 1.03
PMPCB-206ENST00000456433 GREM2Q9H772 168 aa21.46■■□□□ 1.03
PMPCB-206ENST00000456433 COL4A1P02462 1669 aa21.46■■□□□ 1.03
PMPCB-206ENST00000456433 LRRC37AA6NMS7 1700 aa21.46■■□□□ 1.03
PMPCB-206ENST00000456433 ZBTB7BO15156 539 aaPredicted RBP21.45■■□□□ 1.02
PMPCB-206ENST00000456433 GRIN3BO60391 1043 aa21.45■■□□□ 1.02
PMPCB-206ENST00000456433 GPR162Q16538 588 aa21.45■■□□□ 1.02
PMPCB-206ENST00000456433 SOGA3Q5TF21 947 aa21.45■■□□□ 1.02
PMPCB-206ENST00000456433 LMBR1LQ6UX01 489 aa21.45■■□□□ 1.02
PMPCB-206ENST00000456433 BICC1Q9H694 974 aaKnown RBP21.45■■□□□ 1.02
PMPCB-206ENST00000456433 DDX19BQ9UMR2 479 aa21.45■■□□□ 1.02
PMPCB-206ENST00000456433 FER1L6Q2WGJ9 1857 aa21.44■■□□□ 1.02
PMPCB-206ENST00000456433 FAM161AQ3B820 660 aa21.44■■□□□ 1.02
PMPCB-206ENST00000456433 C20orf194Q5TEA3 1177 aa21.44■■□□□ 1.02
PMPCB-206ENST00000456433 CC2D2BQ6DHV5 1058 aa21.44■■□□□ 1.02
PMPCB-206ENST00000456433 CELF1Q92879 486 aaKnown RBP21.44■■□□□ 1.02
PMPCB-206ENST00000456433 CDC5LQ99459 802 aaKnown RBP21.44■■□□□ 1.02
PMPCB-206ENST00000456433 SEC31BQ9NQW1 1179 aa21.44■■□□□ 1.02
PMPCB-206ENST00000456433 WWC3Q9ULE0 1092 aa21.44■■□□□ 1.02
PMPCB-206ENST00000456433 SNED1Q8TER0 1413 aa21.44■■□□□ 1.02
PMPCB-206ENST00000456433 DCAF8L1A6NGE4 600 aa21.43■■□□□ 1.02
PMPCB-206ENST00000456433 PPEF1O14829 653 aaPredicted RBP21.43■■□□□ 1.02
PMPCB-206ENST00000456433 ITGA6P23229 1130 aa21.43■■□□□ 1.02
PMPCB-206ENST00000456433 RPS8P62241 208 aaKnown RBP21.43■■□□□ 1.02
PMPCB-206ENST00000456433 CCDC85AQ96PX6 553 aaPredicted RBP21.43■■□□□ 1.02
PMPCB-206ENST00000456433 LRRFIP2Q9Y608 721 aaKnown RBP21.43■■□□□ 1.02
PMPCB-206ENST00000456433 GNAI2P04899 355 aa21.42■■□□□ 1.02
PMPCB-206ENST00000456433 GRIPAP1Q4V328 841 aa21.42■■□□□ 1.02
PMPCB-206ENST00000456433 PELP1Q8IZL8 1130 aaKnown RBP21.42■■□□□ 1.02
PMPCB-206ENST00000456433 CHMP4BQ9H444 224 aaKnown RBP21.42■■□□□ 1.02
PMPCB-206ENST00000456433 COG6Q9Y2V7 657 aa21.42■■□□□ 1.02
PMPCB-206ENST00000456433 ATP6V0A2Q9Y487 856 aa21.42■■□□□ 1.02
PMPCB-206ENST00000456433 C21orf2O43822 256 aa21.41■■□□□ 1.02
PMPCB-206ENST00000456433 MTX1Q13505 466 aa21.41■■□□□ 1.02
PMPCB-206ENST00000456433 SP8Q8IXZ3 490 aa21.41■■□□□ 1.02
PMPCB-206ENST00000456433 ANKRD18BA2A2Z9 1011 aa21.4■■□□□ 1.02
PMPCB-206ENST00000456433 IFIT5Q13325 482 aaKnown RBP21.4■■□□□ 1.02
PMPCB-206ENST00000456433 CCDC93Q567U6 631 aa21.4■■□□□ 1.02
PMPCB-206ENST00000456433 ANKRD18AQ8IVF6 992 aa21.4■■□□□ 1.02
PMPCB-206ENST00000456433 SPEF2Q9C093 1822 aa21.4■■□□□ 1.02
PMPCB-206ENST00000456433 CCDC57Q2TAC2 916 aa21.39■■□□□ 1.01
PMPCB-206ENST00000456433 BSDC1Q9NW68 430 aaPredicted RBP21.39■■□□□ 1.01
PMPCB-206ENST00000456433 CHMP3Q9Y3E7 222 aa21.39■■□□□ 1.01
PMPCB-206ENST00000456433 LTBP3Q9NS15 1303 aa21.38■■□□□ 1.01
PMPCB-206ENST00000456433 RTKN2Q8IZC4 609 aa21.38■■□□□ 1.01
PMPCB-206ENST00000456433 ZBTB40Q9NUA8 1239 aa21.38■■□□□ 1.01
PMPCB-206ENST00000456433 LTBP1Q14766 1721 aa21.38■■□□□ 1.01
PMPCB-206ENST00000456433 IGHMBP2P38935 993 aaKnown RBP21.37■■□□□ 1.01
PMPCB-206ENST00000456433 CHD4Q14839 1912 aa21.36■■□□□ 1.01
PMPCB-206ENST00000456433 RFX5P48382 616 aaPredicted RBP21.36■■□□□ 1.01
PMPCB-206ENST00000456433 OLFM4Q6UX06 510 aa21.36■■□□□ 1.01
PMPCB-206ENST00000456433 TMX4Q9H1E5 349 aaPredicted RBP21.36■■□□□ 1.01
PMPCB-206ENST00000456433 SUPT16HQ9Y5B9 1047 aaKnown RBP21.36■■□□□ 1.01
PMPCB-206ENST00000456433 SBF1O95248 1867 aa21.36■■□□□ 1.01
PMPCB-206ENST00000456433 NFKBIEO00221 500 aa21.35■■□□□ 1.01
PMPCB-206ENST00000456433 PSMD1Q99460 953 aa21.35■■□□□ 1.01
PMPCB-206ENST00000456433 ZNF219Q9P2Y4 722 aaPredicted RBP21.35■■□□□ 1.01
PMPCB-206ENST00000456433 A0A1B0GUL6 1792 aa21.34■■□□□ 1.01
PMPCB-206ENST00000456433 ARHGAP27Q6ZUM4 889 aa21.34■■□□□ 1.01
PMPCB-206ENST00000456433 MPHOSPH8Q99549 860 aa21.34■■□□□ 1.01
PMPCB-206ENST00000456433 RTFDC1Q9BY42 306 aaPredicted RBP21.34■■□□□ 1.01
PMPCB-206ENST00000456433 PODXL2Q9NZ53 605 aa21.34■■□□□ 1.01
PMPCB-206ENST00000456433 DUOX1Q9NRD9 1551 aa21.33■■□□□ 1.01
PMPCB-206ENST00000456433 FKBP4Q02790 459 aaKnown RBP eCLIP21.33■■□□□ 1.01
PMPCB-206ENST00000456433 TAF7LQ5H9L4 462 aa21.33■■□□□ 1.01
PMPCB-206ENST00000456433 SLC51AQ86UW1 340 aa21.33■■□□□ 1.01
PMPCB-206ENST00000456433 TAOK3Q9H2K8 898 aa21.33■■□□□ 1.01
PMPCB-206ENST00000456433 FBXO3Q9UK99 471 aa21.33■■□□□ 1.01
PMPCB-206ENST00000456433 MINPP1Q9UNW1 487 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms