RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 PLIN1O60240 522 aa23.55■■□□□ 1.36
SBDSP1-205ENST00000456312 YBX3P16989 372 aaKnown RBP eCLIP23.55■■□□□ 1.36
SBDSP1-205ENST00000456312 FOXO4P98177 505 aa23.55■■□□□ 1.36
SBDSP1-205ENST00000456312 EPHA10Q5JZY3 1008 aa23.55■■□□□ 1.36
SBDSP1-205ENST00000456312 CHD4Q14839 1912 aa23.55■■□□□ 1.36
SBDSP1-205ENST00000456312 CSF1RP07333 972 aa23.54■■□□□ 1.36
SBDSP1-205ENST00000456312 CTSWP56202 376 aa23.54■■□□□ 1.36
SBDSP1-205ENST00000456312 TTLL11Q8NHH1 800 aa23.54■■□□□ 1.36
SBDSP1-205ENST00000456312 SUCLG2Q96I99 432 aa23.54■■□□□ 1.36
SBDSP1-205ENST00000456312 CRAMP1Q96RY5 1269 aa23.54■■□□□ 1.36
SBDSP1-205ENST00000456312 C9orf78Q9NZ63 289 aaPredicted RBP23.54■■□□□ 1.36
SBDSP1-205ENST00000456312 HSP90B1P14625 803 aaKnown RBP23.53■■□□□ 1.36
SBDSP1-205ENST00000456312 C7orf43Q8WVR3 580 aa23.53■■□□□ 1.36
SBDSP1-205ENST00000456312 TTLL6Q8N841 843 aa23.52■■□□□ 1.36
SBDSP1-205ENST00000456312 PANK1Q8TE04 598 aa23.52■■□□□ 1.36
SBDSP1-205ENST00000456312 MEIS3Q99687 375 aa23.52■■□□□ 1.36
SBDSP1-205ENST00000456312 RABL6Q3YEC7 729 aaPredicted RBP23.51■■□□□ 1.35
SBDSP1-205ENST00000456312 PRPF40BQ6NWY9 871 aaKnown RBP23.51■■□□□ 1.35
SBDSP1-205ENST00000456312 CNKSR1Q969H4 720 aa23.51■■□□□ 1.35
SBDSP1-205ENST00000456312 ZNF622Q969S3 477 aaKnown RBP eCLIP23.51■■□□□ 1.35
SBDSP1-205ENST00000456312 DICER1Q9UPY3 1922 aaKnown RBP23.51■■□□□ 1.35
SBDSP1-205ENST00000456312 RRP1P56182 461 aaKnown RBP23.5■■□□□ 1.35
SBDSP1-205ENST00000456312 PDE3AQ14432 1141 aa23.5■■□□□ 1.35
SBDSP1-205ENST00000456312 DALRD3Q5D0E6 543 aaKnown RBP23.5■■□□□ 1.35
SBDSP1-205ENST00000456312 C20orf194Q5TEA3 1177 aa23.5■■□□□ 1.35
SBDSP1-205ENST00000456312 ANKRD44Q8N8A2 993 aa23.5■■□□□ 1.35
SBDSP1-205ENST00000456312 RPGRQ92834 1020 aaKnown RBP23.5■■□□□ 1.35
SBDSP1-205ENST00000456312 WWC3Q9ULE0 1092 aa23.5■■□□□ 1.35
SBDSP1-205ENST00000456312 ALDH1B1P30837 517 aa23.49■■□□□ 1.35
SBDSP1-205ENST00000456312 SLC51AQ86UW1 340 aa23.49■■□□□ 1.35
SBDSP1-205ENST00000456312 FTSJ3Q8IY81 847 aaKnown RBP23.49■■□□□ 1.35
SBDSP1-205ENST00000456312 RBM17Q96I25 401 aaKnown RBP23.49■■□□□ 1.35
SBDSP1-205ENST00000456312 GRAPQ13588 217 aa23.48■■□□□ 1.35
SBDSP1-205ENST00000456312 CCDC152Q4G0S7 254 aa23.48■■□□□ 1.35
SBDSP1-205ENST00000456312 GRAPLQ8TC17 118 aaPredicted RBP23.48■■□□□ 1.35
SBDSP1-205ENST00000456312 CELF1Q92879 486 aaKnown RBP23.48■■□□□ 1.35
SBDSP1-205ENST00000456312 GREM2Q9H772 168 aa23.48■■□□□ 1.35
SBDSP1-205ENST00000456312 SEC31BQ9NQW1 1179 aa23.48■■□□□ 1.35
SBDSP1-205ENST00000456312 BCS1LQ9Y276 419 aa23.48■■□□□ 1.35
SBDSP1-205ENST00000456312 ZBTB7BO15156 539 aaPredicted RBP23.47■■□□□ 1.35
SBDSP1-205ENST00000456312 MS4A1P11836 297 aa23.47■■□□□ 1.35
SBDSP1-205ENST00000456312 BICC1Q9H694 974 aaKnown RBP23.47■■□□□ 1.35
SBDSP1-205ENST00000456312 DUOX1Q9NRD9 1551 aa23.47■■□□□ 1.35
SBDSP1-205ENST00000456312 MVPQ14764 893 aaKnown RBP23.46■■□□□ 1.35
SBDSP1-205ENST00000456312 FAM161AQ3B820 660 aa23.46■■□□□ 1.35
SBDSP1-205ENST00000456312 DDX46Q7L014 1031 aaKnown RBP23.46■■□□□ 1.35
SBDSP1-205ENST00000456312 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.46■■□□□ 1.35
SBDSP1-205ENST00000456312 UBTFL1P0CB47 393 aaPredicted RBP23.45■■□□□ 1.34
SBDSP1-205ENST00000456312 LMBR1LQ6UX01 489 aa23.45■■□□□ 1.34
SBDSP1-205ENST00000456312 CCDC85AQ96PX6 553 aaPredicted RBP23.45■■□□□ 1.34
SBDSP1-205ENST00000456312 GNAI3P08754 354 aa23.44■■□□□ 1.34
SBDSP1-205ENST00000456312 ITPRIPQ8IWB1 547 aa23.44■■□□□ 1.34
SBDSP1-205ENST00000456312 BBOX1O75936 387 aa23.43■■□□□ 1.34
SBDSP1-205ENST00000456312 COG6Q9Y2V7 657 aa23.43■■□□□ 1.34
SBDSP1-205ENST00000456312 LRRFIP2Q9Y608 721 aaKnown RBP23.43■■□□□ 1.34
SBDSP1-205ENST00000456312 PPEF1O14829 653 aaPredicted RBP23.42■■□□□ 1.34
SBDSP1-205ENST00000456312 C21orf2O43822 256 aa23.42■■□□□ 1.34
SBDSP1-205ENST00000456312 ITGA6P23229 1130 aa23.42■■□□□ 1.34
SBDSP1-205ENST00000456312 OLFM4Q6UX06 510 aa23.42■■□□□ 1.34
SBDSP1-205ENST00000456312 RPS8P62241 208 aaKnown RBP23.41■■□□□ 1.34
SBDSP1-205ENST00000456312 MTX1Q13505 466 aa23.41■■□□□ 1.34
SBDSP1-205ENST00000456312 GPR162Q16538 588 aa23.41■■□□□ 1.34
SBDSP1-205ENST00000456312 ATP6V0A2Q9Y487 856 aa23.41■■□□□ 1.34
SBDSP1-205ENST00000456312 NFKBIEO00221 500 aa23.4■■□□□ 1.34
SBDSP1-205ENST00000456312 RFX5P48382 616 aaPredicted RBP23.4■■□□□ 1.34
SBDSP1-205ENST00000456312 TMC4Q7Z404 712 aa23.4■■□□□ 1.34
SBDSP1-205ENST00000456312 TIAM2Q8IVF5 1701 aa23.39■■□□□ 1.34
SBDSP1-205ENST00000456312 SP8Q8IXZ3 490 aa23.39■■□□□ 1.33
SBDSP1-205ENST00000456312 PELP1Q8IZL8 1130 aaKnown RBP23.39■■□□□ 1.33
SBDSP1-205ENST00000456312 CDC5LQ99459 802 aaKnown RBP23.39■■□□□ 1.33
SBDSP1-205ENST00000456312 DDX19BQ9UMR2 479 aa23.39■■□□□ 1.33
SBDSP1-205ENST00000456312 LTBP3Q9NS15 1303 aa23.38■■□□□ 1.33
SBDSP1-205ENST00000456312 GRIN3BO60391 1043 aa23.38■■□□□ 1.33
SBDSP1-205ENST00000456312 GNAI2P04899 355 aa23.38■■□□□ 1.33
SBDSP1-205ENST00000456312 PRELPP51888 382 aa23.38■■□□□ 1.33
SBDSP1-205ENST00000456312 ZBTB40Q9NUA8 1239 aa23.38■■□□□ 1.33
SBDSP1-205ENST00000456312 ANKRD18BA2A2Z9 1011 aa23.37■■□□□ 1.33
SBDSP1-205ENST00000456312 IFIT5Q13325 482 aaKnown RBP23.37■■□□□ 1.33
SBDSP1-205ENST00000456312 CCDC93Q567U6 631 aa23.37■■□□□ 1.33
SBDSP1-205ENST00000456312 SOGA3Q5TF21 947 aa23.37■■□□□ 1.33
SBDSP1-205ENST00000456312 CC2D2BQ6DHV5 1058 aa23.37■■□□□ 1.33
SBDSP1-205ENST00000456312 ANKRD18AQ8IVF6 992 aa23.37■■□□□ 1.33
SBDSP1-205ENST00000456312 BSDC1Q9NW68 430 aaPredicted RBP23.37■■□□□ 1.33
SBDSP1-205ENST00000456312 HDAC5Q9UQL6 1122 aa23.37■■□□□ 1.33
SBDSP1-205ENST00000456312 ZNF219Q9P2Y4 722 aaPredicted RBP23.36■■□□□ 1.33
SBDSP1-205ENST00000456312 SUPT16HQ9Y5B9 1047 aaKnown RBP23.36■■□□□ 1.33
SBDSP1-205ENST00000456312 ZNF594Q96JF6 807 aaPredicted RBP23.35■■□□□ 1.33
SBDSP1-205ENST00000456312 COL4A5P29400 1685 aa23.35■■□□□ 1.33
SBDSP1-205ENST00000456312 CCDC57Q2TAC2 916 aa23.34■■□□□ 1.33
SBDSP1-205ENST00000456312 C1orf115Q9H7X2 142 aa23.34■■□□□ 1.33
SBDSP1-205ENST00000456312 CHMP3Q9Y3E7 222 aa23.34■■□□□ 1.33
SBDSP1-205ENST00000456312 PSME4Q14997 1843 aa23.33■■□□□ 1.33
SBDSP1-205ENST00000456312 RASSF7Q02833 373 aa23.33■■□□□ 1.33
SBDSP1-205ENST00000456312 PTPN12Q05209 780 aaKnown RBP23.33■■□□□ 1.33
SBDSP1-205ENST00000456312 PSMD1Q99460 953 aa23.33■■□□□ 1.33
SBDSP1-205ENST00000456312 RTFDC1Q9BY42 306 aaPredicted RBP23.33■■□□□ 1.33
SBDSP1-205ENST00000456312 ZNF646O15015 1829 aaPredicted RBP23.33■■□□□ 1.32
SBDSP1-205ENST00000456312 PNMA6EA0A0J9YXQ4 647 aa23.32■■□□□ 1.32
SBDSP1-205ENST00000456312 IGHMBP2P38935 993 aaKnown RBP23.32■■□□□ 1.32
SBDSP1-205ENST00000456312 GRIPAP1Q4V328 841 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms