RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 IARSP41252 1262 aaKnown RBP31.73■■■□□ 2.67
MSH2-203ENST00000454849 TMX4Q9H1E5 349 aaPredicted RBP31.73■■■□□ 2.67
MSH2-203ENST00000454849 SEC31BQ9NQW1 1179 aa31.73■■■□□ 2.67
MSH2-203ENST00000454849 UBE3BQ7Z3V4 1068 aa31.72■■■□□ 2.67
MSH2-203ENST00000454849 ZC3H4Q9UPT8 1303 aaKnown RBP31.72■■■□□ 2.67
MSH2-203ENST00000454849 COL4A1P02462 1669 aa31.71■■■□□ 2.67
MSH2-203ENST00000454849 PDE8AO60658 829 aa31.71■■■□□ 2.67
MSH2-203ENST00000454849 SP8Q8IXZ3 490 aa31.71■■■□□ 2.67
MSH2-203ENST00000454849 PSMD1Q99460 953 aa31.71■■■□□ 2.67
MSH2-203ENST00000454849 BCL2L13Q9BXK5 485 aa31.71■■■□□ 2.67
MSH2-203ENST00000454849 GCKRQ14397 625 aa31.7■■■□□ 2.67
MSH2-203ENST00000454849 DDNO94850 711 aaPredicted RBP31.69■■■□□ 2.66
MSH2-203ENST00000454849 DPY19L2Q6NUT2 758 aa31.69■■■□□ 2.66
MSH2-203ENST00000454849 TRMT2AQ8IZ69 625 aaKnown RBP31.68■■■□□ 2.66
MSH2-203ENST00000454849 MRPL50Q8N5N7 158 aaKnown RBP31.68■■■□□ 2.66
MSH2-203ENST00000454849 LINS1Q8NG48 757 aa31.68■■■□□ 2.66
MSH2-203ENST00000454849 SSH1Q8WYL5 1049 aa31.68■■■□□ 2.66
MSH2-203ENST00000454849 DICER1Q9UPY3 1922 aaKnown RBP31.68■■■□□ 2.66
MSH2-203ENST00000454849 H7C1W4 665 aa31.67■■■□□ 2.66
MSH2-203ENST00000454849 SLC4A10Q6U841 1118 aa31.67■■■□□ 2.66
MSH2-203ENST00000454849 DPP8Q6V1X1 898 aaPredicted RBP31.67■■■□□ 2.66
MSH2-203ENST00000454849 MPNDQ8N594 471 aa31.67■■■□□ 2.66
MSH2-203ENST00000454849 ZNF541Q9H0D2 1346 aa31.67■■■□□ 2.66
MSH2-203ENST00000454849 CACNA1FO60840 1977 aa31.67■■■□□ 2.66
MSH2-203ENST00000454849 HSP90B1P14625 803 aaKnown RBP31.66■■■□□ 2.66
MSH2-203ENST00000454849 RPS8P62241 208 aaKnown RBP31.66■■■□□ 2.66
MSH2-203ENST00000454849 CCDC152Q4G0S7 254 aa31.66■■■□□ 2.66
MSH2-203ENST00000454849 LARGE2Q8N3Y3 721 aa31.66■■■□□ 2.66
MSH2-203ENST00000454849 CDHR2Q9BYE9 1310 aa31.66■■■□□ 2.66
MSH2-203ENST00000454849 AOC3Q16853 763 aa31.65■■■□□ 2.66
MSH2-203ENST00000454849 BEND3Q5T5X7 828 aa31.65■■■□□ 2.66
MSH2-203ENST00000454849 C16orf71Q8IYS4 520 aaPredicted RBP31.65■■■□□ 2.66
MSH2-203ENST00000454849 COL4A5P29400 1685 aa31.64■■■□□ 2.66
MSH2-203ENST00000454849 CTSWP56202 376 aa31.64■■■□□ 2.66
MSH2-203ENST00000454849 GRIPAP1Q4V328 841 aa31.64■■■□□ 2.66
MSH2-203ENST00000454849 POTECB2RU33 542 aa31.63■■■□□ 2.65
MSH2-203ENST00000454849 PPIP5K2O43314 1243 aa31.63■■■□□ 2.65
MSH2-203ENST00000454849 HNRNPUQ00839 825 aaKnown RBP eCLIP31.63■■■□□ 2.65
MSH2-203ENST00000454849 JDP2Q8WYK2 163 aa31.63■■■□□ 2.65
MSH2-203ENST00000454849 TTLL11Q8NHH1 800 aa31.62■■■□□ 2.65
MSH2-203ENST00000454849 NSFL1CQ9UNZ2 370 aaKnown RBP31.62■■■□□ 2.65
MSH2-203ENST00000454849 TOMM70O94826 608 aa31.61■■■□□ 2.65
MSH2-203ENST00000454849 VEGFAP15692 232 aaPredicted RBP31.61■■■□□ 2.65
MSH2-203ENST00000454849 CASP7P55210 303 aa31.61■■■□□ 2.65
MSH2-203ENST00000454849 GPSM2P81274 684 aa31.61■■■□□ 2.65
MSH2-203ENST00000454849 GREM2Q9H772 168 aa31.61■■■□□ 2.65
MSH2-203ENST00000454849 FZD9O00144 591 aa31.59■■■□□ 2.65
MSH2-203ENST00000454849 TMC4Q7Z404 712 aa31.59■■■□□ 2.65
MSH2-203ENST00000454849 GPR101Q96P66 508 aaPredicted RBP31.59■■■□□ 2.65
MSH2-203ENST00000454849 RTFDC1Q9BY42 306 aaPredicted RBP31.59■■■□□ 2.65
MSH2-203ENST00000454849 NIM1KQ8IY84 436 aa31.58■■■□□ 2.65
MSH2-203ENST00000454849 SUPT20HQ8NEM7 779 aa31.58■■■□□ 2.65
MSH2-203ENST00000454849 SMC4Q9NTJ3 1288 aa31.58■■■□□ 2.65
MSH2-203ENST00000454849 GJA3Q9Y6H8 435 aa31.58■■■□□ 2.65
MSH2-203ENST00000454849 ANKRD18AQ8IVF6 992 aa31.57■■■□□ 2.64
MSH2-203ENST00000454849 C6orf229H3BNL8 230 aa31.56■■■□□ 2.64
MSH2-203ENST00000454849 POLLQ9UGP5 575 aa31.56■■■□□ 2.64
MSH2-203ENST00000454849 RIMBP2O15034 1052 aa31.55■■■□□ 2.64
MSH2-203ENST00000454849 SRCIN1Q9C0H9 1055 aa31.55■■■□□ 2.64
MSH2-203ENST00000454849 EIF6P56537 245 aaKnown RBP31.54■■■□□ 2.64
MSH2-203ENST00000454849 FAM161AQ3B820 660 aa31.53■■■□□ 2.64
MSH2-203ENST00000454849 PLA2G12BQ9BX93 195 aa31.53■■■□□ 2.64
MSH2-203ENST00000454849 C9orf78Q9NZ63 289 aaPredicted RBP31.53■■■□□ 2.64
MSH2-203ENST00000454849 ANKIB1Q9P2G1 1089 aa31.53■■■□□ 2.64
MSH2-203ENST00000454849 KIAA2012Q0VF49 1180 aa31.52■■■□□ 2.64
MSH2-203ENST00000454849 ALDH1L2Q3SY69 923 aa31.52■■■□□ 2.64
MSH2-203ENST00000454849 RBM46Q8TBY0 533 aaKnown RBP31.52■■■□□ 2.64
MSH2-203ENST00000454849 DUOX1Q9NRD9 1551 aa31.51■■■□□ 2.64
MSH2-203ENST00000454849 GRM8O00222 908 aa31.51■■■□□ 2.63
MSH2-203ENST00000454849 ALDH1L1O75891 902 aa31.51■■■□□ 2.63
MSH2-203ENST00000454849 EPHA10Q5JZY3 1008 aa31.51■■■□□ 2.63
MSH2-203ENST00000454849 CDC5LQ99459 802 aaKnown RBP31.51■■■□□ 2.63
MSH2-203ENST00000454849 CHMP3Q9Y3E7 222 aa31.51■■■□□ 2.63
MSH2-203ENST00000454849 WDR90Q96KV7 1748 aa31.51■■■□□ 2.63
MSH2-203ENST00000454849 WTIPA6NIX2 430 aaPredicted RBP31.5■■■□□ 2.63
MSH2-203ENST00000454849 POTEIP0CG38 1075 aa31.5■■■□□ 2.63
MSH2-203ENST00000454849 POTEJP0CG39 1038 aa31.5■■■□□ 2.63
MSH2-203ENST00000454849 ITGA6P23229 1130 aa31.5■■■□□ 2.63
MSH2-203ENST00000454849 FOXO4P98177 505 aa31.5■■■□□ 2.63
MSH2-203ENST00000454849 WASHC4Q2M389 1173 aa31.5■■■□□ 2.63
MSH2-203ENST00000454849 TBC1D16Q8TBP0 767 aa31.5■■■□□ 2.63
MSH2-203ENST00000454849 ZNRF3Q9ULT6 936 aa31.5■■■□□ 2.63
MSH2-203ENST00000454849 PTPRCP08575 1304 aa31.49■■■□□ 2.63
MSH2-203ENST00000454849 LRRC37AA6NMS7 1700 aa31.49■■■□□ 2.63
MSH2-203ENST00000454849 CSF1RP07333 972 aa31.49■■■□□ 2.63
MSH2-203ENST00000454849 GPC2Q8N158 579 aa31.49■■■□□ 2.63
MSH2-203ENST00000454849 L3MBTL3Q96JM7 780 aaPredicted RBP31.49■■■□□ 2.63
MSH2-203ENST00000454849 NOB1Q9ULX3 412 aaKnown RBP31.49■■■□□ 2.63
MSH2-203ENST00000454849 RAD17O75943 681 aa31.48■■■□□ 2.63
MSH2-203ENST00000454849 UFL1O94874 794 aa31.48■■■□□ 2.63
MSH2-203ENST00000454849 DOK7Q18PE1 504 aa31.48■■■□□ 2.63
MSH2-203ENST00000454849 VPS33BQ9H267 617 aa31.48■■■□□ 2.63
MSH2-203ENST00000454849 CXCL9Q07325 125 aa31.47■■■□□ 2.63
MSH2-203ENST00000454849 DBNDD1Q9H9R9 158 aa31.47■■■□□ 2.63
MSH2-203ENST00000454849 MYH3P11055 1940 aa31.47■■■□□ 2.63
MSH2-203ENST00000454849 NBPF7P0C2Y1 421 aaPredicted RBP31.46■■■□□ 2.63
MSH2-203ENST00000454849 HSPA6P17066 643 aa31.46■■■□□ 2.63
MSH2-203ENST00000454849 RARSP54136 660 aaKnown RBP31.46■■■□□ 2.63
MSH2-203ENST00000454849 LMBR1LQ6UX01 489 aa31.46■■■□□ 2.63
MSH2-203ENST00000454849 TAF1DQ9H5J8 278 aaPredicted RBP31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms