RNA–Protein interactions for RNA: ENST00000454786.5

UBE2F-218, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 1,292 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-218ENST00000454786 CDHR2Q9BYE9 1310 aa22.47■■□□□ 1.19
UBE2F-218ENST00000454786 PSME4Q14997 1843 aa22.47■■□□□ 1.19
UBE2F-218ENST00000454786 LBX1P52954 281 aa22.46■■□□□ 1.19
UBE2F-218ENST00000454786 CXCL9Q07325 125 aa22.46■■□□□ 1.19
UBE2F-218ENST00000454786 GRAPQ13588 217 aa22.46■■□□□ 1.19
UBE2F-218ENST00000454786 PAXIP1Q6ZW49 1069 aaPredicted RBP22.46■■□□□ 1.19
UBE2F-218ENST00000454786 GRAPLQ8TC17 118 aaPredicted RBP22.46■■□□□ 1.19
UBE2F-218ENST00000454786 MYH3P11055 1940 aa22.45■■□□□ 1.18
UBE2F-218ENST00000454786 FMR1Q06787 632 aaKnown RBP eCLIP22.45■■□□□ 1.183e-6■■■■□ 23.7
UBE2F-218ENST00000454786 KIAA2012Q0VF49 1180 aa22.45■■□□□ 1.18
UBE2F-218ENST00000454786 KRT24Q2M2I5 525 aa22.45■■□□□ 1.18
UBE2F-218ENST00000454786 CHPF2Q9P2E5 772 aa22.45■■□□□ 1.18
UBE2F-218ENST00000454786 LAS1LQ9Y4W2 734 aaKnown RBP22.45■■□□□ 1.18
UBE2F-218ENST00000454786 TRAF5O00463 557 aa22.44■■□□□ 1.18
UBE2F-218ENST00000454786 CHL1O00533 1208 aa22.44■■□□□ 1.18
UBE2F-218ENST00000454786 ECE1P42892 770 aa22.44■■□□□ 1.18
UBE2F-218ENST00000454786 GMPSP49915 693 aaPredicted RBP22.44■■□□□ 1.18
UBE2F-218ENST00000454786 HDGFL1Q5TGJ6 251 aa22.44■■□□□ 1.18
UBE2F-218ENST00000454786 CIAPIN1Q6FI81 312 aa22.44■■□□□ 1.18
UBE2F-218ENST00000454786 TMC4Q7Z404 712 aa22.44■■□□□ 1.18
UBE2F-218ENST00000454786 SPEF2Q9C093 1822 aa22.43■■□□□ 1.18
UBE2F-218ENST00000454786 COL4A1P02462 1669 aa22.43■■□□□ 1.18
UBE2F-218ENST00000454786 HSPA8P11142 646 aaKnown RBP22.43■■□□□ 1.18
UBE2F-218ENST00000454786 WDR43Q15061 677 aaKnown RBP eCLIP22.43■■□□□ 1.18
UBE2F-218ENST00000454786 RUNDC1Q96C34 613 aa22.43■■□□□ 1.18
UBE2F-218ENST00000454786 CAPNS2Q96L46 248 aa22.43■■□□□ 1.18
UBE2F-218ENST00000454786 SCN9AQ15858 1988 aa22.42■■□□□ 1.18
UBE2F-218ENST00000454786 HOXB7P09629 217 aa22.42■■□□□ 1.18
UBE2F-218ENST00000454786 TNIP1Q15025 636 aa22.42■■□□□ 1.18
UBE2F-218ENST00000454786 BCL2L13Q9BXK5 485 aa22.42■■□□□ 1.18
UBE2F-218ENST00000454786 TRIM35Q9UPQ4 493 aa22.42■■□□□ 1.18
UBE2F-218ENST00000454786 GRM1Q13255 1194 aa22.41■■□□□ 1.18
UBE2F-218ENST00000454786 CST9Q5W186 159 aa22.41■■□□□ 1.18
UBE2F-218ENST00000454786 CYP4F22Q6NT55 531 aa22.41■■□□□ 1.18
UBE2F-218ENST00000454786 PLBD2Q8NHP8 589 aa22.41■■□□□ 1.18
UBE2F-218ENST00000454786 TLL2Q9Y6L7 1015 aa22.41■■□□□ 1.18
UBE2F-218ENST00000454786 RAD17O75943 681 aa22.4■■□□□ 1.18
UBE2F-218ENST00000454786 DBF4Q9UBU7 674 aaPredicted RBP22.4■■□□□ 1.18
UBE2F-218ENST00000454786 CASP8AP2Q9UKL3 1982 aa22.39■■□□□ 1.18
UBE2F-218ENST00000454786 ZNF428Q96B54 188 aa22.39■■□□□ 1.17
UBE2F-218ENST00000454786 BEGAINQ9BUH8 593 aa22.39■■□□□ 1.17
UBE2F-218ENST00000454786 DDX10Q13206 875 aaKnown RBP22.38■■□□□ 1.17
UBE2F-218ENST00000454786 ANKRD13DQ6ZTN6 518 aa22.38■■□□□ 1.17
UBE2F-218ENST00000454786 GPR101Q96P66 508 aaPredicted RBP22.38■■□□□ 1.17
UBE2F-218ENST00000454786 AKAP11Q9UKA4 1901 aa22.37■■□□□ 1.17
UBE2F-218ENST00000454786 YDJCA8MPS7 323 aa22.37■■□□□ 1.17
UBE2F-218ENST00000454786 CELF2O95319 508 aaKnown RBP22.37■■□□□ 1.17
UBE2F-218ENST00000454786 ZC3H15Q8WU90 426 aaKnown RBP22.37■■□□□ 1.17
UBE2F-218ENST00000454786 FAM89AQ96GI7 184 aa22.37■■□□□ 1.17
UBE2F-218ENST00000454786 ISCA1Q9BUE6 129 aa22.37■■□□□ 1.17
UBE2F-218ENST00000454786 GLIS2Q9BZE0 524 aaPredicted RBP22.37■■□□□ 1.17
UBE2F-218ENST00000454786 HYPKQ9NX55 129 aa22.37■■□□□ 1.17
UBE2F-218ENST00000454786 TRPM4Q8TD43 1214 aa22.36■■□□□ 1.17
UBE2F-218ENST00000454786 PGAP2Q9UHJ9 254 aa22.36■■□□□ 1.17
UBE2F-218ENST00000454786 ATP5J2-PTCD1G3V325 749 aa22.35■■□□□ 1.17
UBE2F-218ENST00000454786 SF3B3Q15393 1217 aaKnown RBP22.35■■□□□ 1.17
UBE2F-218ENST00000454786 SAPCD2Q86UD0 394 aa22.35■■□□□ 1.17
UBE2F-218ENST00000454786 CELF1Q92879 486 aaKnown RBP22.35■■□□□ 1.17
UBE2F-218ENST00000454786 CFAP44Q96MT7 982 aa22.35■■□□□ 1.17
UBE2F-218ENST00000454786 CNOT7Q9UIV1 285 aaKnown RBP22.35■■□□□ 1.17
UBE2F-218ENST00000454786 MAP2K2P36507 400 aa22.34■■□□□ 1.17
UBE2F-218ENST00000454786 WASHC4Q2M389 1173 aa22.34■■□□□ 1.17
UBE2F-218ENST00000454786 MICALL2Q8IY33 904 aa22.34■■□□□ 1.17
UBE2F-218ENST00000454786 ZNF408Q9H9D4 720 aa22.34■■□□□ 1.17
UBE2F-218ENST00000454786 ADAMTS8Q9UP79 889 aa22.34■■□□□ 1.17
UBE2F-218ENST00000454786 H7C1D1 291 aa22.33■■□□□ 1.17
UBE2F-218ENST00000454786 HIRAP54198 1017 aaPredicted RBP22.33■■□□□ 1.17
UBE2F-218ENST00000454786 DUSP27Q5VZP5 1158 aa22.33■■□□□ 1.17
UBE2F-218ENST00000454786 CDC37L1Q7L3B6 337 aa22.33■■□□□ 1.17
UBE2F-218ENST00000454786 HHIPL1Q96JK4 782 aa22.33■■□□□ 1.17
UBE2F-218ENST00000454786 NSFL1CQ9UNZ2 370 aaKnown RBP22.33■■□□□ 1.17
UBE2F-218ENST00000454786 AOC2O75106 756 aa22.32■■□□□ 1.16
UBE2F-218ENST00000454786 RTL5Q5HYW3 569 aaPredicted RBP22.32■■□□□ 1.16
UBE2F-218ENST00000454786 ABHD8Q96I13 439 aa22.32■■□□□ 1.16
UBE2F-218ENST00000454786 DBNDD1Q9H9R9 158 aa22.32■■□□□ 1.16
UBE2F-218ENST00000454786 MBIPQ9NS73 344 aa22.32■■□□□ 1.16
UBE2F-218ENST00000454786 SHTN1A0MZ66 631 aa22.31■■□□□ 1.16
UBE2F-218ENST00000454786 C6orf229H3BNL8 230 aa22.31■■□□□ 1.16
UBE2F-218ENST00000454786 PSMD14O00487 310 aa22.31■■□□□ 1.16
UBE2F-218ENST00000454786 IRS4O14654 1257 aaPredicted RBP22.31■■□□□ 1.16
UBE2F-218ENST00000454786 GOLGA2Q08379 1002 aa22.31■■□□□ 1.16
UBE2F-218ENST00000454786 DPF2Q92785 391 aa22.31■■□□□ 1.16
UBE2F-218ENST00000454786 EYA3Q99504 573 aa22.31■■□□□ 1.16
UBE2F-218ENST00000454786 ZBTB12Q9Y330 459 aaPredicted RBP22.31■■□□□ 1.16
UBE2F-218ENST00000454786 ZNF646O15015 1829 aaPredicted RBP22.3■■□□□ 1.16
UBE2F-218ENST00000454786 GPSM2P81274 684 aa22.3■■□□□ 1.16
UBE2F-218ENST00000454786 TRIM28Q13263 835 aaKnown RBP22.3■■□□□ 1.16
UBE2F-218ENST00000454786 CACNA1FO60840 1977 aa22.3■■□□□ 1.16
UBE2F-218ENST00000454786 RIMBP2O15034 1052 aa22.29■■□□□ 1.16
UBE2F-218ENST00000454786 ECE2O60344 883 aa22.29■■□□□ 1.16
UBE2F-218ENST00000454786 RIC3Q7Z5B4 369 aa22.29■■□□□ 1.16
UBE2F-218ENST00000454786 POLLQ9UGP5 575 aa22.29■■□□□ 1.16
UBE2F-218ENST00000454786 CA12O43570 354 aa22.28■■□□□ 1.16
UBE2F-218ENST00000454786 RPS12P25398 132 aaKnown RBP22.28■■□□□ 1.16
UBE2F-218ENST00000454786 BRPF1P55201 1214 aaPredicted RBP22.28■■□□□ 1.16
UBE2F-218ENST00000454786 ZBTB38Q8NAP3 1195 aaPredicted RBP22.28■■□□□ 1.16
UBE2F-218ENST00000454786 RTL9Q8NET4 1388 aa22.27■■□□□ 1.16
UBE2F-218ENST00000454786 ZNF853P0CG23 659 aa22.27■■□□□ 1.16
UBE2F-218ENST00000454786 HSP90B1P14625 803 aaKnown RBP22.27■■□□□ 1.16
UBE2F-218ENST00000454786 RPS8P62241 208 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms