RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CRAMP1Q96RY5 1269 aa7.9□□□□□ -1.14
HLA-DPA3-207ENST00000454398 UTP14AQ9BVJ6 771 aaKnown RBP7.9□□□□□ -1.14
HLA-DPA3-207ENST00000454398 CHPF2Q9P2E5 772 aa7.9□□□□□ -1.14
HLA-DPA3-207ENST00000454398 ZBTB12Q9Y330 459 aaPredicted RBP7.9□□□□□ -1.14
HLA-DPA3-207ENST00000454398 ATP6V0A2Q9Y487 856 aa7.9□□□□□ -1.14
HLA-DPA3-207ENST00000454398 ASTN2O75129 1339 aaPredicted RBP7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 CCDC85CA6NKD9 419 aa7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 ADM5C9JUS6 153 aa7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 TNRC18O15417 2968 aaPredicted RBP7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 NEUROD2Q15784 382 aa7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 COPS6Q7L5N1 327 aa7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 NLRP10Q86W26 655 aa7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 MICALL2Q8IY33 904 aa7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 PNISRQ8TF01 805 aaKnown RBP7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 DBNDD1Q9H9R9 158 aa7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 KCNQ5Q9NR82 932 aa7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 LAS1LQ9Y4W2 734 aaKnown RBP7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 TLL2Q9Y6L7 1015 aa7.89□□□□□ -1.15
HLA-DPA3-207ENST00000454398 RTL9Q8NET4 1388 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 ERBB4Q15303 1308 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 ATP5J2-PTCD1G3V325 749 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 RIPK4P57078 832 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 MAP2K1Q02750 393 aaPredicted RBP7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 TBC1D10BQ4KMP7 808 aaPredicted RBP7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 PARP10Q53GL7 1025 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 CC2D2BQ6DHV5 1058 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 CIAPIN1Q6FI81 312 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 USP50Q70EL3 339 aaPredicted RBP7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 SAMD7Q7Z3H4 446 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 PPP1R42Q7Z4L9 355 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 SAPCD2Q86UD0 394 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 CELF1Q92879 486 aaKnown RBP7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 NLRP3Q96P20 1036 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 BCL2L13Q9BXK5 485 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 RTFDC1Q9BY42 306 aaPredicted RBP7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 ADARB2Q9NS39 739 aaKnown RBP7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 TRMT112Q9UI30 125 aaKnown RBP7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 ZNRF3Q9ULT6 936 aa7.88□□□□□ -1.15
HLA-DPA3-207ENST00000454398 SH3TC1Q8TE82 1336 aa7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 PSMD14O00487 310 aa7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 RIMBP2O15034 1052 aa7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 TMPOP42166 694 aaKnown RBP7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 KIAA2012Q0VF49 1180 aa7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 GRAPQ13588 217 aa7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 SLC10A5Q5PT55 438 aa7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 MPNDQ8N594 471 aa7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 GRAPLQ8TC17 118 aaPredicted RBP7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 CCDC85AQ96PX6 553 aaPredicted RBP7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 BEGAINQ9BUH8 593 aa7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 SCAF8Q9UPN6 1271 aaKnown RBP7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 POLR2AP24928 1970 aaKnown RBP7.87□□□□□ -1.15
HLA-DPA3-207ENST00000454398 WTIPA6NIX2 430 aaPredicted RBP7.86□□□□□ -1.15
HLA-DPA3-207ENST00000454398 ECE1P42892 770 aa7.86□□□□□ -1.15
HLA-DPA3-207ENST00000454398 GPSM2P81274 684 aa7.86□□□□□ -1.15
HLA-DPA3-207ENST00000454398 DOK7Q18PE1 504 aa7.86□□□□□ -1.15
HLA-DPA3-207ENST00000454398 HDGFL1Q5TGJ6 251 aa7.86□□□□□ -1.15
HLA-DPA3-207ENST00000454398 DDX46Q7L014 1031 aaKnown RBP7.86□□□□□ -1.15
HLA-DPA3-207ENST00000454398 USP48Q86UV5 1035 aa7.86□□□□□ -1.15
HLA-DPA3-207ENST00000454398 JARID2Q92833 1246 aaPredicted RBP7.86□□□□□ -1.15
HLA-DPA3-207ENST00000454398 FAM89AQ96GI7 184 aa7.86□□□□□ -1.15
HLA-DPA3-207ENST00000454398 MCOLN1Q9GZU1 580 aa7.86□□□□□ -1.15
HLA-DPA3-207ENST00000454398 HTTP42858 3142 aa7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 ZNF646O15015 1829 aaPredicted RBP7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 ECE2O60344 883 aa7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 HUNKP57058 714 aa7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 RBM26Q5T8P6 1007 aaKnown RBP7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 TMX4Q9H1E5 349 aaPredicted RBP7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 GGA3Q9NZ52 723 aa7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 POLLQ9UGP5 575 aa7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 PGAP2Q9UHJ9 254 aa7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 CNOT7Q9UIV1 285 aaKnown RBP7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 TRIM35Q9UPQ4 493 aa7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 PSME4Q14997 1843 aa7.85□□□□□ -1.15
HLA-DPA3-207ENST00000454398 MKI67P46013 3256 aaKnown RBP7.84□□□□□ -1.15
HLA-DPA3-207ENST00000454398 CDHR2Q9BYE9 1310 aa7.84□□□□□ -1.15
HLA-DPA3-207ENST00000454398 FAM155AB1AL88 458 aaPredicted RBP7.84□□□□□ -1.15
HLA-DPA3-207ENST00000454398 C6orf229H3BNL8 230 aa7.84□□□□□ -1.15
HLA-DPA3-207ENST00000454398 SOX10P56693 466 aa7.84□□□□□ -1.15
HLA-DPA3-207ENST00000454398 TCIRG1Q13488 830 aa7.84□□□□□ -1.15
HLA-DPA3-207ENST00000454398 KRT26Q7Z3Y9 468 aa7.84□□□□□ -1.15
HLA-DPA3-207ENST00000454398 SP8Q8IXZ3 490 aa7.84□□□□□ -1.15
HLA-DPA3-207ENST00000454398 SUPT20HQ8NEM7 779 aa7.84□□□□□ -1.15
HLA-DPA3-207ENST00000454398 SEC31BQ9NQW1 1179 aa7.84□□□□□ -1.15
HLA-DPA3-207ENST00000454398 NSFL1CQ9UNZ2 370 aaKnown RBP7.84□□□□□ -1.15
HLA-DPA3-207ENST00000454398 UFL1O94874 794 aa7.83□□□□□ -1.16
HLA-DPA3-207ENST00000454398 BRPF1P55201 1214 aaPredicted RBP7.83□□□□□ -1.16
HLA-DPA3-207ENST00000454398 DGKZQ13574 1117 aa7.83□□□□□ -1.16
HLA-DPA3-207ENST00000454398 KIF4BQ2VIQ3 1234 aa7.83□□□□□ -1.16
HLA-DPA3-207ENST00000454398 GRIPAP1Q4V328 841 aa7.83□□□□□ -1.16
HLA-DPA3-207ENST00000454398 HSP90AB3PQ58FF7 597 aa7.83□□□□□ -1.16
HLA-DPA3-207ENST00000454398 ISCA1Q9BUE6 129 aa7.83□□□□□ -1.16
HLA-DPA3-207ENST00000454398 BRCA2P51587 3418 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 CENPFP49454 3210 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 ELL2O00472 640 aaPredicted RBP7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 CHL1O00533 1208 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 IRS4O14654 1257 aaPredicted RBP7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 BBOX1O75936 387 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 RGS19P49795 217 aa7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 MLLT1Q03111 559 aaPredicted RBP7.82□□□□□ -1.16
HLA-DPA3-207ENST00000454398 LMOD3Q0VAK6 560 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms