RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
DDX39A-203ENST00000454233 PCCAP05165 728 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-203ENST00000454233 NEXNQ0ZGT2 675 aa13.7□□□□□ -0.22
DDX39A-203ENST00000454233 DPP8Q6V1X1 898 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-203ENST00000454233 NIM1KQ8IY84 436 aa13.7□□□□□ -0.22
DDX39A-203ENST00000454233 MPNDQ8N594 471 aa13.7□□□□□ -0.22
DDX39A-203ENST00000454233 PI4KAP1Q8N8J0 262 aa13.7□□□□□ -0.22
DDX39A-203ENST00000454233 L3MBTL3Q96JM7 780 aaPredicted RBP13.7□□□□□ -0.22
DDX39A-203ENST00000454233 VPS33BQ9H267 617 aa13.7□□□□□ -0.22
DDX39A-203ENST00000454233 MYH16Q9H6N6 1097 aa13.7□□□□□ -0.22
DDX39A-203ENST00000454233 SLC51AQ86UW1 340 aa13.69□□□□□ -0.22
DDX39A-203ENST00000454233 GPC2Q8N158 579 aa13.69□□□□□ -0.22
DDX39A-203ENST00000454233 DDX60Q8IY21 1712 aaKnown RBP13.69□□□□□ -0.22
DDX39A-203ENST00000454233 EXOSC9Q06265 439 aaKnown RBP13.68□□□□□ -0.22
DDX39A-203ENST00000454233 AOC3Q16853 763 aa13.68□□□□□ -0.22
DDX39A-203ENST00000454233 RTFDC1Q9BY42 306 aaPredicted RBP13.68□□□□□ -0.22
DDX39A-203ENST00000454233 HACL1Q9UJ83 578 aa13.68□□□□□ -0.22
DDX39A-203ENST00000454233 PDE8AO60658 829 aa13.67□□□□□ -0.22
DDX39A-203ENST00000454233 VAMP4O75379 141 aa13.67□□□□□ -0.22
DDX39A-203ENST00000454233 FLIIQ13045 1269 aa13.67□□□□□ -0.22
DDX39A-203ENST00000454233 CCDC152Q4G0S7 254 aa13.67□□□□□ -0.22
DDX39A-203ENST00000454233 CHADLQ6NUI6 762 aa13.67□□□□□ -0.22
DDX39A-203ENST00000454233 G2E3Q7L622 706 aa13.67□□□□□ -0.22
DDX39A-203ENST00000454233 CELF1Q92879 486 aaKnown RBP13.67□□□□□ -0.22
DDX39A-203ENST00000454233 TAF1DQ9H5J8 278 aaPredicted RBP13.67□□□□□ -0.22
DDX39A-203ENST00000454233 GJA3Q9Y6H8 435 aa13.67□□□□□ -0.22
DDX39A-203ENST00000454233 SCN4AP35499 1836 aa13.67□□□□□ -0.22
DDX39A-203ENST00000454233 RPS8P62241 208 aaKnown RBP13.66□□□□□ -0.22
DDX39A-203ENST00000454233 FKBP5Q13451 457 aaPredicted RBP13.66□□□□□ -0.22
DDX39A-203ENST00000454233 CDHR2Q9BYE9 1310 aa13.65□□□□□ -0.22
DDX39A-203ENST00000454233 TAF1P21675 1872 aa13.65□□□□□ -0.22
DDX39A-203ENST00000454233 IGKV5-2P06315 115 aa13.65□□□□□ -0.22
DDX39A-203ENST00000454233 LMOD1P29536 600 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-203ENST00000454233 EPHX2P34913 555 aa13.65□□□□□ -0.22
DDX39A-203ENST00000454233 KIAA2012Q0VF49 1180 aa13.65□□□□□ -0.22
DDX39A-203ENST00000454233 EAPPQ56P03 285 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-203ENST00000454233 PNMA8AQ86V59 439 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-203ENST00000454233 LDHDQ86WU2 507 aa13.65□□□□□ -0.22
DDX39A-203ENST00000454233 JARID2Q92833 1246 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-203ENST00000454233 SPINK5Q9NQ38 1064 aaPredicted RBP13.65□□□□□ -0.22
DDX39A-203ENST00000454233 ZNRF3Q9ULT6 936 aa13.65□□□□□ -0.22
DDX39A-203ENST00000454233 NSFL1CQ9UNZ2 370 aaKnown RBP13.65□□□□□ -0.22
DDX39A-203ENST00000454233 COL4A5P29400 1685 aa13.65□□□□□ -0.22
DDX39A-203ENST00000454233 CACNA1FO60840 1977 aa13.64□□□□□ -0.23
DDX39A-203ENST00000454233 NEURL1BA8MQ27 555 aa13.64□□□□□ -0.23
DDX39A-203ENST00000454233 POTEIP0CG38 1075 aa13.64□□□□□ -0.23
DDX39A-203ENST00000454233 POTEJP0CG39 1038 aa13.64□□□□□ -0.23
DDX39A-203ENST00000454233 CWF19L2Q2TBE0 894 aaKnown RBP13.64□□□□□ -0.23
DDX39A-203ENST00000454233 DNAAF4Q8WXU2 420 aa13.64□□□□□ -0.23
DDX39A-203ENST00000454233 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
DDX39A-203ENST00000454233 C6orf229H3BNL8 230 aa13.63□□□□□ -0.23
DDX39A-203ENST00000454233 HTRA3P83110 453 aa13.63□□□□□ -0.23
DDX39A-203ENST00000454233 WASHC4Q2M389 1173 aa13.63□□□□□ -0.23
DDX39A-203ENST00000454233 CCDC85AQ96PX6 553 aaPredicted RBP13.63□□□□□ -0.23
DDX39A-203ENST00000454233 EYA3Q99504 573 aa13.63□□□□□ -0.23
DDX39A-203ENST00000454233 SEC31BQ9NQW1 1179 aa13.63□□□□□ -0.23
DDX39A-203ENST00000454233 LRRC37AA6NMS7 1700 aa13.63□□□□□ -0.23
DDX39A-203ENST00000454233 CTSWP56202 376 aa13.62□□□□□ -0.23
DDX39A-203ENST00000454233 GPSM2P81274 684 aa13.62□□□□□ -0.23
DDX39A-203ENST00000454233 CXCL9Q07325 125 aa13.62□□□□□ -0.23
DDX39A-203ENST00000454233 TNIP1Q15025 636 aa13.62□□□□□ -0.23
DDX39A-203ENST00000454233 CIAPIN1Q6FI81 312 aa13.62□□□□□ -0.23
DDX39A-203ENST00000454233 UBE3BQ7Z3V4 1068 aa13.62□□□□□ -0.23
DDX39A-203ENST00000454233 ANKRD18AQ8IVF6 992 aa13.62□□□□□ -0.23
DDX39A-203ENST00000454233 DNAJC5GQ8N7S2 189 aa13.62□□□□□ -0.23
DDX39A-203ENST00000454233 LINS1Q8NG48 757 aa13.62□□□□□ -0.23
DDX39A-203ENST00000454233 CDC5LQ99459 802 aaKnown RBP13.62□□□□□ -0.23
DDX39A-203ENST00000454233 ZNF521Q96K83 1311 aa13.62□□□□□ -0.23
DDX39A-203ENST00000454233 H7C1W4 665 aa13.61□□□□□ -0.23
DDX39A-203ENST00000454233 GCKRQ14397 625 aa13.61□□□□□ -0.23
DDX39A-203ENST00000454233 KLRG1Q96E93 195 aa13.61□□□□□ -0.23
DDX39A-203ENST00000454233 ANKIB1Q9P2G1 1089 aa13.61□□□□□ -0.23
DDX39A-203ENST00000454233 CCER2I3L3R5 266 aa13.6□□□□□ -0.23
DDX39A-203ENST00000454233 RIMBP2O15034 1052 aa13.6□□□□□ -0.23
DDX39A-203ENST00000454233 EPS15P42566 896 aa13.6□□□□□ -0.23
DDX39A-203ENST00000454233 SCNN1DP51172 638 aa13.6□□□□□ -0.23
DDX39A-203ENST00000454233 TTLL11Q8NHH1 800 aa13.6□□□□□ -0.23
DDX39A-203ENST00000454233 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
DDX39A-203ENST00000454233 DUOX1Q9NRD9 1551 aa13.6□□□□□ -0.23
DDX39A-203ENST00000454233 PODXL2Q9NZ53 605 aa13.6□□□□□ -0.23
DDX39A-203ENST00000454233 POLLQ9UGP5 575 aa13.6□□□□□ -0.23
DDX39A-203ENST00000454233 CEP350Q5VT06 3117 aa13.59□□□□□ -0.23
DDX39A-203ENST00000454233 E9PSI1 815 aa13.59□□□□□ -0.23
DDX39A-203ENST00000454233 G3V3G9 751 aa13.59□□□□□ -0.23
DDX39A-203ENST00000454233 RAD17O75943 681 aa13.59□□□□□ -0.23
DDX39A-203ENST00000454233 UFL1O94874 794 aa13.59□□□□□ -0.23
DDX39A-203ENST00000454233 DCAF8Q5TAQ9 597 aa13.59□□□□□ -0.23
DDX39A-203ENST00000454233 USP50Q70EL3 339 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-203ENST00000454233 TBC1D16Q8TBP0 767 aa13.59□□□□□ -0.23
DDX39A-203ENST00000454233 ZC3H12CQ9C0D7 883 aaKnown RBP13.59□□□□□ -0.23
DDX39A-203ENST00000454233 GPRC5DQ9NZD1 345 aa13.59□□□□□ -0.23
DDX39A-203ENST00000454233 GGA1Q9UJY5 639 aa13.59□□□□□ -0.23
DDX39A-203ENST00000454233 COL4A1P02462 1669 aa13.59□□□□□ -0.23
DDX39A-203ENST00000454233 RTL9Q8NET4 1388 aa13.58□□□□□ -0.23
DDX39A-203ENST00000454233 F6X3S4 739 aa13.58□□□□□ -0.24
DDX39A-203ENST00000454233 GMPSP49915 693 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-203ENST00000454233 MAP1SQ66K74 1059 aaPredicted RBP13.58□□□□□ -0.24
DDX39A-203ENST00000454233 PLA2G12BQ9BX93 195 aa13.58□□□□□ -0.24
DDX39A-203ENST00000454233 GREM2Q9H772 168 aa13.58□□□□□ -0.24
DDX39A-203ENST00000454233 DBNDD1Q9H9R9 158 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 1750.3 ms