RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 CFAP45Q9UL16 551 aa20.23■□□□□ 0.83
TCF3-204ENST00000453954 SERPINC1P01008 464 aa20.23■□□□□ 0.83
TCF3-204ENST00000453954 HSP90AB3PQ58FF7 597 aa20.23■□□□□ 0.83
TCF3-204ENST00000453954 NEK1Q96PY6 1258 aa20.23■□□□□ 0.83
TCF3-204ENST00000453954 MAP2P11137 1827 aaKnown RBP20.22■□□□□ 0.83
TCF3-204ENST00000453954 TEX35Q5T0J7 233 aa20.22■□□□□ 0.83
TCF3-204ENST00000453954 KNDC1Q76NI1 1749 aa20.22■□□□□ 0.83
TCF3-204ENST00000453954 SLU7O95391 586 aaKnown RBP20.22■□□□□ 0.83
TCF3-204ENST00000453954 SALL3Q9BXA9 1300 aa20.22■□□□□ 0.83
TCF3-204ENST00000453954 STX1AQ16623 288 aa20.21■□□□□ 0.83
TCF3-204ENST00000453954 ANKRD1Q15327 319 aa20.21■□□□□ 0.83
TCF3-204ENST00000453954 NEK11Q8NG66 645 aa20.21■□□□□ 0.83
TCF3-204ENST00000453954 ATP5J2-PTCD1G3V325 749 aa20.21■□□□□ 0.83
TCF3-204ENST00000453954 PTCD1O75127 700 aaKnown RBP20.21■□□□□ 0.83
TCF3-204ENST00000453954 BICC1Q9H694 974 aaKnown RBP20.21■□□□□ 0.83
TCF3-204ENST00000453954 SETBP1Q9Y6X0 1596 aa20.2■□□□□ 0.82
TCF3-204ENST00000453954 MARCKSP29966 332 aaPredicted RBP20.2■□□□□ 0.82
TCF3-204ENST00000453954 SLC39A6Q13433 755 aa20.2■□□□□ 0.82
TCF3-204ENST00000453954 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.2■□□□□ 0.82
TCF3-204ENST00000453954 RPS6KB1P23443 525 aa20.2■□□□□ 0.82
TCF3-204ENST00000453954 CFAP100Q494V2 611 aa20.2■□□□□ 0.82
TCF3-204ENST00000453954 CPLX1O14810 134 aa20.2■□□□□ 0.82
TCF3-204ENST00000453954 FAM69CQ0P6D2 419 aa20.2■□□□□ 0.82
TCF3-204ENST00000453954 C1orf141Q5JVX7 400 aa20.2■□□□□ 0.82
TCF3-204ENST00000453954 USP28Q96RU2 1077 aa20.2■□□□□ 0.82
TCF3-204ENST00000453954 GJB4Q9NTQ9 266 aa20.2■□□□□ 0.82
TCF3-204ENST00000453954 SEC31AO94979 1220 aaKnown RBP20.19■□□□□ 0.82
TCF3-204ENST00000453954 CERS3Q8IU89 383 aa20.19■□□□□ 0.82
TCF3-204ENST00000453954 LRRN4CLQ8ND94 238 aa20.19■□□□□ 0.82
TCF3-204ENST00000453954 SNRKQ9NRH2 765 aa20.19■□□□□ 0.82
TCF3-204ENST00000453954 PTPRMP28827 1452 aa20.19■□□□□ 0.82
TCF3-204ENST00000453954 TPM4P67936 248 aa20.19■□□□□ 0.82
TCF3-204ENST00000453954 DDX41Q9UJV9 622 aaKnown RBP20.19■□□□□ 0.82
TCF3-204ENST00000453954 YEATS2Q9ULM3 1422 aa20.19■□□□□ 0.82
TCF3-204ENST00000453954 TIGD1Q96MW7 591 aa20.19■□□□□ 0.82
TCF3-204ENST00000453954 ANO10Q9NW15 660 aa20.19■□□□□ 0.82
TCF3-204ENST00000453954 CEBPAP49715 358 aaPredicted RBP20.18■□□□□ 0.82
TCF3-204ENST00000453954 GYS2P54840 703 aa20.18■□□□□ 0.82
TCF3-204ENST00000453954 WASHC4Q2M389 1173 aa20.18■□□□□ 0.82
TCF3-204ENST00000453954 NAT10Q9H0A0 1025 aaKnown RBP20.18■□□□□ 0.82
TCF3-204ENST00000453954 ZC3H13Q5T200 1668 aaKnown RBP20.18■□□□□ 0.82
TCF3-204ENST00000453954 ZCCHC17Q9NP64 241 aaKnown RBP20.18■□□□□ 0.82
TCF3-204ENST00000453954 SETD1BQ9UPS6 1966 aaKnown RBP20.17■□□□□ 0.82
TCF3-204ENST00000453954 MYO3AQ8NEV4 1616 aa20.17■□□□□ 0.82
TCF3-204ENST00000453954 TMCO3Q6UWJ1 677 aa20.17■□□□□ 0.82
TCF3-204ENST00000453954 SYNE3Q6ZMZ3 975 aa20.17■□□□□ 0.82
TCF3-204ENST00000453954 SUCLG2Q96I99 432 aa20.17■□□□□ 0.82
TCF3-204ENST00000453954 INO80Q9ULG1 1556 aaPredicted RBP20.17■□□□□ 0.82
TCF3-204ENST00000453954 GOLIM4O00461 696 aa20.17■□□□□ 0.82
TCF3-204ENST00000453954 HDGFP51858 240 aaKnown RBP20.17■□□□□ 0.82
TCF3-204ENST00000453954 TRIM34Q9BYJ4 488 aa20.17■□□□□ 0.82
TCF3-204ENST00000453954 ABCA9Q8IUA7 1624 aa20.17■□□□□ 0.82
TCF3-204ENST00000453954 CPS1P31327 1500 aa20.17■□□□□ 0.82
TCF3-204ENST00000453954 NECTIN1Q15223 517 aa20.16■□□□□ 0.82
TCF3-204ENST00000453954 MYD88Q99836 296 aa20.16■□□□□ 0.82
TCF3-204ENST00000453954 XPO4Q9C0E2 1151 aaKnown RBP20.16■□□□□ 0.82
TCF3-204ENST00000453954 PTPDC1A2A3K4 754 aa20.16■□□□□ 0.82
TCF3-204ENST00000453954 CTIFO43310 598 aaKnown RBP20.16■□□□□ 0.82
TCF3-204ENST00000453954 NEXNQ0ZGT2 675 aa20.16■□□□□ 0.82
TCF3-204ENST00000453954 SSH2Q76I76 1423 aa20.16■□□□□ 0.82
TCF3-204ENST00000453954 TERF2Q15554 542 aa20.16■□□□□ 0.82
TCF3-204ENST00000453954 RXRAP19793 462 aa20.15■□□□□ 0.82
TCF3-204ENST00000453954 FKBP4Q02790 459 aaKnown RBP eCLIP20.15■□□□□ 0.82
TCF3-204ENST00000453954 BEND3Q5T5X7 828 aa20.15■□□□□ 0.82
TCF3-204ENST00000453954 ERC1Q8IUD2 1116 aa20.15■□□□□ 0.82
TCF3-204ENST00000453954 TDRD7Q8NHU6 1098 aaKnown RBP20.15■□□□□ 0.82
TCF3-204ENST00000453954 CARD6Q9BX69 1037 aa20.15■□□□□ 0.82
TCF3-204ENST00000453954 GPHNQ9NQX3 736 aaPredicted RBP20.15■□□□□ 0.82
TCF3-204ENST00000453954 TOB2Q14106 344 aaPredicted RBP20.15■□□□□ 0.82
TCF3-204ENST00000453954 CCDC82Q8N4S0 544 aa20.15■□□□□ 0.82
TCF3-204ENST00000453954 CPLX3Q8WVH0 158 aa20.15■□□□□ 0.82
TCF3-204ENST00000453954 UTP14AQ9BVJ6 771 aaKnown RBP20.15■□□□□ 0.82
TCF3-204ENST00000453954 GOLPH3LQ9H4A5 285 aa20.15■□□□□ 0.82
TCF3-204ENST00000453954 PLA2G4DQ86XP0 818 aa20.14■□□□□ 0.81
TCF3-204ENST00000453954 ARGLU1Q9NWB6 273 aaPredicted RBP20.14■□□□□ 0.81
TCF3-204ENST00000453954 KIDINS220Q9ULH0 1771 aa20.14■□□□□ 0.81
TCF3-204ENST00000453954 TOMM22Q9NS69 142 aa20.14■□□□□ 0.81
TCF3-204ENST00000453954 RNF216Q9NWF9 866 aaPredicted RBP20.14■□□□□ 0.81
TCF3-204ENST00000453954 SLFN14P0C7P3 912 aa20.13■□□□□ 0.81
TCF3-204ENST00000453954 DPCR1Q3MIW9 517 aa20.13■□□□□ 0.81
TCF3-204ENST00000453954 MROH1Q8NDA8 1641 aa20.13■□□□□ 0.81
TCF3-204ENST00000453954 APPP05067 770 aa20.13■□□□□ 0.81
TCF3-204ENST00000453954 UBE3BQ7Z3V4 1068 aa20.13■□□□□ 0.81
TCF3-204ENST00000453954 ERO1AQ96HE7 468 aa20.13■□□□□ 0.81
TCF3-204ENST00000453954 ZNF396Q96N95 335 aaPredicted RBP20.13■□□□□ 0.81
TCF3-204ENST00000453954 VWDEQ8N2E2 1590 aa20.13■□□□□ 0.81
TCF3-204ENST00000453954 CDK12Q9NYV4 1490 aaPredicted RBP20.12■□□□□ 0.81
TCF3-204ENST00000453954 TTC41PQ6P2S7 1318 aa20.12■□□□□ 0.81
TCF3-204ENST00000453954 HIP1O00291 1037 aa20.12■□□□□ 0.81
TCF3-204ENST00000453954 SCRN1Q12765 414 aa20.12■□□□□ 0.81
TCF3-204ENST00000453954 BMS1Q14692 1282 aaKnown RBP20.12■□□□□ 0.81
TCF3-204ENST00000453954 MAP4K1Q92918 833 aa20.12■□□□□ 0.81
TCF3-204ENST00000453954 CRB1P82279 1406 aa20.12■□□□□ 0.81
TCF3-204ENST00000453954 CPSF1Q10570 1443 aaKnown RBP20.12■□□□□ 0.81
TCF3-204ENST00000453954 SLC3A2P08195 630 aaKnown RBP20.12■□□□□ 0.81
TCF3-204ENST00000453954 KARSQ15046 597 aaKnown RBP20.12■□□□□ 0.81
TCF3-204ENST00000453954 GTF2E1P29083 439 aaPredicted RBP20.11■□□□□ 0.81
TCF3-204ENST00000453954 GABPB1Q06547 395 aaPredicted RBP20.11■□□□□ 0.81
TCF3-204ENST00000453954 A0A0G2JLW4 131 aa20.11■□□□□ 0.81
TCF3-204ENST00000453954 SASH1O94885 1247 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms