RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 UBTFL1P0CB47 393 aaPredicted RBP18.37■□□□□ 0.53
NCKIPSD-207ENST00000453349 TTLL11Q8NHH1 800 aa18.37■□□□□ 0.53
NCKIPSD-207ENST00000453349 GRIN3BO60391 1043 aa18.36■□□□□ 0.53
NCKIPSD-207ENST00000453349 BBOX1O75936 387 aa18.36■□□□□ 0.53
NCKIPSD-207ENST00000453349 PRPF40BQ6NWY9 871 aaKnown RBP18.36■□□□□ 0.53
NCKIPSD-207ENST00000453349 ITPRIPQ8IWB1 547 aa18.36■□□□□ 0.53
NCKIPSD-207ENST00000453349 SUCLG2Q96I99 432 aa18.36■□□□□ 0.53
NCKIPSD-207ENST00000453349 CCDC85AQ96PX6 553 aaPredicted RBP18.36■□□□□ 0.53
NCKIPSD-207ENST00000453349 TMX4Q9H1E5 349 aaPredicted RBP18.36■□□□□ 0.53
NCKIPSD-207ENST00000453349 DLEC1Q9Y238 1755 aa18.36■□□□□ 0.53
NCKIPSD-207ENST00000453349 LAMB2P55268 1798 aa18.35■□□□□ 0.53
NCKIPSD-207ENST00000453349 COL11A2P13942 1736 aaPredicted RBP18.35■□□□□ 0.53
NCKIPSD-207ENST00000453349 CSF1RP07333 972 aa18.35■□□□□ 0.53
NCKIPSD-207ENST00000453349 YBX3P16989 372 aaKnown RBP eCLIP18.35■□□□□ 0.53
NCKIPSD-207ENST00000453349 FOXO4P98177 505 aa18.35■□□□□ 0.53
NCKIPSD-207ENST00000453349 GRAPQ13588 217 aa18.35■□□□□ 0.53
NCKIPSD-207ENST00000453349 PDE3AQ14432 1141 aa18.35■□□□□ 0.53
NCKIPSD-207ENST00000453349 GRAPLQ8TC17 118 aaPredicted RBP18.35■□□□□ 0.53
NCKIPSD-207ENST00000453349 PANK1Q8TE04 598 aa18.35■□□□□ 0.53
NCKIPSD-207ENST00000453349 C21orf2O43822 256 aa18.34■□□□□ 0.53
NCKIPSD-207ENST00000453349 RLBP1P12271 317 aa18.34■□□□□ 0.53
NCKIPSD-207ENST00000453349 LMBR1LQ6UX01 489 aa18.34■□□□□ 0.53
NCKIPSD-207ENST00000453349 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
NCKIPSD-207ENST00000453349 CHMP3Q9Y3E7 222 aa18.34■□□□□ 0.53
NCKIPSD-207ENST00000453349 PPEF1O14829 653 aaPredicted RBP18.33■□□□□ 0.52
NCKIPSD-207ENST00000453349 RPS8P62241 208 aaKnown RBP18.33■□□□□ 0.52
NCKIPSD-207ENST00000453349 SOGA3Q5TF21 947 aa18.33■□□□□ 0.52
NCKIPSD-207ENST00000453349 ARHGAP27Q6ZUM4 889 aa18.33■□□□□ 0.52
NCKIPSD-207ENST00000453349 CDC5LQ99459 802 aaKnown RBP18.33■□□□□ 0.52
NCKIPSD-207ENST00000453349 MEIS3Q99687 375 aa18.33■□□□□ 0.52
NCKIPSD-207ENST00000453349 BRCA1P38398 1863 aaKnown RBP18.33■□□□□ 0.52
NCKIPSD-207ENST00000453349 ANKRD18BA2A2Z9 1011 aa18.32■□□□□ 0.52
NCKIPSD-207ENST00000453349 EPHA10Q5JZY3 1008 aa18.32■□□□□ 0.52
NCKIPSD-207ENST00000453349 TMC4Q7Z404 712 aa18.32■□□□□ 0.52
NCKIPSD-207ENST00000453349 ANKRD18AQ8IVF6 992 aa18.32■□□□□ 0.52
NCKIPSD-207ENST00000453349 CHMP4BQ9H444 224 aaKnown RBP18.32■□□□□ 0.52
NCKIPSD-207ENST00000453349 BICC1Q9H694 974 aaKnown RBP18.32■□□□□ 0.52
NCKIPSD-207ENST00000453349 GREM2Q9H772 168 aa18.32■□□□□ 0.52
NCKIPSD-207ENST00000453349 SEC31BQ9NQW1 1179 aa18.32■□□□□ 0.52
NCKIPSD-207ENST00000453349 ZBTB7BO15156 539 aaPredicted RBP18.31■□□□□ 0.52
NCKIPSD-207ENST00000453349 ITGA6P23229 1130 aa18.31■□□□□ 0.52
NCKIPSD-207ENST00000453349 RRP1P56182 461 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-207ENST00000453349 IFIT5Q13325 482 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-207ENST00000453349 MVPQ14764 893 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-207ENST00000453349 CCDC57Q2TAC2 916 aa18.31■□□□□ 0.52
NCKIPSD-207ENST00000453349 CC2D2BQ6DHV5 1058 aa18.31■□□□□ 0.52
NCKIPSD-207ENST00000453349 CELF1Q92879 486 aaKnown RBP18.31■□□□□ 0.52
NCKIPSD-207ENST00000453349 KAZALD1Q96I82 304 aa18.31■□□□□ 0.52
NCKIPSD-207ENST00000453349 RTL9Q8NET4 1388 aa18.3■□□□□ 0.52
NCKIPSD-207ENST00000453349 GNAI2P04899 355 aa18.3■□□□□ 0.52
NCKIPSD-207ENST00000453349 IGHMBP2P38935 993 aaKnown RBP18.3■□□□□ 0.52
NCKIPSD-207ENST00000453349 GRIPAP1Q4V328 841 aa18.3■□□□□ 0.52
NCKIPSD-207ENST00000453349 SP8Q8IXZ3 490 aa18.3■□□□□ 0.52
NCKIPSD-207ENST00000453349 C7orf43Q8WVR3 580 aa18.3■□□□□ 0.52
NCKIPSD-207ENST00000453349 DDX19BQ9UMR2 479 aa18.3■□□□□ 0.52
NCKIPSD-207ENST00000453349 COG6Q9Y2V7 657 aa18.3■□□□□ 0.52
NCKIPSD-207ENST00000453349 ATP6V0A2Q9Y487 856 aa18.3■□□□□ 0.52
NCKIPSD-207ENST00000453349 MYH3P11055 1940 aa18.29■□□□□ 0.52
NCKIPSD-207ENST00000453349 SLX4Q8IY92 1834 aa18.29■□□□□ 0.52
NCKIPSD-207ENST00000453349 FAM161AQ3B820 660 aa18.29■□□□□ 0.52
NCKIPSD-207ENST00000453349 RABL6Q3YEC7 729 aaPredicted RBP18.29■□□□□ 0.52
NCKIPSD-207ENST00000453349 CCDC93Q567U6 631 aa18.29■□□□□ 0.52
NCKIPSD-207ENST00000453349 TAF7LQ5H9L4 462 aa18.29■□□□□ 0.52
NCKIPSD-207ENST00000453349 RTKN2Q8IZC4 609 aa18.29■□□□□ 0.52
NCKIPSD-207ENST00000453349 LRRFIP2Q9Y608 721 aaKnown RBP18.29■□□□□ 0.52
NCKIPSD-207ENST00000453349 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
NCKIPSD-207ENST00000453349 C20orf194Q5TEA3 1177 aa18.28■□□□□ 0.52
NCKIPSD-207ENST00000453349 MPHOSPH8Q99549 860 aa18.28■□□□□ 0.52
NCKIPSD-207ENST00000453349 SUPT16HQ9Y5B9 1047 aaKnown RBP18.28■□□□□ 0.52
NCKIPSD-207ENST00000453349 ARFGEF1Q9Y6D6 1849 aa18.28■□□□□ 0.52
NCKIPSD-207ENST00000453349 ANKRD44Q8N8A2 993 aa18.27■□□□□ 0.52
NCKIPSD-207ENST00000453349 BSDC1Q9NW68 430 aaPredicted RBP18.27■□□□□ 0.52
NCKIPSD-207ENST00000453349 OLFM4Q6UX06 510 aa18.25■□□□□ 0.51
NCKIPSD-207ENST00000453349 MPNDQ8N594 471 aa18.25■□□□□ 0.51
NCKIPSD-207ENST00000453349 TAF1P21675 1872 aa18.24■□□□□ 0.51
NCKIPSD-207ENST00000453349 LDHAL6AQ6ZMR3 332 aa18.24■□□□□ 0.51
NCKIPSD-207ENST00000453349 FKBP4Q02790 459 aaKnown RBP eCLIP18.23■□□□□ 0.51
NCKIPSD-207ENST00000453349 DPP8Q6V1X1 898 aaPredicted RBP18.23■□□□□ 0.51
NCKIPSD-207ENST00000453349 SUPT20HQ8NEM7 779 aa18.23■□□□□ 0.51
NCKIPSD-207ENST00000453349 ZNF594Q96JF6 807 aaPredicted RBP18.23■□□□□ 0.51
NCKIPSD-207ENST00000453349 TAOK3Q9H2K8 898 aa18.23■□□□□ 0.51
NCKIPSD-207ENST00000453349 NSFL1CQ9UNZ2 370 aaKnown RBP18.23■□□□□ 0.51
NCKIPSD-207ENST00000453349 PSMD1Q99460 953 aa18.22■□□□□ 0.51
NCKIPSD-207ENST00000453349 CNNM1Q9NRU3 951 aa18.22■□□□□ 0.51
NCKIPSD-207ENST00000453349 ANKIB1Q9P2G1 1089 aa18.22■□□□□ 0.51
NCKIPSD-207ENST00000453349 MINPP1Q9UNW1 487 aa18.22■□□□□ 0.51
NCKIPSD-207ENST00000453349 SRCAPQ6ZRS2 3230 aa18.22■□□□□ 0.51
NCKIPSD-207ENST00000453349 SRGAP3O43295 1099 aa18.21■□□□□ 0.51
NCKIPSD-207ENST00000453349 GPSM2P81274 684 aa18.21■□□□□ 0.51
NCKIPSD-207ENST00000453349 ATP8B2P98198 1209 aa18.21■□□□□ 0.51
NCKIPSD-207ENST00000453349 RASSF7Q02833 373 aa18.21■□□□□ 0.51
NCKIPSD-207ENST00000453349 MTX1Q13505 466 aa18.21■□□□□ 0.51
NCKIPSD-207ENST00000453349 ANKRD2Q9GZV1 360 aa18.21■□□□□ 0.51
NCKIPSD-207ENST00000453349 C1orf115Q9H7X2 142 aa18.21■□□□□ 0.51
NCKIPSD-207ENST00000453349 ZBTB40Q9NUA8 1239 aa18.21■□□□□ 0.51
NCKIPSD-207ENST00000453349 LTBP3Q9NS15 1303 aa18.21■□□□□ 0.51
NCKIPSD-207ENST00000453349 NFKBIEO00221 500 aa18.2■□□□□ 0.5
NCKIPSD-207ENST00000453349 COL4A1P02462 1669 aa18.19■□□□□ 0.5
NCKIPSD-207ENST00000453349 C6orf229H3BNL8 230 aa18.19■□□□□ 0.5
NCKIPSD-207ENST00000453349 CENPBP07199 599 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms