RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 TAF1P21675 1872 aa15.31■□□□□ 0.04
HERC3-207ENST00000452979 GMPSP49915 693 aaPredicted RBP15.31■□□□□ 0.04
HERC3-207ENST00000452979 TNIP1Q15025 636 aa15.31■□□□□ 0.04
HERC3-207ENST00000452979 CIAPIN1Q6FI81 312 aa15.31■□□□□ 0.04
HERC3-207ENST00000452979 SAPCD2Q86UD0 394 aa15.31■□□□□ 0.04
HERC3-207ENST00000452979 HHIPL1Q96JK4 782 aa15.31■□□□□ 0.04
HERC3-207ENST00000452979 LRRC37AA6NMS7 1700 aa15.3■□□□□ 0.04
HERC3-207ENST00000452979 HCLS1P14317 486 aaPredicted RBP15.3■□□□□ 0.04
HERC3-207ENST00000452979 TMPOP42166 694 aaKnown RBP15.3■□□□□ 0.04
HERC3-207ENST00000452979 GRAPQ13588 217 aa15.3■□□□□ 0.04
HERC3-207ENST00000452979 DDX46Q7L014 1031 aaKnown RBP15.3■□□□□ 0.04
HERC3-207ENST00000452979 TMC4Q7Z404 712 aa15.3■□□□□ 0.04
HERC3-207ENST00000452979 GRAPLQ8TC17 118 aaPredicted RBP15.3■□□□□ 0.04
HERC3-207ENST00000452979 SH3TC1Q8TE82 1336 aa15.3■□□□□ 0.04
HERC3-207ENST00000452979 XAGE3Q8WTP9 111 aa15.3■□□□□ 0.04
HERC3-207ENST00000452979 BEGAINQ9BUH8 593 aa15.3■□□□□ 0.04
HERC3-207ENST00000452979 HIRAP54198 1017 aaPredicted RBP15.29■□□□□ 0.04
HERC3-207ENST00000452979 LMOD3Q0VAK6 560 aa15.29■□□□□ 0.04
HERC3-207ENST00000452979 PAXIP1Q6ZW49 1069 aaPredicted RBP15.29■□□□□ 0.04
HERC3-207ENST00000452979 TRMT112Q9UI30 125 aaKnown RBP15.29■□□□□ 0.04
HERC3-207ENST00000452979 DDX60Q8IY21 1712 aaKnown RBP15.29■□□□□ 0.04
HERC3-207ENST00000452979 DUOX1Q9NRD9 1551 aa15.28■□□□□ 0.04
HERC3-207ENST00000452979 CHL1O00533 1208 aa15.28■□□□□ 0.04
HERC3-207ENST00000452979 CELF2O95319 508 aaKnown RBP15.28■□□□□ 0.04
HERC3-207ENST00000452979 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
HERC3-207ENST00000452979 CDC37L1Q7L3B6 337 aa15.28■□□□□ 0.04
HERC3-207ENST00000452979 BCL2L13Q9BXK5 485 aa15.28■□□□□ 0.04
HERC3-207ENST00000452979 GLIS2Q9BZE0 524 aaPredicted RBP15.28■□□□□ 0.04
HERC3-207ENST00000452979 CNOT7Q9UIV1 285 aaKnown RBP15.28■□□□□ 0.04
HERC3-207ENST00000452979 YDJCA8MPS7 323 aa15.27■□□□□ 0.04
HERC3-207ENST00000452979 CA12O43570 354 aa15.27■□□□□ 0.04
HERC3-207ENST00000452979 AOC2O75106 756 aa15.27■□□□□ 0.04
HERC3-207ENST00000452979 RAD17O75943 681 aa15.27■□□□□ 0.04
HERC3-207ENST00000452979 GRM1Q13255 1194 aa15.27■□□□□ 0.04
HERC3-207ENST00000452979 RALBP1Q15311 655 aa15.27■□□□□ 0.04
HERC3-207ENST00000452979 RGS19P49795 217 aa15.26■□□□□ 0.03
HERC3-207ENST00000452979 BRPF1P55201 1214 aaPredicted RBP15.26■□□□□ 0.03
HERC3-207ENST00000452979 SF3B3Q15393 1217 aaKnown RBP15.26■□□□□ 0.03
HERC3-207ENST00000452979 NECTIN2Q92692 538 aa15.26■□□□□ 0.03
HERC3-207ENST00000452979 DPF2Q92785 391 aa15.26■□□□□ 0.03
HERC3-207ENST00000452979 H7C1D1 291 aa15.25■□□□□ 0.03
HERC3-207ENST00000452979 PLBD2Q8NHP8 589 aa15.25■□□□□ 0.03
HERC3-207ENST00000452979 TRPM4Q8TD43 1214 aa15.25■□□□□ 0.03
HERC3-207ENST00000452979 ISCA1Q9BUE6 129 aa15.25■□□□□ 0.03
HERC3-207ENST00000452979 HOXB7P09629 217 aa15.24■□□□□ 0.03
HERC3-207ENST00000452979 KRT24Q2M2I5 525 aa15.24■□□□□ 0.03
HERC3-207ENST00000452979 WASHC4Q2M389 1173 aa15.24■□□□□ 0.03
HERC3-207ENST00000452979 ANKRD13DQ6ZTN6 518 aa15.24■□□□□ 0.03
HERC3-207ENST00000452979 CHPF2Q9P2E5 772 aa15.24■□□□□ 0.03
HERC3-207ENST00000452979 TRIM35Q9UPQ4 493 aa15.24■□□□□ 0.03
HERC3-207ENST00000452979 SHTN1A0MZ66 631 aa15.23■□□□□ 0.03
HERC3-207ENST00000452979 TRIM28Q13263 835 aaKnown RBP15.23■□□□□ 0.03
HERC3-207ENST00000452979 USP48Q86UV5 1035 aa15.23■□□□□ 0.03
HERC3-207ENST00000452979 MICALL2Q8IY33 904 aa15.23■□□□□ 0.03
HERC3-207ENST00000452979 CELF1Q92879 486 aaKnown RBP15.23■□□□□ 0.03
HERC3-207ENST00000452979 NSFL1CQ9UNZ2 370 aaKnown RBP15.23■□□□□ 0.03
HERC3-207ENST00000452979 POLR2AP24928 1970 aaKnown RBP15.23■□□□□ 0.03
HERC3-207ENST00000452979 CCDC85CA6NKD9 419 aa15.22■□□□□ 0.03
HERC3-207ENST00000452979 FAM89AQ96GI7 184 aa15.22■□□□□ 0.03
HERC3-207ENST00000452979 DBF4Q9UBU7 674 aaPredicted RBP15.22■□□□□ 0.03
HERC3-207ENST00000452979 POLLQ9UGP5 575 aa15.22■□□□□ 0.03
HERC3-207ENST00000452979 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
HERC3-207ENST00000452979 ZBTB12Q9Y330 459 aaPredicted RBP15.22■□□□□ 0.03
HERC3-207ENST00000452979 CASP8AP2Q9UKL3 1982 aa15.22■□□□□ 0.03
HERC3-207ENST00000452979 PSMD14O00487 310 aa15.21■□□□□ 0.03
HERC3-207ENST00000452979 RPS12P25398 132 aaKnown RBP15.21■□□□□ 0.03
HERC3-207ENST00000452979 GPSM2P81274 684 aa15.21■□□□□ 0.03
HERC3-207ENST00000452979 NOGQ13253 232 aa15.21■□□□□ 0.03
HERC3-207ENST00000452979 FAM161AQ3B820 660 aa15.21■□□□□ 0.03
HERC3-207ENST00000452979 HDGFL1Q5TGJ6 251 aa15.21■□□□□ 0.03
HERC3-207ENST00000452979 SAMD7Q7Z3H4 446 aa15.21■□□□□ 0.03
HERC3-207ENST00000452979 RUNDC1Q96C34 613 aa15.21■□□□□ 0.03
HERC3-207ENST00000452979 ZNF408Q9H9D4 720 aa15.21■□□□□ 0.03
HERC3-207ENST00000452979 COL4A1P02462 1669 aa15.21■□□□□ 0.03
HERC3-207ENST00000452979 NEUROD2Q15784 382 aa15.2■□□□□ 0.02
HERC3-207ENST00000452979 DBNDD1Q9H9R9 158 aa15.2■□□□□ 0.02
HERC3-207ENST00000452979 HYPKQ9NX55 129 aa15.2■□□□□ 0.02
HERC3-207ENST00000452979 FAM155AB1AL88 458 aaPredicted RBP15.19■□□□□ 0.02
HERC3-207ENST00000452979 ATP5J2-PTCD1G3V325 749 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 C6orf229H3BNL8 230 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 RIMBP2O15034 1052 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 EGFRP00533 1210 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 HUNKP57058 714 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
HERC3-207ENST00000452979 MLLT1Q03111 559 aaPredicted RBP15.19■□□□□ 0.02
HERC3-207ENST00000452979 DLK2Q6UY11 383 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 CCDC146Q8IYE0 955 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 TBC1D16Q8TBP0 767 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 ZNF428Q96B54 188 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 ZIC5Q96T25 663 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 EYA3Q99504 573 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 MCOLN1Q9GZU1 580 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 KCNQ5Q9NR82 932 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 LAS1LQ9Y4W2 734 aaKnown RBP15.19■□□□□ 0.02
HERC3-207ENST00000452979 RTL9Q8NET4 1388 aa15.19■□□□□ 0.02
HERC3-207ENST00000452979 MYBBP1AQ9BQG0 1328 aaKnown RBP15.18■□□□□ 0.02
HERC3-207ENST00000452979 IRS4O14654 1257 aaPredicted RBP15.18■□□□□ 0.02
HERC3-207ENST00000452979 ECE2O60344 883 aa15.18■□□□□ 0.02
HERC3-207ENST00000452979 TBC1D10BQ4KMP7 808 aaPredicted RBP15.18■□□□□ 0.02
HERC3-207ENST00000452979 RGMBQ6NW40 437 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms