RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 NLGN2Q8NFZ4 835 aa14.94□□□□□ -0.02
LINC00339-205ENST00000452322 MASTLQ96GX5 879 aa14.94□□□□□ -0.02
LINC00339-205ENST00000452322 CHMP4BQ9H444 224 aaKnown RBP14.94□□□□□ -0.02
LINC00339-205ENST00000452322 GOLGB1Q14789 3259 aaKnown RBP14.93□□□□□ -0.02
LINC00339-205ENST00000452322 A0A0G2JLW4 131 aa14.93□□□□□ -0.02
LINC00339-205ENST00000452322 CSF1RP07333 972 aa14.93□□□□□ -0.02
LINC00339-205ENST00000452322 KCNA3P22001 575 aa14.93□□□□□ -0.02
LINC00339-205ENST00000452322 HOXA10P31260 410 aaPredicted RBP14.93□□□□□ -0.02
LINC00339-205ENST00000452322 FOXO4P98177 505 aa14.93□□□□□ -0.02
LINC00339-205ENST00000452322 CCDC152Q4G0S7 254 aa14.93□□□□□ -0.02
LINC00339-205ENST00000452322 STYK1Q6J9G0 422 aa14.93□□□□□ -0.02
LINC00339-205ENST00000452322 TTLL11Q8NHH1 800 aa14.93□□□□□ -0.02
LINC00339-205ENST00000452322 RPGRQ92834 1020 aaKnown RBP14.93□□□□□ -0.02
LINC00339-205ENST00000452322 KAZALD1Q96I82 304 aa14.93□□□□□ -0.02
LINC00339-205ENST00000452322 BRCA1P38398 1863 aaKnown RBP14.93□□□□□ -0.02
LINC00339-205ENST00000452322 RABL6Q3YEC7 729 aaPredicted RBP14.92□□□□□ -0.02
LINC00339-205ENST00000452322 EPHA10Q5JZY3 1008 aa14.92□□□□□ -0.02
LINC00339-205ENST00000452322 BICC1Q9H694 974 aaKnown RBP14.92□□□□□ -0.02
LINC00339-205ENST00000452322 RTL9Q8NET4 1388 aa14.92□□□□□ -0.02
LINC00339-205ENST00000452322 GNAI2P04899 355 aa14.91□□□□□ -0.02
LINC00339-205ENST00000452322 DDX46Q7L014 1031 aaKnown RBP14.91□□□□□ -0.02
LINC00339-205ENST00000452322 ZNF622Q969S3 477 aaKnown RBP eCLIP14.91□□□□□ -0.02
LINC00339-205ENST00000452322 RBM17Q96I25 401 aaKnown RBP14.91□□□□□ -0.02
LINC00339-205ENST00000452322 CRAMP1Q96RY5 1269 aa14.91□□□□□ -0.02
LINC00339-205ENST00000452322 LRRFIP2Q9Y608 721 aaKnown RBP14.91□□□□□ -0.02
LINC00339-205ENST00000452322 ALDH1B1P30837 517 aa14.9□□□□□ -0.02
LINC00339-205ENST00000452322 LMBR1LQ6UX01 489 aa14.9□□□□□ -0.02
LINC00339-205ENST00000452322 ANKRD44Q8N8A2 993 aa14.9□□□□□ -0.02
LINC00339-205ENST00000452322 CNKSR1Q969H4 720 aa14.9□□□□□ -0.02
LINC00339-205ENST00000452322 GREM2Q9H772 168 aa14.9□□□□□ -0.02
LINC00339-205ENST00000452322 PIM2Q9P1W9 311 aa14.9□□□□□ -0.02
LINC00339-205ENST00000452322 FAM161AQ3B820 660 aa14.89□□□□□ -0.03
LINC00339-205ENST00000452322 TTLL6Q8N841 843 aa14.89□□□□□ -0.03
LINC00339-205ENST00000452322 CCDC85AQ96PX6 553 aaPredicted RBP14.89□□□□□ -0.03
LINC00339-205ENST00000452322 ZBTB40Q9NUA8 1239 aa14.89□□□□□ -0.03
LINC00339-205ENST00000452322 GRAPQ13588 217 aa14.88□□□□□ -0.03
LINC00339-205ENST00000452322 GRAPLQ8TC17 118 aaPredicted RBP14.88□□□□□ -0.03
LINC00339-205ENST00000452322 CRBNQ96SW2 442 aa14.88□□□□□ -0.03
LINC00339-205ENST00000452322 CHMP3Q9Y3E7 222 aa14.88□□□□□ -0.03
LINC00339-205ENST00000452322 CACNA1SQ13698 1873 aa14.87□□□□□ -0.03
LINC00339-205ENST00000452322 ITGA6P23229 1130 aa14.87□□□□□ -0.03
LINC00339-205ENST00000452322 IFIT5Q13325 482 aaKnown RBP14.87□□□□□ -0.03
LINC00339-205ENST00000452322 MTX1Q13505 466 aa14.87□□□□□ -0.03
LINC00339-205ENST00000452322 DALRD3Q5D0E6 543 aaKnown RBP14.87□□□□□ -0.03
LINC00339-205ENST00000452322 PRPF40BQ6NWY9 871 aaKnown RBP14.87□□□□□ -0.03
LINC00339-205ENST00000452322 CDC5LQ99459 802 aaKnown RBP14.87□□□□□ -0.03
LINC00339-205ENST00000452322 SEC31BQ9NQW1 1179 aa14.87□□□□□ -0.03
LINC00339-205ENST00000452322 COL4A1P02462 1669 aa14.86□□□□□ -0.03
LINC00339-205ENST00000452322 ANKRD18BA2A2Z9 1011 aa14.86□□□□□ -0.03
LINC00339-205ENST00000452322 BBOX1O75936 387 aa14.86□□□□□ -0.03
LINC00339-205ENST00000452322 CCDC57Q2TAC2 916 aa14.86□□□□□ -0.03
LINC00339-205ENST00000452322 CELF1Q92879 486 aaKnown RBP14.86□□□□□ -0.03
LINC00339-205ENST00000452322 C1orf115Q9H7X2 142 aa14.86□□□□□ -0.03
LINC00339-205ENST00000452322 TAF1P21675 1872 aa14.86□□□□□ -0.03
LINC00339-205ENST00000452322 SLX4Q8IY92 1834 aa14.86□□□□□ -0.03
LINC00339-205ENST00000452322 RPS8P62241 208 aaKnown RBP14.85□□□□□ -0.03
LINC00339-205ENST00000452322 TMC4Q7Z404 712 aa14.85□□□□□ -0.03
LINC00339-205ENST00000452322 ANKRD18AQ8IVF6 992 aa14.85□□□□□ -0.03
LINC00339-205ENST00000452322 ARFGEF1Q9Y6D6 1849 aa14.85□□□□□ -0.03
LINC00339-205ENST00000452322 PPEF1O14829 653 aaPredicted RBP14.85□□□□□ -0.03
LINC00339-205ENST00000452322 IGHMBP2P38935 993 aaKnown RBP14.85□□□□□ -0.03
LINC00339-205ENST00000452322 AAMPQ13685 434 aa14.85□□□□□ -0.03
LINC00339-205ENST00000452322 WWC3Q9ULE0 1092 aa14.85□□□□□ -0.03
LINC00339-205ENST00000452322 BCS1LQ9Y276 419 aa14.85□□□□□ -0.03
LINC00339-205ENST00000452322 UTRNP46939 3433 aa14.84□□□□□ -0.03
LINC00339-205ENST00000452322 LRRC37AA6NMS7 1700 aa14.84□□□□□ -0.03
LINC00339-205ENST00000452322 SRGAP3O43295 1099 aa14.84□□□□□ -0.03
LINC00339-205ENST00000452322 RFX5P48382 616 aaPredicted RBP14.84□□□□□ -0.03
LINC00339-205ENST00000452322 CEP85Q6P2H3 762 aa14.84□□□□□ -0.03
LINC00339-205ENST00000452322 C7orf43Q8WVR3 580 aa14.84□□□□□ -0.03
LINC00339-205ENST00000452322 SPEF2Q9C093 1822 aa14.83□□□□□ -0.04
LINC00339-205ENST00000452322 PNMA6EA0A0J9YXQ4 647 aa14.83□□□□□ -0.04
LINC00339-205ENST00000452322 ATP8B2P98198 1209 aa14.83□□□□□ -0.04
LINC00339-205ENST00000452322 TAF7LQ5H9L4 462 aa14.83□□□□□ -0.04
LINC00339-205ENST00000452322 SOGA3Q5TF21 947 aa14.83□□□□□ -0.04
LINC00339-205ENST00000452322 RPAP2Q8IXW5 612 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-205ENST00000452322 MPHOSPH8Q99549 860 aa14.83□□□□□ -0.04
LINC00339-205ENST00000452322 BSDC1Q9NW68 430 aaPredicted RBP14.83□□□□□ -0.04
LINC00339-205ENST00000452322 ATP6V0A2Q9Y487 856 aa14.83□□□□□ -0.04
LINC00339-205ENST00000452322 C21orf2O43822 256 aa14.82□□□□□ -0.04
LINC00339-205ENST00000452322 IRX6P78412 446 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-205ENST00000452322 PTPN12Q05209 780 aaKnown RBP14.82□□□□□ -0.04
LINC00339-205ENST00000452322 CC2D2BQ6DHV5 1058 aa14.82□□□□□ -0.04
LINC00339-205ENST00000452322 SP8Q8IXZ3 490 aa14.82□□□□□ -0.04
LINC00339-205ENST00000452322 EXOC6Q8TAG9 804 aa14.82□□□□□ -0.04
LINC00339-205ENST00000452322 SSH3Q8TE77 659 aa14.82□□□□□ -0.04
LINC00339-205ENST00000452322 TMX4Q9H1E5 349 aaPredicted RBP14.82□□□□□ -0.04
LINC00339-205ENST00000452322 SNED1Q8TER0 1413 aa14.81□□□□□ -0.04
LINC00339-205ENST00000452322 YBX3P16989 372 aaKnown RBP eCLIP14.81□□□□□ -0.04
LINC00339-205ENST00000452322 POLA2Q14181 598 aa14.81□□□□□ -0.04
LINC00339-205ENST00000452322 CCDC93Q567U6 631 aa14.81□□□□□ -0.04
LINC00339-205ENST00000452322 PELP1Q8IZL8 1130 aaKnown RBP14.81□□□□□ -0.04
LINC00339-205ENST00000452322 ZNF594Q96JF6 807 aaPredicted RBP14.81□□□□□ -0.04
LINC00339-205ENST00000452322 COPRSQ9NQ92 184 aa14.81□□□□□ -0.04
LINC00339-205ENST00000452322 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
LINC00339-205ENST00000452322 GPR162Q16538 588 aa14.8□□□□□ -0.04
LINC00339-205ENST00000452322 GRIPAP1Q4V328 841 aa14.8□□□□□ -0.04
LINC00339-205ENST00000452322 LDHAL6AQ6ZMR3 332 aa14.8□□□□□ -0.04
LINC00339-205ENST00000452322 KLHDC4Q8TBB5 520 aa14.8□□□□□ -0.04
LINC00339-205ENST00000452322 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms