RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 IRS2Q9Y4H2 1338 aa8.13□□□□□ -1.11
USP46-202ENST00000451218 GIGYF2Q6Y7W6 1299 aaKnown RBP8.13□□□□□ -1.11
USP46-202ENST00000451218 CCDC191Q8NCU4 936 aa8.13□□□□□ -1.11
USP46-202ENST00000451218 ZBTB47Q9UFB7 747 aaPredicted RBP8.13□□□□□ -1.11
USP46-202ENST00000451218 LRRC24Q50LG9 513 aa8.13□□□□□ -1.11
USP46-202ENST00000451218 PUS3Q9BZE2 481 aaKnown RBP8.13□□□□□ -1.11
USP46-202ENST00000451218 RIC3Q7Z5B4 369 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 DDRGK1Q96HY6 314 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 ZDHHC9Q9Y397 364 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 ZBTB3Q9H5J0 574 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 SPATA31A6Q5VVP1 1343 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 HSPA4P34932 840 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 EVA1CP58658 441 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 SLC51AQ86UW1 340 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 RASEFQ8IZ41 740 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 RAD50Q92878 1312 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 RFX7Q2KHR2 1363 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 MAP4K4O95819 1239 aaPredicted RBP8.12□□□□□ -1.11
USP46-202ENST00000451218 PTH1RQ03431 593 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 TFCP2Q12800 502 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 TNNI3KQ59H18 835 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 EDC3Q96F86 508 aaKnown RBP8.12□□□□□ -1.11
USP46-202ENST00000451218 FPGT-TNNI3KV9GXZ4 949 aa8.12□□□□□ -1.11
USP46-202ENST00000451218 NKX2-3Q8TAU0 364 aa8.11□□□□□ -1.11
USP46-202ENST00000451218 DUOX1Q9NRD9 1551 aa8.11□□□□□ -1.11
USP46-202ENST00000451218 A0A087WZG4 1122 aa8.11□□□□□ -1.11
USP46-202ENST00000451218 PCCAP05165 728 aaPredicted RBP8.11□□□□□ -1.11
USP46-202ENST00000451218 CLEC17AQ6ZS10 378 aa8.11□□□□□ -1.11
USP46-202ENST00000451218 C3orf67Q6ZVT6 689 aa8.11□□□□□ -1.11
USP46-202ENST00000451218 ZNF594Q96JF6 807 aaPredicted RBP8.11□□□□□ -1.11
USP46-202ENST00000451218 CDCA7Q9BWT1 371 aaPredicted RBP8.11□□□□□ -1.11
USP46-202ENST00000451218 DDX58O95786 925 aaKnown RBP8.11□□□□□ -1.11
USP46-202ENST00000451218 NFKBIBQ15653 356 aa8.11□□□□□ -1.11
USP46-202ENST00000451218 SLFNL1Q499Z3 407 aa8.11□□□□□ -1.11
USP46-202ENST00000451218 SMIM5Q71RC9 77 aa8.11□□□□□ -1.11
USP46-202ENST00000451218 ZNF589Q86UQ0 364 aaPredicted RBP8.11□□□□□ -1.11
USP46-202ENST00000451218 RIPOR2Q9Y4F9 1068 aa8.11□□□□□ -1.11
USP46-202ENST00000451218 RTL9Q8NET4 1388 aa8.11□□□□□ -1.11
USP46-202ENST00000451218 KAT6BQ8WYB5 2073 aa8.11□□□□□ -1.11
USP46-202ENST00000451218 NTSR2O95665 410 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 IL6STP40189 918 aaPredicted RBP8.1□□□□□ -1.11
USP46-202ENST00000451218 CRKLP46109 303 aaKnown RBP8.1□□□□□ -1.11
USP46-202ENST00000451218 ZBTB38Q8NAP3 1195 aaPredicted RBP8.1□□□□□ -1.11
USP46-202ENST00000451218 NDUFB9Q9Y6M9 179 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 A0A0D9SFI3 127 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 ERVV-1B6SEH8 477 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 CIAO1O76071 339 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 PKP1Q13835 747 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 LMBR1LQ6UX01 489 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 CHMP4AQ9BY43 222 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 EXOC5O00471 708 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 EPB41L2O43491 1005 aaKnown RBP8.1□□□□□ -1.11
USP46-202ENST00000451218 PIP4K2BP78356 416 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 NECTIN1Q15223 517 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 TTLL11Q8NHH1 800 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 CWC25Q9NXE8 425 aaPredicted RBP8.1□□□□□ -1.11
USP46-202ENST00000451218 C9orf78Q9NZ63 289 aaPredicted RBP8.1□□□□□ -1.11
USP46-202ENST00000451218 ADAMTSL1Q8N6G6 1762 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 HSPA1LP34931 641 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 FAM227BQ96M60 508 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 ABCC12Q96J65 1359 aa8.1□□□□□ -1.11
USP46-202ENST00000451218 LOC102724428A0A0B4J2F2 783 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 ERC2O15083 957 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 TOM1O60784 492 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 SIK1P57059 783 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 SCARF1Q14162 830 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 USPL1Q5W0Q7 1092 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 A0A0G2JLW4 131 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 FGFR2P21802 821 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 DDB1Q16531 1140 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 CERKQ8TCT0 537 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 FRAT2O75474 233 aaPredicted RBP8.09□□□□□ -1.11
USP46-202ENST00000451218 ATP5JP18859 108 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 FAM98CQ17RN3 349 aaKnown RBP8.09□□□□□ -1.11
USP46-202ENST00000451218 ACSBG1Q96GR2 724 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 DBNDD2Q9BQY9 259 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 GPR108Q9NPR9 543 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 PODXL2Q9NZ53 605 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 CNTNAP4Q9C0A0 1308 aa8.09□□□□□ -1.11
USP46-202ENST00000451218 CUL4AQ13619 759 aa8.09□□□□□ -1.12
USP46-202ENST00000451218 SUSD4Q5VX71 490 aa8.09□□□□□ -1.12
USP46-202ENST00000451218 CCDC8Q9H0W5 538 aaPredicted RBP8.09□□□□□ -1.12
USP46-202ENST00000451218 ECHDC1Q9NTX5 307 aa8.09□□□□□ -1.12
USP46-202ENST00000451218 ADCK5Q3MIX3 580 aa8.08□□□□□ -1.12
USP46-202ENST00000451218 FAM89AQ96GI7 184 aa8.08□□□□□ -1.12
USP46-202ENST00000451218 HAUS7Q99871 368 aa8.08□□□□□ -1.12
USP46-202ENST00000451218 SIL1Q9H173 461 aa8.08□□□□□ -1.12
USP46-202ENST00000451218 LRRC4BQ9NT99 713 aa8.08□□□□□ -1.12
USP46-202ENST00000451218 SNX14Q9Y5W7 946 aa8.08□□□□□ -1.12
USP46-202ENST00000451218 KIF13BQ9NQT8 1826 aa8.08□□□□□ -1.12
USP46-202ENST00000451218 WTIPA6NIX2 430 aaPredicted RBP8.08□□□□□ -1.12
USP46-202ENST00000451218 KCNQ4P56696 695 aa8.08□□□□□ -1.12
USP46-202ENST00000451218 GREM2Q9H772 168 aa8.08□□□□□ -1.12
USP46-202ENST00000451218 TAOK2Q9UL54 1235 aa8.08□□□□□ -1.12
USP46-202ENST00000451218 RAB3GAP1Q15042 981 aa8.07□□□□□ -1.12
USP46-202ENST00000451218 SPRYD3Q8NCJ5 442 aa8.07□□□□□ -1.12
USP46-202ENST00000451218 CCDC88AQ3V6T2 1871 aa8.07□□□□□ -1.12
USP46-202ENST00000451218 ADORA1P30542 326 aa8.07□□□□□ -1.12
USP46-202ENST00000451218 AACSQ86V21 672 aa8.07□□□□□ -1.12
USP46-202ENST00000451218 LARGE1O95461 756 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms