RNA–Protein interactions for RNA: ENST00000450720.5

ALMS1P1-202, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1P1, Length 1,601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-202ENST00000450720 ALDH1B1P30837 517 aa20.78■□□□□ 0.92
ALMS1P1-202ENST00000450720 SF3B3Q15393 1217 aaKnown RBP20.78■□□□□ 0.92
ALMS1P1-202ENST00000450720 CCDC152Q4G0S7 254 aa20.78■□□□□ 0.92
ALMS1P1-202ENST00000450720 PRPF40BQ6NWY9 871 aaKnown RBP20.78■□□□□ 0.92
ALMS1P1-202ENST00000450720 UBTFL1P0CB47 393 aaPredicted RBP20.77■□□□□ 0.92
ALMS1P1-202ENST00000450720 SUCLG2Q96I99 432 aa20.77■□□□□ 0.92
ALMS1P1-202ENST00000450720 CHMP3Q9Y3E7 222 aa20.77■□□□□ 0.92
ALMS1P1-202ENST00000450720 LAMB2P55268 1798 aa20.76■□□□□ 0.91
ALMS1P1-202ENST00000450720 UTYO14607 1347 aa20.76■□□□□ 0.91
ALMS1P1-202ENST00000450720 HOXA10P31260 410 aaPredicted RBP20.76■□□□□ 0.91
ALMS1P1-202ENST00000450720 MEIS3Q99687 375 aa20.76■□□□□ 0.91
ALMS1P1-202ENST00000450720 PLA2G12BQ9BX93 195 aa20.76■□□□□ 0.91
ALMS1P1-202ENST00000450720 DLEC1Q9Y238 1755 aa20.76■□□□□ 0.91
ALMS1P1-202ENST00000450720 TTLL11Q8NHH1 800 aa20.75■□□□□ 0.91
ALMS1P1-202ENST00000450720 CRAMP1Q96RY5 1269 aa20.75■□□□□ 0.91
ALMS1P1-202ENST00000450720 UTRNP46939 3433 aa20.75■□□□□ 0.91
ALMS1P1-202ENST00000450720 EPHA10Q5JZY3 1008 aa20.75■□□□□ 0.91
ALMS1P1-202ENST00000450720 GREM2Q9H772 168 aa20.75■□□□□ 0.91
ALMS1P1-202ENST00000450720 C21orf2O43822 256 aa20.74■□□□□ 0.91
ALMS1P1-202ENST00000450720 RRP1P56182 461 aaKnown RBP20.74■□□□□ 0.91
ALMS1P1-202ENST00000450720 FOXO4P98177 505 aa20.74■□□□□ 0.91
ALMS1P1-202ENST00000450720 LMBR1LQ6UX01 489 aa20.74■□□□□ 0.91
ALMS1P1-202ENST00000450720 SEC31BQ9NQW1 1179 aa20.74■□□□□ 0.91
ALMS1P1-202ENST00000450720 GRAPQ13588 217 aa20.73■□□□□ 0.91
ALMS1P1-202ENST00000450720 FAM161AQ3B820 660 aa20.73■□□□□ 0.91
ALMS1P1-202ENST00000450720 C20orf194Q5TEA3 1177 aa20.73■□□□□ 0.91
ALMS1P1-202ENST00000450720 GRAPLQ8TC17 118 aaPredicted RBP20.73■□□□□ 0.91
ALMS1P1-202ENST00000450720 BICC1Q9H694 974 aaKnown RBP20.73■□□□□ 0.91
ALMS1P1-202ENST00000450720 BRCA1P38398 1863 aaKnown RBP20.73■□□□□ 0.91
ALMS1P1-202ENST00000450720 PPEF1O14829 653 aaPredicted RBP20.72■□□□□ 0.91
ALMS1P1-202ENST00000450720 GNAI3P08754 354 aa20.72■□□□□ 0.91
ALMS1P1-202ENST00000450720 COG6Q9Y2V7 657 aa20.72■□□□□ 0.91
ALMS1P1-202ENST00000450720 CELF1Q92879 486 aaKnown RBP20.71■□□□□ 0.91
ALMS1P1-202ENST00000450720 KAZALD1Q96I82 304 aa20.71■□□□□ 0.91
ALMS1P1-202ENST00000450720 HDAC5Q9UQL6 1122 aa20.71■□□□□ 0.91
ALMS1P1-202ENST00000450720 LRRFIP2Q9Y608 721 aaKnown RBP20.71■□□□□ 0.91
ALMS1P1-202ENST00000450720 CACNA1SQ13698 1873 aa20.71■□□□□ 0.91
ALMS1P1-202ENST00000450720 CSF1RP07333 972 aa20.71■□□□□ 0.91
ALMS1P1-202ENST00000450720 ITGA6P23229 1130 aa20.71■□□□□ 0.91
ALMS1P1-202ENST00000450720 PDE3AQ14432 1141 aa20.71■□□□□ 0.91
ALMS1P1-202ENST00000450720 TMX4Q9H1E5 349 aaPredicted RBP20.71■□□□□ 0.91
ALMS1P1-202ENST00000450720 GRIN3BO60391 1043 aa20.7■□□□□ 0.9
ALMS1P1-202ENST00000450720 MVPQ14764 893 aaKnown RBP20.7■□□□□ 0.9
ALMS1P1-202ENST00000450720 OLFM4Q6UX06 510 aa20.7■□□□□ 0.9
ALMS1P1-202ENST00000450720 ARHGAP27Q6ZUM4 889 aa20.7■□□□□ 0.9
ALMS1P1-202ENST00000450720 CDC5LQ99459 802 aaKnown RBP20.7■□□□□ 0.9
ALMS1P1-202ENST00000450720 SLX4Q8IY92 1834 aa20.69■□□□□ 0.9
ALMS1P1-202ENST00000450720 BBOX1O75936 387 aa20.69■□□□□ 0.9
ALMS1P1-202ENST00000450720 RPS8P62241 208 aaKnown RBP20.69■□□□□ 0.9
ALMS1P1-202ENST00000450720 IFIT5Q13325 482 aaKnown RBP20.69■□□□□ 0.9
ALMS1P1-202ENST00000450720 ANKRD18AQ8IVF6 992 aa20.69■□□□□ 0.9
ALMS1P1-202ENST00000450720 MYH3P11055 1940 aa20.68■□□□□ 0.9
ALMS1P1-202ENST00000450720 ANKRD18BA2A2Z9 1011 aa20.68■□□□□ 0.9
ALMS1P1-202ENST00000450720 CCDC57Q2TAC2 916 aa20.68■□□□□ 0.9
ALMS1P1-202ENST00000450720 SLC51AQ86UW1 340 aa20.68■□□□□ 0.9
ALMS1P1-202ENST00000450720 ANKRD44Q8N8A2 993 aa20.68■□□□□ 0.9
ALMS1P1-202ENST00000450720 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
ALMS1P1-202ENST00000450720 GNAI2P04899 355 aa20.67■□□□□ 0.9
ALMS1P1-202ENST00000450720 TAF7LQ5H9L4 462 aa20.67■□□□□ 0.9
ALMS1P1-202ENST00000450720 DDX19BQ9UMR2 479 aa20.67■□□□□ 0.9
ALMS1P1-202ENST00000450720 RTL9Q8NET4 1388 aa20.67■□□□□ 0.9
ALMS1P1-202ENST00000450720 ZBTB7BO15156 539 aaPredicted RBP20.67■□□□□ 0.9
ALMS1P1-202ENST00000450720 IGHMBP2P38935 993 aaKnown RBP20.67■□□□□ 0.9
ALMS1P1-202ENST00000450720 CCDC93Q567U6 631 aa20.67■□□□□ 0.9
ALMS1P1-202ENST00000450720 SOGA3Q5TF21 947 aa20.67■□□□□ 0.9
ALMS1P1-202ENST00000450720 C1orf115Q9H7X2 142 aa20.67■□□□□ 0.9
ALMS1P1-202ENST00000450720 ATP6V0A2Q9Y487 856 aa20.67■□□□□ 0.9
ALMS1P1-202ENST00000450720 TAF1P21675 1872 aa20.66■□□□□ 0.9
ALMS1P1-202ENST00000450720 RABL6Q3YEC7 729 aaPredicted RBP20.66■□□□□ 0.9
ALMS1P1-202ENST00000450720 C7orf43Q8WVR3 580 aa20.66■□□□□ 0.9
ALMS1P1-202ENST00000450720 COL4A1P02462 1669 aa20.66■□□□□ 0.9
ALMS1P1-202ENST00000450720 TMC4Q7Z404 712 aa20.65■□□□□ 0.9
ALMS1P1-202ENST00000450720 MPHOSPH8Q99549 860 aa20.65■□□□□ 0.9
ALMS1P1-202ENST00000450720 ARFGEF1Q9Y6D6 1849 aa20.64■□□□□ 0.9
ALMS1P1-202ENST00000450720 SP8Q8IXZ3 490 aa20.64■□□□□ 0.9
ALMS1P1-202ENST00000450720 ZNF594Q96JF6 807 aaPredicted RBP20.64■□□□□ 0.9
ALMS1P1-202ENST00000450720 RASSF7Q02833 373 aa20.63■□□□□ 0.89
ALMS1P1-202ENST00000450720 CC2D2BQ6DHV5 1058 aa20.63■□□□□ 0.89
ALMS1P1-202ENST00000450720 RTKN2Q8IZC4 609 aa20.63■□□□□ 0.89
ALMS1P1-202ENST00000450720 TAOK3Q9H2K8 898 aa20.62■□□□□ 0.89
ALMS1P1-202ENST00000450720 CHMP4BQ9H444 224 aaKnown RBP20.62■□□□□ 0.89
ALMS1P1-202ENST00000450720 BSDC1Q9NW68 430 aaPredicted RBP20.62■□□□□ 0.89
ALMS1P1-202ENST00000450720 ANKIB1Q9P2G1 1089 aa20.61■□□□□ 0.89
ALMS1P1-202ENST00000450720 NSFL1CQ9UNZ2 370 aaKnown RBP20.61■□□□□ 0.89
ALMS1P1-202ENST00000450720 NFKBIEO00221 500 aa20.6■□□□□ 0.89
ALMS1P1-202ENST00000450720 SRGAP3O43295 1099 aa20.6■□□□□ 0.89
ALMS1P1-202ENST00000450720 DPP8Q6V1X1 898 aaPredicted RBP20.6■□□□□ 0.89
ALMS1P1-202ENST00000450720 LDHAL6AQ6ZMR3 332 aa20.6■□□□□ 0.89
ALMS1P1-202ENST00000450720 MPNDQ8N594 471 aa20.6■□□□□ 0.89
ALMS1P1-202ENST00000450720 KLHDC4Q8TBB5 520 aa20.6■□□□□ 0.89
ALMS1P1-202ENST00000450720 CNNM1Q9NRU3 951 aa20.6■□□□□ 0.89
ALMS1P1-202ENST00000450720 GPSM2P81274 684 aa20.59■□□□□ 0.89
ALMS1P1-202ENST00000450720 FKBP4Q02790 459 aaKnown RBP eCLIP20.59■□□□□ 0.89
ALMS1P1-202ENST00000450720 GRIPAP1Q4V328 841 aa20.59■□□□□ 0.89
ALMS1P1-202ENST00000450720 CRBNQ96SW2 442 aa20.59■□□□□ 0.89
ALMS1P1-202ENST00000450720 SPEF2Q9C093 1822 aa20.58■□□□□ 0.89
ALMS1P1-202ENST00000450720 ZNF277Q9NRM2 450 aaPredicted RBP20.58■□□□□ 0.89
ALMS1P1-202ENST00000450720 ZBTB40Q9NUA8 1239 aa20.58■□□□□ 0.89
ALMS1P1-202ENST00000450720 MINPP1Q9UNW1 487 aa20.58■□□□□ 0.89
ALMS1P1-202ENST00000450720 SIL1Q9H173 461 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms