RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 BBOX1O75936 387 aa23.76■■□□□ 1.39
COPS7B-215ENST00000450501 CASP7P55210 303 aa23.76■■□□□ 1.39
COPS7B-215ENST00000450501 GRAPQ13588 217 aa23.76■■□□□ 1.39
COPS7B-215ENST00000450501 CC2D2BQ6DHV5 1058 aa23.76■■□□□ 1.39
COPS7B-215ENST00000450501 GRAPLQ8TC17 118 aaPredicted RBP23.76■■□□□ 1.39
COPS7B-215ENST00000450501 C9orf78Q9NZ63 289 aaPredicted RBP23.76■■□□□ 1.39
COPS7B-215ENST00000450501 TAF1P21675 1872 aa23.76■■□□□ 1.39
COPS7B-215ENST00000450501 GRM8O00222 908 aa23.75■■□□□ 1.39
COPS7B-215ENST00000450501 IPO8O15397 1037 aaKnown RBP23.75■■□□□ 1.39
COPS7B-215ENST00000450501 BCAR3O75815 825 aa23.75■■□□□ 1.39
COPS7B-215ENST00000450501 CTSWP56202 376 aa23.75■■□□□ 1.39
COPS7B-215ENST00000450501 RTKN2Q8IZC4 609 aa23.75■■□□□ 1.39
COPS7B-215ENST00000450501 PLA2G12BQ9BX93 195 aa23.75■■□□□ 1.39
COPS7B-215ENST00000450501 TMX4Q9H1E5 349 aaPredicted RBP23.75■■□□□ 1.39
COPS7B-215ENST00000450501 NFKBIEO00221 500 aa23.74■■□□□ 1.39
COPS7B-215ENST00000450501 RASSF7Q02833 373 aa23.74■■□□□ 1.39
COPS7B-215ENST00000450501 GRIPAP1Q4V328 841 aa23.74■■□□□ 1.39
COPS7B-215ENST00000450501 TMC4Q7Z404 712 aa23.74■■□□□ 1.39
COPS7B-215ENST00000450501 LTBP3Q9NS15 1303 aa23.74■■□□□ 1.39
COPS7B-215ENST00000450501 CCDC88AQ3V6T2 1871 aa23.73■■□□□ 1.39
COPS7B-215ENST00000450501 TAOK3Q9H2K8 898 aa23.73■■□□□ 1.39
COPS7B-215ENST00000450501 ATP6V0A2Q9Y487 856 aa23.73■■□□□ 1.39
COPS7B-215ENST00000450501 CCT4P50991 539 aaKnown RBP23.72■■□□□ 1.39
COPS7B-215ENST00000450501 OLFM4Q6UX06 510 aa23.72■■□□□ 1.39
COPS7B-215ENST00000450501 TTLL11Q8NHH1 800 aa23.72■■□□□ 1.39
COPS7B-215ENST00000450501 LMNB1P20700 586 aa23.71■■□□□ 1.39
COPS7B-215ENST00000450501 C9orf131Q5VYM1 1079 aa23.71■■□□□ 1.39
COPS7B-215ENST00000450501 PPP4R3CPQ6ZMV5 832 aa23.71■■□□□ 1.39
COPS7B-215ENST00000450501 FRAT1Q92837 279 aaPredicted RBP23.71■■□□□ 1.39
COPS7B-215ENST00000450501 RTL9Q8NET4 1388 aa23.7■■□□□ 1.38
COPS7B-215ENST00000450501 RPS8P62241 208 aaKnown RBP23.7■■□□□ 1.38
COPS7B-215ENST00000450501 SP8Q8IXZ3 490 aa23.7■■□□□ 1.38
COPS7B-215ENST00000450501 CELF1Q92879 486 aaKnown RBP23.7■■□□□ 1.38
COPS7B-215ENST00000450501 CCDC85AQ96PX6 553 aaPredicted RBP23.7■■□□□ 1.38
COPS7B-215ENST00000450501 SEC31BQ9NQW1 1179 aa23.7■■□□□ 1.38
COPS7B-215ENST00000450501 RNF181Q9P0P0 153 aa23.7■■□□□ 1.38
COPS7B-215ENST00000450501 UTYO14607 1347 aa23.69■■□□□ 1.38
COPS7B-215ENST00000450501 FKBP4Q02790 459 aaKnown RBP eCLIP23.69■■□□□ 1.38
COPS7B-215ENST00000450501 ATF7IPQ6VMQ6 1270 aa23.69■■□□□ 1.38
COPS7B-215ENST00000450501 YTHDC1Q96MU7 727 aaKnown RBP23.69■■□□□ 1.38
COPS7B-215ENST00000450501 SNED1Q8TER0 1413 aa23.68■■□□□ 1.38
COPS7B-215ENST00000450501 ZKSCAN2Q63HK3 967 aa23.68■■□□□ 1.38
COPS7B-215ENST00000450501 CDC5LQ99459 802 aaKnown RBP23.68■■□□□ 1.38
COPS7B-215ENST00000450501 PSMD1Q99460 953 aa23.68■■□□□ 1.38
COPS7B-215ENST00000450501 DICER1Q9UPY3 1922 aaKnown RBP23.68■■□□□ 1.38
COPS7B-215ENST00000450501 CSF1RP07333 972 aa23.67■■□□□ 1.38
COPS7B-215ENST00000450501 NBPF7P0C2Y1 421 aaPredicted RBP23.67■■□□□ 1.38
COPS7B-215ENST00000450501 TRIM27P14373 513 aa23.67■■□□□ 1.38
COPS7B-215ENST00000450501 GREM2Q9H772 168 aa23.67■■□□□ 1.38
COPS7B-215ENST00000450501 LRRC37AA6NMS7 1700 aa23.67■■□□□ 1.38
COPS7B-215ENST00000450501 ANKRD18AQ8IVF6 992 aa23.66■■□□□ 1.38
COPS7B-215ENST00000450501 USP44Q9H0E7 712 aa23.66■■□□□ 1.38
COPS7B-215ENST00000450501 COL4A1P02462 1669 aa23.65■■□□□ 1.38
COPS7B-215ENST00000450501 PRELPP51888 382 aa23.65■■□□□ 1.38
COPS7B-215ENST00000450501 FOXO4P98177 505 aa23.65■■□□□ 1.38
COPS7B-215ENST00000450501 ZC3H4Q9UPT8 1303 aaKnown RBP23.64■■□□□ 1.38
COPS7B-215ENST00000450501 FAM161AQ3B820 660 aa23.64■■□□□ 1.37
COPS7B-215ENST00000450501 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
COPS7B-215ENST00000450501 SLC51AQ86UW1 340 aa23.64■■□□□ 1.37
COPS7B-215ENST00000450501 MPNDQ8N594 471 aa23.64■■□□□ 1.37
COPS7B-215ENST00000450501 ITGA6P23229 1130 aa23.63■■□□□ 1.37
COPS7B-215ENST00000450501 EPHA10Q5JZY3 1008 aa23.63■■□□□ 1.37
COPS7B-215ENST00000450501 LMBR1LQ6UX01 489 aa23.63■■□□□ 1.37
COPS7B-215ENST00000450501 DPP8Q6V1X1 898 aaPredicted RBP23.63■■□□□ 1.37
COPS7B-215ENST00000450501 TIAM2Q8IVF5 1701 aa23.63■■□□□ 1.37
COPS7B-215ENST00000450501 SUPT20HQ8NEM7 779 aa23.63■■□□□ 1.37
COPS7B-215ENST00000450501 SUCLG2Q96I99 432 aa23.63■■□□□ 1.37
COPS7B-215ENST00000450501 ZNF277Q9NRM2 450 aaPredicted RBP23.63■■□□□ 1.37
COPS7B-215ENST00000450501 CHMP3Q9Y3E7 222 aa23.63■■□□□ 1.37
COPS7B-215ENST00000450501 SPEF2Q9C093 1822 aa23.62■■□□□ 1.37
COPS7B-215ENST00000450501 CLUAP1Q96AJ1 413 aa23.62■■□□□ 1.37
COPS7B-215ENST00000450501 RCAN3Q9UKA8 241 aa23.62■■□□□ 1.37
COPS7B-215ENST00000450501 ANKRD18BA2A2Z9 1011 aa23.61■■□□□ 1.37
COPS7B-215ENST00000450501 IGHMBP2P38935 993 aaKnown RBP23.61■■□□□ 1.37
COPS7B-215ENST00000450501 IARSP41252 1262 aaKnown RBP23.61■■□□□ 1.37
COPS7B-215ENST00000450501 IFIT5Q13325 482 aaKnown RBP23.61■■□□□ 1.37
COPS7B-215ENST00000450501 ZNF784Q8NCA9 323 aaPredicted RBP23.61■■□□□ 1.37
COPS7B-215ENST00000450501 HDAC5Q9UQL6 1122 aa23.61■■□□□ 1.37
COPS7B-215ENST00000450501 KAZALD1Q96I82 304 aa23.6■■□□□ 1.37
COPS7B-215ENST00000450501 RTFDC1Q9BY42 306 aaPredicted RBP23.6■■□□□ 1.37
COPS7B-215ENST00000450501 VPS33BQ9H267 617 aa23.6■■□□□ 1.37
COPS7B-215ENST00000450501 BSDC1Q9NW68 430 aaPredicted RBP23.6■■□□□ 1.37
COPS7B-215ENST00000450501 NSFL1CQ9UNZ2 370 aaKnown RBP23.6■■□□□ 1.37
COPS7B-215ENST00000450501 TNNQ9UQP3 1299 aa23.6■■□□□ 1.37
COPS7B-215ENST00000450501 UBTFL1P0CB47 393 aaPredicted RBP23.59■■□□□ 1.37
COPS7B-215ENST00000450501 CCDC57Q2TAC2 916 aa23.59■■□□□ 1.37
COPS7B-215ENST00000450501 FTSJ3Q8IY81 847 aaKnown RBP23.59■■□□□ 1.37
COPS7B-215ENST00000450501 MPHOSPH8Q99549 860 aa23.59■■□□□ 1.37
COPS7B-215ENST00000450501 BICC1Q9H694 974 aaKnown RBP23.59■■□□□ 1.37
COPS7B-215ENST00000450501 RABL6Q3YEC7 729 aaPredicted RBP23.58■■□□□ 1.37
COPS7B-215ENST00000450501 DZIP1LQ8IYY4 767 aaKnown RBP23.58■■□□□ 1.37
COPS7B-215ENST00000450501 GPSM2P81274 684 aa23.57■■□□□ 1.36
COPS7B-215ENST00000450501 JDP2Q8WYK2 163 aa23.57■■□□□ 1.36
COPS7B-215ENST00000450501 PODXL2Q9NZ53 605 aa23.57■■□□□ 1.36
COPS7B-215ENST00000450501 ANKIB1Q9P2G1 1089 aa23.57■■□□□ 1.36
COPS7B-215ENST00000450501 LTBP1Q14766 1721 aa23.56■■□□□ 1.36
COPS7B-215ENST00000450501 GNAI3P08754 354 aa23.56■■□□□ 1.36
COPS7B-215ENST00000450501 TAF7LQ5H9L4 462 aa23.56■■□□□ 1.36
COPS7B-215ENST00000450501 LARGE2Q8N3Y3 721 aa23.56■■□□□ 1.36
COPS7B-215ENST00000450501 ANKRD44Q8N8A2 993 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms