RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 GOLIM4O00461 696 aa15.99■□□□□ 0.15
ITGB4-202ENST00000449880 PIBF1Q8WXW3 757 aa15.99■□□□□ 0.15
ITGB4-202ENST00000449880 DBF4Q9UBU7 674 aaPredicted RBP15.99■□□□□ 0.15
ITGB4-202ENST00000449880 FAM114A1Q8IWE2 563 aa15.99■□□□□ 0.15
ITGB4-202ENST00000449880 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
ITGB4-202ENST00000449880 GDPD2Q9HCC8 539 aa15.99■□□□□ 0.15
ITGB4-202ENST00000449880 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
ITGB4-202ENST00000449880 IPO4Q8TEX9 1081 aaKnown RBP15.99■□□□□ 0.15
ITGB4-202ENST00000449880 TAOK3Q9H2K8 898 aa15.99■□□□□ 0.15
ITGB4-202ENST00000449880 RSPH14Q9UHP6 348 aa15.99■□□□□ 0.15
ITGB4-202ENST00000449880 PCDHB15Q9Y5E8 787 aa15.99■□□□□ 0.15
ITGB4-202ENST00000449880 F13A1P00488 732 aa15.99■□□□□ 0.15
ITGB4-202ENST00000449880 TUBB2AQ13885 445 aa15.99■□□□□ 0.15
ITGB4-202ENST00000449880 TUBB2BQ9BVA1 445 aa15.99■□□□□ 0.15
ITGB4-202ENST00000449880 CAPN2P17655 700 aa15.99■□□□□ 0.15
ITGB4-202ENST00000449880 NSRP1Q9H0G5 558 aaKnown RBP15.99■□□□□ 0.15
ITGB4-202ENST00000449880 ZCCHC11Q5TAX3 1644 aaKnown RBP15.98■□□□□ 0.15
ITGB4-202ENST00000449880 SSBP05455 408 aaKnown RBP eCLIP15.98■□□□□ 0.15
ITGB4-202ENST00000449880 HYPKQ9NX55 129 aa15.98■□□□□ 0.15
ITGB4-202ENST00000449880 AKAP2Q9Y2D5 859 aa15.98■□□□□ 0.15
ITGB4-202ENST00000449880 AIDAQ96BJ3 306 aa15.98■□□□□ 0.15
ITGB4-202ENST00000449880 ZNF830Q96NB3 372 aaPredicted RBP15.98■□□□□ 0.15
ITGB4-202ENST00000449880 RNF123Q5XPI4 1314 aa15.98■□□□□ 0.15
ITGB4-202ENST00000449880 A6NNZ2 444 aa15.98■□□□□ 0.15
ITGB4-202ENST00000449880 EBAG9O00559 213 aa15.98■□□□□ 0.15
ITGB4-202ENST00000449880 TUBB8Q3ZCM7 444 aa15.98■□□□□ 0.15
ITGB4-202ENST00000449880 KDM5DQ9BY66 1539 aa15.98■□□□□ 0.15
ITGB4-202ENST00000449880 CETN2P41208 172 aa15.97■□□□□ 0.15
ITGB4-202ENST00000449880 DNAI1Q9UI46 699 aa15.97■□□□□ 0.15
ITGB4-202ENST00000449880 IDH1O75874 414 aaKnown RBP15.97■□□□□ 0.15
ITGB4-202ENST00000449880 ANKRD24Q8TF21 1146 aa15.97■□□□□ 0.15
ITGB4-202ENST00000449880 MYD88Q99836 296 aa15.97■□□□□ 0.15
ITGB4-202ENST00000449880 TTC12Q9H892 705 aaPredicted RBP15.97■□□□□ 0.15
ITGB4-202ENST00000449880 BLMP54132 1417 aaPredicted RBP15.97■□□□□ 0.15
ITGB4-202ENST00000449880 KDM5AP29375 1690 aaKnown RBP15.97■□□□□ 0.15
ITGB4-202ENST00000449880 PIK3R4Q99570 1358 aa15.97■□□□□ 0.15
ITGB4-202ENST00000449880 C8orf58Q8NAV2 365 aa15.97■□□□□ 0.15
ITGB4-202ENST00000449880 KCNG4Q8TDN1 519 aa15.97■□□□□ 0.15
ITGB4-202ENST00000449880 BICDL1Q6ZP65 573 aa15.96■□□□□ 0.15
ITGB4-202ENST00000449880 TRIM21P19474 475 aaKnown RBP15.96■□□□□ 0.15
ITGB4-202ENST00000449880 WDHD1O75717 1129 aaPredicted RBP15.96■□□□□ 0.15
ITGB4-202ENST00000449880 TYRO3Q06418 890 aa15.96■□□□□ 0.15
ITGB4-202ENST00000449880 CNPY2Q9Y2B0 182 aa15.96■□□□□ 0.14
ITGB4-202ENST00000449880 PPP1R12BO60237 982 aaPredicted RBP15.95■□□□□ 0.14
ITGB4-202ENST00000449880 UBASH3AP57075 661 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 SPAG1Q07617 926 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 METTL24Q5JXM2 366 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 CCDC102BQ68D86 513 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 TRPM2O94759 1503 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 PTPRTO14522 1441 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 ANKRD62A6NC57 917 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 IFIT1P09914 478 aaKnown RBP15.95■□□□□ 0.14
ITGB4-202ENST00000449880 HDXQ7Z353 690 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 CACNA2D4Q7Z3S7 1137 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 ADCY10Q96PN6 1610 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 IFI16Q16666 785 aaKnown RBP15.95■□□□□ 0.14
ITGB4-202ENST00000449880 CAVIN4Q5BKX8 364 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 DDX12PQ92771 950 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 FLT4P35916 1363 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 MICALL1Q8N3F8 863 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 SPINK5Q9NQ38 1064 aaPredicted RBP15.95■□□□□ 0.14
ITGB4-202ENST00000449880 PLXNC1O60486 1568 aa15.95■□□□□ 0.14
ITGB4-202ENST00000449880 ZNF500O60304 480 aaPredicted RBP15.94■□□□□ 0.14
ITGB4-202ENST00000449880 ABCF2Q9UG63 623 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 TNIP1Q15025 636 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 KDM2BQ8NHM5 1336 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 ZPR1O75312 459 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 DNAI2Q9GZS0 605 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 TMOD3Q9NYL9 352 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 CTAGE9A4FU28 777 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 CCDC178Q5BJE1 867 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 ESYT1Q9BSJ8 1104 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 ECHDC1Q9NTX5 307 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 TNNQ9UQP3 1299 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
ITGB4-202ENST00000449880 PHACTR3Q96KR7 559 aa15.93■□□□□ 0.14
ITGB4-202ENST00000449880 ZFYVE16Q7Z3T8 1539 aa15.93■□□□□ 0.14
ITGB4-202ENST00000449880 PTCD1O75127 700 aaKnown RBP15.93■□□□□ 0.14
ITGB4-202ENST00000449880 SDSP20132 328 aa15.93■□□□□ 0.14
ITGB4-202ENST00000449880 MAATS1Q7Z4T9 603 aa15.93■□□□□ 0.14
ITGB4-202ENST00000449880 MRPS27Q92552 414 aaKnown RBP15.93■□□□□ 0.14
ITGB4-202ENST00000449880 MAP3K2Q9Y2U5 619 aa15.93■□□□□ 0.14
ITGB4-202ENST00000449880 CYLC1P35663 651 aaPredicted RBP15.93■□□□□ 0.14
ITGB4-202ENST00000449880 ATL3Q6DD88 541 aa15.93■□□□□ 0.14
ITGB4-202ENST00000449880 POTEDQ86YR6 584 aa15.93■□□□□ 0.14
ITGB4-202ENST00000449880 RMND1Q9NWS8 449 aa15.93■□□□□ 0.14
ITGB4-202ENST00000449880 EDC4Q6P2E9 1401 aaKnown RBP15.93■□□□□ 0.14
ITGB4-202ENST00000449880 IFNL2Q8IZJ0 200 aa15.93■□□□□ 0.14
ITGB4-202ENST00000449880 STMN4Q9H169 189 aaPredicted RBP15.93■□□□□ 0.14
ITGB4-202ENST00000449880 NPHP3Q7Z494 1330 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 USP5P45974 858 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 MTHFSDQ2M296 383 aaKnown RBP15.92■□□□□ 0.14
ITGB4-202ENST00000449880 MSL1Q68DK7 614 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 ARFGAP2Q8N6H7 521 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 RLBP1P12271 317 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 MATR3P43243 847 aaKnown RBP eCLIP15.92■□□□□ 0.14
ITGB4-202ENST00000449880 UTP14CQ5TAP6 766 aaKnown RBP15.92■□□□□ 0.14
ITGB4-202ENST00000449880 C6orf163Q5TEZ5 329 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 PPP1R9BQ96SB3 815 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 VAMP4O75379 141 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms