RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 DDX54Q8TDD1 881 aaKnown RBP10.72□□□□□ -0.69
NPHP1-208ENST00000449600 MKRN1Q9UHC7 482 aaKnown RBP10.72□□□□□ -0.69
NPHP1-208ENST00000449600 ANKRD26Q9UPS8 1709 aa10.72□□□□□ -0.69
NPHP1-208ENST00000449600 A0A0G2JLW4 131 aa10.71□□□□□ -0.69
NPHP1-208ENST00000449600 AVPP01185 164 aa10.71□□□□□ -0.69
NPHP1-208ENST00000449600 METTL3Q86U44 580 aaKnown RBP10.71□□□□□ -0.69
NPHP1-208ENST00000449600 TOR4AQ9NXH8 423 aa10.71□□□□□ -0.69
NPHP1-208ENST00000449600 RNF181Q9P0P0 153 aa10.71□□□□□ -0.69
NPHP1-208ENST00000449600 DACH1Q9UI36 760 aa10.71□□□□□ -0.69
NPHP1-208ENST00000449600 TOGARAM1Q9Y4F4 1720 aa10.71□□□□□ -0.69
NPHP1-208ENST00000449600 KDM6AO15550 1401 aaPredicted RBP10.7□□□□□ -0.7
NPHP1-208ENST00000449600 DIAPH1O60610 1272 aaKnown RBP10.7□□□□□ -0.7
NPHP1-208ENST00000449600 OATP04181 439 aa10.7□□□□□ -0.7
NPHP1-208ENST00000449600 HSPA8P11142 646 aaKnown RBP10.7□□□□□ -0.7
NPHP1-208ENST00000449600 SSFA2P28290 1259 aa10.7□□□□□ -0.7
NPHP1-208ENST00000449600 RPIAP49247 311 aa10.7□□□□□ -0.7
NPHP1-208ENST00000449600 FOXC1Q12948 553 aa10.7□□□□□ -0.7
NPHP1-208ENST00000449600 THAP11Q96EK4 314 aa10.7□□□□□ -0.7
NPHP1-208ENST00000449600 DCAF5Q96JK2 942 aa10.7□□□□□ -0.7
NPHP1-208ENST00000449600 DOT1LQ8TEK3 1739 aa10.7□□□□□ -0.7
NPHP1-208ENST00000449600 USP31Q70CQ4 1352 aa10.69□□□□□ -0.7
NPHP1-208ENST00000449600 ZBED9Q6R2W3 1325 aa10.69□□□□□ -0.7
NPHP1-208ENST00000449600 GLTPD2A6NH11 291 aa10.69□□□□□ -0.7
NPHP1-208ENST00000449600 U2SURPO15042 1029 aaKnown RBP10.69□□□□□ -0.7
NPHP1-208ENST00000449600 U2AF1L5P0DN76 240 aaPredicted RBP10.69□□□□□ -0.7
NPHP1-208ENST00000449600 KCNA3P22001 575 aa10.69□□□□□ -0.7
NPHP1-208ENST00000449600 U2AF1Q01081 240 aaKnown RBP eCLIP10.69□□□□□ -0.7
NPHP1-208ENST00000449600 NGEFQ8N5V2 710 aa10.69□□□□□ -0.7
NPHP1-208ENST00000449600 ADAMTS8Q9UP79 889 aa10.69□□□□□ -0.7
NPHP1-208ENST00000449600 BRCA1P38398 1863 aaKnown RBP10.69□□□□□ -0.7
NPHP1-208ENST00000449600 PDE4DIPQ5VU43 2346 aa10.69□□□□□ -0.7
NPHP1-208ENST00000449600 C4BP0C0L5 1744 aa10.68□□□□□ -0.7
NPHP1-208ENST00000449600 MMP10P09238 476 aa10.68□□□□□ -0.7
NPHP1-208ENST00000449600 DPEP1P16444 411 aa10.68□□□□□ -0.7
NPHP1-208ENST00000449600 AMPHP49418 695 aa10.68□□□□□ -0.7
NPHP1-208ENST00000449600 MORN1Q5T089 497 aa10.68□□□□□ -0.7
NPHP1-208ENST00000449600 POLKQ9UBT6 870 aa10.68□□□□□ -0.7
NPHP1-208ENST00000449600 ARFGEF1Q9Y6D6 1849 aa10.68□□□□□ -0.7
NPHP1-208ENST00000449600 N4BP2Q86UW6 1770 aaPredicted RBP10.67□□□□□ -0.7
NPHP1-208ENST00000449600 KAT6BQ8WYB5 2073 aa10.67□□□□□ -0.7
NPHP1-208ENST00000449600 AK7Q96M32 723 aa10.67□□□□□ -0.7
NPHP1-208ENST00000449600 TAF1LQ8IZX4 1826 aa10.67□□□□□ -0.7
NPHP1-208ENST00000449600 UBR3Q6ZT12 1888 aa10.66□□□□□ -0.7
NPHP1-208ENST00000449600 MAPK8IP3Q9UPT6 1336 aa10.66□□□□□ -0.7
NPHP1-208ENST00000449600 SEMA3EO15041 775 aa10.66□□□□□ -0.7
NPHP1-208ENST00000449600 VEGFBP49765 207 aa10.66□□□□□ -0.7
NPHP1-208ENST00000449600 SMIM5Q71RC9 77 aa10.66□□□□□ -0.7
NPHP1-208ENST00000449600 ANKRD24Q8TF21 1146 aa10.66□□□□□ -0.7
NPHP1-208ENST00000449600 FCF1Q9Y324 198 aaKnown RBP10.66□□□□□ -0.7
NPHP1-208ENST00000449600 PALLDQ8WX93 1383 aa10.65□□□□□ -0.7
NPHP1-208ENST00000449600 HIC1Q14526 733 aa10.65□□□□□ -0.7
NPHP1-208ENST00000449600 RRS1Q15050 365 aaKnown RBP10.65□□□□□ -0.7
NPHP1-208ENST00000449600 PRPF38BQ5VTL8 546 aaKnown RBP10.65□□□□□ -0.7
NPHP1-208ENST00000449600 FAM160A2Q8N612 972 aaPredicted RBP10.65□□□□□ -0.7
NPHP1-208ENST00000449600 RUNDC1Q96C34 613 aa10.65□□□□□ -0.7
NPHP1-208ENST00000449600 PIM2Q9P1W9 311 aa10.65□□□□□ -0.7
NPHP1-208ENST00000449600 EMILIN1Q9Y6C2 1016 aa10.65□□□□□ -0.7
NPHP1-208ENST00000449600 DALRD3Q5D0E6 543 aaKnown RBP10.64□□□□□ -0.71
NPHP1-208ENST00000449600 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
NPHP1-208ENST00000449600 KIF24Q5T7B8 1368 aa10.64□□□□□ -0.71
NPHP1-208ENST00000449600 VIRMAQ69YN4 1812 aaKnown RBP10.63□□□□□ -0.71
NPHP1-208ENST00000449600 PASKQ96RG2 1323 aa10.63□□□□□ -0.71
NPHP1-208ENST00000449600 MAP2K1Q02750 393 aaPredicted RBP10.63□□□□□ -0.71
NPHP1-208ENST00000449600 FUT2Q10981 343 aa10.63□□□□□ -0.71
NPHP1-208ENST00000449600 CCDC146Q8IYE0 955 aa10.63□□□□□ -0.71
NPHP1-208ENST00000449600 ZCRB1Q8TBF4 217 aaKnown RBP10.63□□□□□ -0.71
NPHP1-208ENST00000449600 CCDC87Q9NVE4 849 aa10.63□□□□□ -0.71
NPHP1-208ENST00000449600 GMPR2Q9P2T1 348 aaKnown RBP10.63□□□□□ -0.71
NPHP1-208ENST00000449600 SMG6Q86US8 1419 aaKnown RBP10.63□□□□□ -0.71
NPHP1-208ENST00000449600 FLT4P35916 1363 aa10.63□□□□□ -0.71
NPHP1-208ENST00000449600 SBF1O95248 1867 aa10.62□□□□□ -0.71
NPHP1-208ENST00000449600 LMNB1P20700 586 aa10.62□□□□□ -0.71
NPHP1-208ENST00000449600 FECHP22830 423 aa10.62□□□□□ -0.71
NPHP1-208ENST00000449600 FBLN1P23142 703 aa10.62□□□□□ -0.71
NPHP1-208ENST00000449600 SMCPP49901 116 aaPredicted RBP10.62□□□□□ -0.71
NPHP1-208ENST00000449600 NLGN1Q8N2Q7 840 aa10.62□□□□□ -0.71
NPHP1-208ENST00000449600 DAXXQ9UER7 740 aaPredicted RBP10.62□□□□□ -0.71
NPHP1-208ENST00000449600 MAP2P11137 1827 aaKnown RBP10.62□□□□□ -0.71
NPHP1-208ENST00000449600 MAP3K19Q56UN5 1328 aa10.61□□□□□ -0.71
NPHP1-208ENST00000449600 APAF1O14727 1248 aa10.61□□□□□ -0.71
NPHP1-208ENST00000449600 GPR37O15354 613 aa10.61□□□□□ -0.71
NPHP1-208ENST00000449600 CTC1Q2NKJ3 1217 aa10.61□□□□□ -0.71
NPHP1-208ENST00000449600 PRDM9Q9NQV7 894 aa10.61□□□□□ -0.71
NPHP1-208ENST00000449600 SLC27A5Q9Y2P5 690 aa10.61□□□□□ -0.71
NPHP1-208ENST00000449600 RTL1A6NKG5 1358 aa10.61□□□□□ -0.71
NPHP1-208ENST00000449600 RASSF10A6NK89 507 aa10.6□□□□□ -0.71
NPHP1-208ENST00000449600 AXIN1O15169 862 aa10.6□□□□□ -0.71
NPHP1-208ENST00000449600 CD2BP2O95400 341 aaKnown RBP10.6□□□□□ -0.71
NPHP1-208ENST00000449600 NEFLP07196 543 aa10.6□□□□□ -0.71
NPHP1-208ENST00000449600 IL13P35225 146 aa10.6□□□□□ -0.71
NPHP1-208ENST00000449600 ATP6V1AP38606 617 aa10.6□□□□□ -0.71
NPHP1-208ENST00000449600 CYP4X1Q8N118 509 aa10.6□□□□□ -0.71
NPHP1-208ENST00000449600 SMARCC1Q92922 1105 aaPredicted RBP10.6□□□□□ -0.71
NPHP1-208ENST00000449600 FAM208AQ9UK61 1670 aaKnown RBP10.6□□□□□ -0.71
NPHP1-208ENST00000449600 C4AP0C0L4 1744 aa10.59□□□□□ -0.71
NPHP1-208ENST00000449600 TMEM88BA6NKF7 163 aa10.59□□□□□ -0.71
NPHP1-208ENST00000449600 FMNL1O95466 1100 aaPredicted RBP10.59□□□□□ -0.71
NPHP1-208ENST00000449600 RDH13Q8NBN7 331 aa10.59□□□□□ -0.71
NPHP1-208ENST00000449600 COL3A1P02461 1466 aaPredicted RBP10.58□□□□□ -0.72
NPHP1-208ENST00000449600 HOXC9P31274 260 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms