RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 EXOC6BQ9Y2D4 811 aa18.19■□□□□ 0.5
TNF-208ENST00000449264 APBB1O00213 710 aa18.18■□□□□ 0.5
TNF-208ENST00000449264 C3orf67Q6ZVT6 689 aa18.18■□□□□ 0.5
TNF-208ENST00000449264 TTLL11Q8NHH1 800 aa18.18■□□□□ 0.5
TNF-208ENST00000449264 KLHDC4Q8TBB5 520 aa18.18■□□□□ 0.5
TNF-208ENST00000449264 GREM2Q9H772 168 aa18.18■□□□□ 0.5
TNF-208ENST00000449264 PA2G4Q9UQ80 394 aaKnown RBP18.18■□□□□ 0.5
TNF-208ENST00000449264 SPEF2Q9C093 1822 aa18.18■□□□□ 0.5
TNF-208ENST00000449264 ANKRD31Q8N7Z5 1873 aa18.18■□□□□ 0.5
TNF-208ENST00000449264 ZBTB7AO95365 584 aa18.18■□□□□ 0.5
TNF-208ENST00000449264 CSF1RP07333 972 aa18.18■□□□□ 0.5
TNF-208ENST00000449264 SLC16A10Q8TF71 515 aa18.18■□□□□ 0.5
TNF-208ENST00000449264 SURF6O75683 361 aaKnown RBP18.17■□□□□ 0.5
TNF-208ENST00000449264 CCDC57Q2TAC2 916 aa18.17■□□□□ 0.5
TNF-208ENST00000449264 CCDC152Q4G0S7 254 aa18.17■□□□□ 0.5
TNF-208ENST00000449264 SLC10A5Q5PT55 438 aa18.17■□□□□ 0.5
TNF-208ENST00000449264 GCC1Q96CN9 775 aa18.17■□□□□ 0.5
TNF-208ENST00000449264 SIL1Q9H173 461 aa18.17■□□□□ 0.5
TNF-208ENST00000449264 DCTPP1Q9H773 170 aa18.17■□□□□ 0.5
TNF-208ENST00000449264 IFIT5Q13325 482 aaKnown RBP18.16■□□□□ 0.5
TNF-208ENST00000449264 TAF7LQ5H9L4 462 aa18.16■□□□□ 0.5
TNF-208ENST00000449264 SMC5Q8IY18 1101 aa18.16■□□□□ 0.5
TNF-208ENST00000449264 NLRP3Q96P20 1036 aa18.16■□□□□ 0.5
TNF-208ENST00000449264 BCL11AQ9H165 835 aa18.16■□□□□ 0.5
TNF-208ENST00000449264 TAF1P21675 1872 aa18.16■□□□□ 0.5
TNF-208ENST00000449264 ITGA6P23229 1130 aa18.15■□□□□ 0.5
TNF-208ENST00000449264 RFX5P48382 616 aaPredicted RBP18.15■□□□□ 0.5
TNF-208ENST00000449264 OS9Q13438 667 aaPredicted RBP18.15■□□□□ 0.5
TNF-208ENST00000449264 ZNF594Q96JF6 807 aaPredicted RBP18.15■□□□□ 0.5
TNF-208ENST00000449264 RIC1Q4ADV7 1423 aa18.15■□□□□ 0.5
TNF-208ENST00000449264 PTPN12Q05209 780 aaKnown RBP18.15■□□□□ 0.5
TNF-208ENST00000449264 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
TNF-208ENST00000449264 SF3B3Q15393 1217 aaKnown RBP18.13■□□□□ 0.49
TNF-208ENST00000449264 ANKRD45Q5TZF3 282 aa18.13■□□□□ 0.49
TNF-208ENST00000449264 MTFR1LQ9H019 292 aa18.13■□□□□ 0.49
TNF-208ENST00000449264 COPRSQ9NQ92 184 aa18.13■□□□□ 0.49
TNF-208ENST00000449264 SEC31BQ9NQW1 1179 aa18.13■□□□□ 0.49
TNF-208ENST00000449264 ATF5Q9Y2D1 282 aaPredicted RBP18.13■□□□□ 0.49
TNF-208ENST00000449264 COL4A1P02462 1669 aa18.13■□□□□ 0.49
TNF-208ENST00000449264 RTL9Q8NET4 1388 aa18.13■□□□□ 0.49
TNF-208ENST00000449264 COL11A2P13942 1736 aaPredicted RBP18.12■□□□□ 0.49
TNF-208ENST00000449264 LRP5O75197 1615 aa18.12■□□□□ 0.49
TNF-208ENST00000449264 G3BP1Q13283 466 aaKnown RBP eCLIP18.12■□□□□ 0.49
TNF-208ENST00000449264 SKAP1Q86WV1 359 aa18.12■□□□□ 0.49
TNF-208ENST00000449264 ZBTB47Q9UFB7 747 aaPredicted RBP18.12■□□□□ 0.49
TNF-208ENST00000449264 PDZRN3Q9UPQ7 1066 aa18.12■□□□□ 0.49
TNF-208ENST00000449264 NOP58Q9Y2X3 529 aaKnown RBP18.12■□□□□ 0.49
TNF-208ENST00000449264 HSP90AB4PQ58FF6 505 aa18.11■□□□□ 0.49
TNF-208ENST00000449264 SMARCA5O60264 1052 aaPredicted RBP18.1■□□□□ 0.49
TNF-208ENST00000449264 POLD1P28340 1107 aa18.1■□□□□ 0.49
TNF-208ENST00000449264 RPGRQ92834 1020 aaKnown RBP18.1■□□□□ 0.49
TNF-208ENST00000449264 BRIP1Q9BX63 1249 aa18.1■□□□□ 0.49
TNF-208ENST00000449264 LNPKQ9C0E8 428 aa18.1■□□□□ 0.49
TNF-208ENST00000449264 NUCB1Q02818 461 aa18.09■□□□□ 0.49
TNF-208ENST00000449264 LRRC24Q50LG9 513 aa18.09■□□□□ 0.49
TNF-208ENST00000449264 DDX46Q7L014 1031 aaKnown RBP18.09■□□□□ 0.49
TNF-208ENST00000449264 CDC5LQ99459 802 aaKnown RBP18.09■□□□□ 0.49
TNF-208ENST00000449264 PUS3Q9BZE2 481 aaKnown RBP18.09■□□□□ 0.49
TNF-208ENST00000449264 LRRCC1Q9C099 1032 aa18.09■□□□□ 0.49
TNF-208ENST00000449264 CACNA1SQ13698 1873 aa18.09■□□□□ 0.49
TNF-208ENST00000449264 EYA2O00167 538 aa18.09■□□□□ 0.49
TNF-208ENST00000449264 RAB11FIP3O75154 756 aa18.09■□□□□ 0.49
TNF-208ENST00000449264 CHD1LQ86WJ1 897 aa18.09■□□□□ 0.49
TNF-208ENST00000449264 ERC1Q8IUD2 1116 aa18.09■□□□□ 0.49
TNF-208ENST00000449264 IL1RAPL2Q9NP60 686 aa18.09■□□□□ 0.49
TNF-208ENST00000449264 CNNM1Q9NRU3 951 aa18.09■□□□□ 0.49
TNF-208ENST00000449264 IGHMBP2P38935 993 aaKnown RBP18.08■□□□□ 0.48
TNF-208ENST00000449264 CRY2Q49AN0 593 aa18.08■□□□□ 0.48
TNF-208ENST00000449264 LDHAL6AQ6ZMR3 332 aa18.08■□□□□ 0.48
TNF-208ENST00000449264 RHPN1Q8TCX5 695 aa18.08■□□□□ 0.48
TNF-208ENST00000449264 KIF1BPQ96EK5 621 aa18.08■□□□□ 0.48
TNF-208ENST00000449264 MPHOSPH8Q99549 860 aa18.08■□□□□ 0.48
TNF-208ENST00000449264 C10orf71Q711Q0 1435 aa18.08■□□□□ 0.48
TNF-208ENST00000449264 PDE6BP35913 854 aa18.07■□□□□ 0.48
TNF-208ENST00000449264 ANKRD18AQ8IVF6 992 aa18.07■□□□□ 0.48
TNF-208ENST00000449264 CELF1Q92879 486 aaKnown RBP18.07■□□□□ 0.48
TNF-208ENST00000449264 CIAO1O76071 339 aa18.06■□□□□ 0.48
TNF-208ENST00000449264 SASH1O94885 1247 aa18.06■□□□□ 0.48
TNF-208ENST00000449264 IL15P40933 162 aaPredicted RBP18.06■□□□□ 0.48
TNF-208ENST00000449264 RGS3P49796 1198 aa18.06■□□□□ 0.48
TNF-208ENST00000449264 ATG9AQ7Z3C6 839 aa18.06■□□□□ 0.48
TNF-208ENST00000449264 RBM17Q96I25 401 aaKnown RBP18.06■□□□□ 0.48
TNF-208ENST00000449264 A0A1B0GUL6 1792 aa18.05■□□□□ 0.48
TNF-208ENST00000449264 KIF13BQ9NQT8 1826 aa18.05■□□□□ 0.48
TNF-208ENST00000449264 KLRG2A4D1S0 409 aaPredicted RBP18.05■□□□□ 0.48
TNF-208ENST00000449264 TFCP2Q12800 502 aa18.05■□□□□ 0.48
TNF-208ENST00000449264 FBXO3Q9UK99 471 aa18.05■□□□□ 0.48
TNF-208ENST00000449264 GRAPQ13588 217 aa18.04■□□□□ 0.48
TNF-208ENST00000449264 METTL24Q5JXM2 366 aa18.04■□□□□ 0.48
TNF-208ENST00000449264 C2CD5Q86YS7 1000 aa18.04■□□□□ 0.48
TNF-208ENST00000449264 GRAPLQ8TC17 118 aaPredicted RBP18.04■□□□□ 0.48
TNF-208ENST00000449264 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.04■□□□□ 0.48
TNF-208ENST00000449264 SRGNP10124 158 aa18.03■□□□□ 0.48
TNF-208ENST00000449264 PDE4AP27815 886 aa18.03■□□□□ 0.48
TNF-208ENST00000449264 RPS8P62241 208 aaKnown RBP18.03■□□□□ 0.48
TNF-208ENST00000449264 RIPOR2Q9Y4F9 1068 aa18.03■□□□□ 0.48
TNF-208ENST00000449264 DLEC1Q9Y238 1755 aa18.03■□□□□ 0.48
TNF-208ENST00000449264 H0YIN7 160 aa18.03■□□□□ 0.48
TNF-208ENST00000449264 NPR1P16066 1061 aa18.03■□□□□ 0.48
TNF-208ENST00000449264 CHRNA5P30532 468 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms