RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 GRAPQ13588 217 aa17.79■□□□□ 0.44
PDLIM2-213ENST00000448520 AOC3Q16853 763 aa17.79■□□□□ 0.44
PDLIM2-213ENST00000448520 ANKRD13DQ6ZTN6 518 aa17.79■□□□□ 0.44
PDLIM2-213ENST00000448520 GRAPLQ8TC17 118 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-213ENST00000448520 PRDM10Q9NQV6 1147 aa17.79■□□□□ 0.44
PDLIM2-213ENST00000448520 DBF4Q9UBU7 674 aaPredicted RBP17.79■□□□□ 0.44
PDLIM2-213ENST00000448520 KRT24Q2M2I5 525 aa17.78■□□□□ 0.44
PDLIM2-213ENST00000448520 HDGFL1Q5TGJ6 251 aa17.78■□□□□ 0.44
PDLIM2-213ENST00000448520 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
PDLIM2-213ENST00000448520 ADARB2Q9NS39 739 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-213ENST00000448520 CHPF2Q9P2E5 772 aa17.78■□□□□ 0.44
PDLIM2-213ENST00000448520 COL4A5P29400 1685 aa17.77■□□□□ 0.44
PDLIM2-213ENST00000448520 ANKRD36CQ5JPF3 1778 aa17.77■□□□□ 0.44
PDLIM2-213ENST00000448520 FOXN1O15353 648 aa17.77■□□□□ 0.44
PDLIM2-213ENST00000448520 CTCFP49711 727 aaPredicted RBP17.77■□□□□ 0.44
PDLIM2-213ENST00000448520 HNRNPUQ00839 825 aaKnown RBP eCLIP17.77■□□□□ 0.44
PDLIM2-213ENST00000448520 CXCL9Q07325 125 aa17.77■□□□□ 0.44
PDLIM2-213ENST00000448520 TNIP1Q15025 636 aa17.77■□□□□ 0.44
PDLIM2-213ENST00000448520 HYPKQ9NX55 129 aa17.77■□□□□ 0.44
PDLIM2-213ENST00000448520 WBP1LQ9NX94 342 aa17.77■□□□□ 0.44
PDLIM2-213ENST00000448520 GPRC5DQ9NZD1 345 aa17.77■□□□□ 0.44
PDLIM2-213ENST00000448520 ABT1Q9ULW3 272 aaKnown RBP17.77■□□□□ 0.44
PDLIM2-213ENST00000448520 KIAA2012Q0VF49 1180 aa17.76■□□□□ 0.43
PDLIM2-213ENST00000448520 ISCA1Q9BUE6 129 aa17.76■□□□□ 0.43
PDLIM2-213ENST00000448520 CAPN15O75808 1086 aa17.75■□□□□ 0.43
PDLIM2-213ENST00000448520 MAP2K1Q02750 393 aaPredicted RBP17.75■□□□□ 0.43
PDLIM2-213ENST00000448520 TRIM28Q13263 835 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-213ENST00000448520 SF3B3Q15393 1217 aaKnown RBP17.75■□□□□ 0.43
PDLIM2-213ENST00000448520 CIAPIN1Q6FI81 312 aa17.75■□□□□ 0.43
PDLIM2-213ENST00000448520 SLC51AQ86UW1 340 aa17.75■□□□□ 0.43
PDLIM2-213ENST00000448520 WDR33Q9C0J8 1336 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-213ENST00000448520 ECE1P42892 770 aa17.74■□□□□ 0.43
PDLIM2-213ENST00000448520 DUSP27Q5VZP5 1158 aa17.74■□□□□ 0.43
PDLIM2-213ENST00000448520 CDHR2Q9BYE9 1310 aa17.73■□□□□ 0.43
PDLIM2-213ENST00000448520 LTBP1Q14766 1721 aa17.73■□□□□ 0.43
PDLIM2-213ENST00000448520 HSP90B1P14625 803 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-213ENST00000448520 CALD1Q05682 793 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-213ENST00000448520 ZC3H15Q8WU90 426 aaKnown RBP17.73■□□□□ 0.43
PDLIM2-213ENST00000448520 FAM89AQ96GI7 184 aa17.73■□□□□ 0.43
PDLIM2-213ENST00000448520 BCL2L13Q9BXK5 485 aa17.73■□□□□ 0.43
PDLIM2-213ENST00000448520 CHMP4AQ9BY43 222 aa17.73■□□□□ 0.43
PDLIM2-213ENST00000448520 LAMB2P55268 1798 aa17.72■□□□□ 0.43
PDLIM2-213ENST00000448520 GMPSP49915 693 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-213ENST00000448520 PGAP2Q9UHJ9 254 aa17.72■□□□□ 0.43
PDLIM2-213ENST00000448520 TRPM7Q96QT4 1865 aa17.71■□□□□ 0.43
PDLIM2-213ENST00000448520 ATP5J2-PTCD1G3V325 749 aa17.71■□□□□ 0.43
PDLIM2-213ENST00000448520 ZNF853P0CG23 659 aa17.71■□□□□ 0.43
PDLIM2-213ENST00000448520 CST9Q5W186 159 aa17.71■□□□□ 0.43
PDLIM2-213ENST00000448520 MBIPQ9NS73 344 aa17.71■□□□□ 0.43
PDLIM2-213ENST00000448520 H7C1D1 291 aa17.7■□□□□ 0.42
PDLIM2-213ENST00000448520 RAD17O75943 681 aa17.7■□□□□ 0.42
PDLIM2-213ENST00000448520 GNAI1P63096 354 aa17.7■□□□□ 0.42
PDLIM2-213ENST00000448520 WASHC4Q2M389 1173 aa17.7■□□□□ 0.42
PDLIM2-213ENST00000448520 RIC3Q7Z5B4 369 aa17.7■□□□□ 0.42
PDLIM2-213ENST00000448520 IFT57Q9NWB7 429 aa17.7■□□□□ 0.42
PDLIM2-213ENST00000448520 CNOT7Q9UIV1 285 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-213ENST00000448520 NSFL1CQ9UNZ2 370 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-213ENST00000448520 TAF1P21675 1872 aa17.69■□□□□ 0.42
PDLIM2-213ENST00000448520 TRAF5O00463 557 aa17.69■□□□□ 0.42
PDLIM2-213ENST00000448520 IRS4O14654 1257 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-213ENST00000448520 LBX1P52954 281 aa17.69■□□□□ 0.42
PDLIM2-213ENST00000448520 RPS8P62241 208 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-213ENST00000448520 FMR1Q06787 632 aaKnown RBP eCLIP17.69■□□□□ 0.42
PDLIM2-213ENST00000448520 GOLGA2Q08379 1002 aa17.69■□□□□ 0.42
PDLIM2-213ENST00000448520 DPF2Q92785 391 aa17.69■□□□□ 0.42
PDLIM2-213ENST00000448520 CAPNS2Q96L46 248 aa17.69■□□□□ 0.42
PDLIM2-213ENST00000448520 TLL2Q9Y6L7 1015 aa17.69■□□□□ 0.42
PDLIM2-213ENST00000448520 CDC37L1Q7L3B6 337 aa17.68■□□□□ 0.42
PDLIM2-213ENST00000448520 WWC1Q8IX03 1113 aa17.68■□□□□ 0.42
PDLIM2-213ENST00000448520 ZBTB38Q8NAP3 1195 aaPredicted RBP17.68■□□□□ 0.42
PDLIM2-213ENST00000448520 CELF1Q92879 486 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-213ENST00000448520 GPR101Q96P66 508 aaPredicted RBP17.68■□□□□ 0.42
PDLIM2-213ENST00000448520 EYA3Q99504 573 aa17.68■□□□□ 0.42
PDLIM2-213ENST00000448520 BEGAINQ9BUH8 593 aa17.68■□□□□ 0.42
PDLIM2-213ENST00000448520 YDJCA8MPS7 323 aa17.67■□□□□ 0.42
PDLIM2-213ENST00000448520 C6orf229H3BNL8 230 aa17.67■□□□□ 0.42
PDLIM2-213ENST00000448520 MAP2K2P36507 400 aa17.67■□□□□ 0.42
PDLIM2-213ENST00000448520 PAXIP1Q6ZW49 1069 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-213ENST00000448520 CELF2O95319 508 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-213ENST00000448520 HIRAP54198 1017 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-213ENST00000448520 RTL5Q5HYW3 569 aaPredicted RBP17.66■□□□□ 0.42
PDLIM2-213ENST00000448520 CCDC191Q8NCU4 936 aa17.66■□□□□ 0.42
PDLIM2-213ENST00000448520 ZNF428Q96B54 188 aa17.66■□□□□ 0.42
PDLIM2-213ENST00000448520 HHIPL1Q96JK4 782 aa17.66■□□□□ 0.42
PDLIM2-213ENST00000448520 ZNF521Q96K83 1311 aa17.66■□□□□ 0.42
PDLIM2-213ENST00000448520 HSPA8P11142 646 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-213ENST00000448520 RPS12P25398 132 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-213ENST00000448520 CCDC27Q2M243 656 aa17.65■□□□□ 0.42
PDLIM2-213ENST00000448520 CYP4F22Q6NT55 531 aa17.65■□□□□ 0.42
PDLIM2-213ENST00000448520 SAPCD2Q86UD0 394 aa17.65■□□□□ 0.42
PDLIM2-213ENST00000448520 GLIS2Q9BZE0 524 aaPredicted RBP17.65■□□□□ 0.42
PDLIM2-213ENST00000448520 POLLQ9UGP5 575 aa17.65■□□□□ 0.42
PDLIM2-213ENST00000448520 DDX60Q8IY21 1712 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-213ENST00000448520 ELL2O00472 640 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-213ENST00000448520 PSMD14O00487 310 aa17.64■□□□□ 0.41
PDLIM2-213ENST00000448520 RIMBP2O15034 1052 aa17.64■□□□□ 0.41
PDLIM2-213ENST00000448520 DDX58O95786 925 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-213ENST00000448520 GPSM2P81274 684 aa17.64■□□□□ 0.41
PDLIM2-213ENST00000448520 CCDC30Q5VVM6 783 aa17.64■□□□□ 0.41
PDLIM2-213ENST00000448520 MICALL2Q8IY33 904 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms