RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 ARHGAP45Q92619 1136 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 QRICH2Q9H0J4 1663 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 OPA1O60313 960 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 INPP5BP32019 993 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 RFC1P35251 1148 aaPredicted RBP10.61□□□□□ -0.71
SMC6-207ENST00000448223 DMTNQ08495 405 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 FLIIQ13045 1269 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 WHAMMP3Q1A5X7 153 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 UTP14CQ5TAP6 766 aaKnown RBP10.61□□□□□ -0.71
SMC6-207ENST00000448223 CCDC50Q8IVM0 306 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 TSC1Q92574 1164 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 NSRP1Q9H0G5 558 aaKnown RBP10.61□□□□□ -0.71
SMC6-207ENST00000448223 CSB-PGBD3P0DP91 1061 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 ATP2B1P20020 1258 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 HLTFQ14527 1009 aaKnown RBP eCLIP10.61□□□□□ -0.714e-6■□□□□ 10
SMC6-207ENST00000448223 HSP90AB4PQ58FF6 505 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 CNPY4Q8N129 248 aa10.61□□□□□ -0.71
SMC6-207ENST00000448223 PUS7Q96PZ0 661 aaKnown RBP10.61□□□□□ -0.71
SMC6-207ENST00000448223 NAA15Q9BXJ9 866 aaKnown RBP10.61□□□□□ -0.71
SMC6-207ENST00000448223 CASTP20810 708 aaKnown RBP10.61□□□□□ -0.71
SMC6-207ENST00000448223 HCLS1P14317 486 aaPredicted RBP10.6□□□□□ -0.71
SMC6-207ENST00000448223 CCT4P50991 539 aaKnown RBP10.6□□□□□ -0.71
SMC6-207ENST00000448223 SPA17Q15506 151 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 JAKMIP1Q96N16 626 aaKnown RBP10.6□□□□□ -0.71
SMC6-207ENST00000448223 SSBP05455 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMC6-207ENST00000448223 IL13P35225 146 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 TAF7Q15545 349 aaPredicted RBP10.6□□□□□ -0.71
SMC6-207ENST00000448223 LRSAM1Q6UWE0 723 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 CCDC12Q8WUD4 166 aaPredicted RBP10.6□□□□□ -0.71
SMC6-207ENST00000448223 DHX16O60231 1041 aaKnown RBP10.6□□□□□ -0.71
SMC6-207ENST00000448223 TUBB4AP04350 444 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 PCK1P35558 622 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 PPP2R5AQ15172 486 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 CNTROBQ8N137 903 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 CYP46A1Q9Y6A2 500 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 ACEP12821 1306 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 MSH6P52701 1360 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 CCDC172P0C7W6 258 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 MTHFSDQ2M296 383 aaKnown RBP10.6□□□□□ -0.71
SMC6-207ENST00000448223 TTC12Q9H892 705 aaPredicted RBP10.6□□□□□ -0.71
SMC6-207ENST00000448223 GOPCQ9HD26 462 aa10.6□□□□□ -0.71
SMC6-207ENST00000448223 EFCAB6Q5THR3 1501 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 EIF5P55010 431 aaKnown RBP10.59□□□□□ -0.71
SMC6-207ENST00000448223 PRPF40BQ6NWY9 871 aaKnown RBP10.59□□□□□ -0.71
SMC6-207ENST00000448223 B4GALNT4Q76KP1 1039 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 NECAB1Q8N987 351 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 PALD1Q9ULE6 856 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 ANKRD1Q15327 319 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 PPFIBP2Q8ND30 876 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 FAM114A2Q9NRY5 505 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 PNMA6EA0A0J9YXQ4 647 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 PAF1Q8N7H5 531 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 TFIP11Q9UBB9 837 aaKnown RBP10.59□□□□□ -0.71
SMC6-207ENST00000448223 NSFL1CQ9UNZ2 370 aaKnown RBP10.59□□□□□ -0.71
SMC6-207ENST00000448223 PPP6R1Q9UPN7 881 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 PHACTR2O75167 634 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 LACTBP83111 547 aaPredicted RBP10.59□□□□□ -0.71
SMC6-207ENST00000448223 GIMAP6Q6P9H5 292 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 SRCIN1Q9C0H9 1055 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 CNPY2Q9Y2B0 182 aa10.59□□□□□ -0.71
SMC6-207ENST00000448223 BUB1BO60566 1050 aaPredicted RBP10.58□□□□□ -0.72
SMC6-207ENST00000448223 RPUSD2Q8IZ73 545 aaKnown RBP10.58□□□□□ -0.72
SMC6-207ENST00000448223 KIF2CQ99661 725 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 TMEM63CQ9P1W3 806 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 MYL6BP14649 208 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 PPP1R42Q7Z4L9 355 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 CCDC150Q8NCX0 1101 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 MICAL1Q8TDZ2 1067 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 CCDC8Q9H0W5 538 aaPredicted RBP10.58□□□□□ -0.72
SMC6-207ENST00000448223 PHAXQ9H814 394 aaKnown RBP10.58□□□□□ -0.72
SMC6-207ENST00000448223 DNAI1Q9UI46 699 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 SH2D4BQ5SQS7 431 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 CKAP2LQ8IYA6 745 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 FSD1Q9BTV5 496 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 PPP1R12CQ9BZL4 782 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 STIM2Q9P246 746 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 CTAGE15A4D2H0 777 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 GADD45BO75293 160 aaPredicted RBP10.58□□□□□ -0.72
SMC6-207ENST00000448223 CTAGE8P0CG41 777 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 PEX19P40855 299 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 CCDC158Q5M9N0 1113 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 MPRIPQ6WCQ1 1025 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 TMC6Q7Z403 805 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 CTAGE6Q86UF2 777 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 CTAGE4Q8IX94 777 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 MYRIPQ8NFW9 859 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 ZMAT2Q96NC0 199 aaKnown RBP10.58□□□□□ -0.72
SMC6-207ENST00000448223 TANGO6Q9C0B7 1094 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 EFCC1Q9HA90 598 aa10.58□□□□□ -0.72
SMC6-207ENST00000448223 NOL3O60936 208 aaKnown RBP10.57□□□□□ -0.72
SMC6-207ENST00000448223 FAM173BQ6P4H8 233 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 KLHL34Q8N239 644 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 VIRMAQ69YN4 1812 aaKnown RBP10.57□□□□□ -0.72
SMC6-207ENST00000448223 KIAA1210Q9ULL0 1709 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 SKILP12757 684 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 G3BP1Q13283 466 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMC6-207ENST00000448223 ZSCAN31Q96LW9 406 aaPredicted RBP10.57□□□□□ -0.72
SMC6-207ENST00000448223 LMBRD1Q9NUN5 540 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 ZEB2O60315 1214 aa10.57□□□□□ -0.72
SMC6-207ENST00000448223 ZNF853P0CG23 659 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms