RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 HSP90AB4PQ58FF6 505 aa30.72■■■□□ 2.51
RFFL-206ENST00000447669 COL23A1Q86Y22 540 aaPredicted RBP30.72■■■□□ 2.51
RFFL-206ENST00000447669 PUS3Q9BZE2 481 aaKnown RBP30.72■■■□□ 2.51
RFFL-206ENST00000447669 ANO8Q9HCE9 1232 aaPredicted RBP30.72■■■□□ 2.51
RFFL-206ENST00000447669 LRRC24Q50LG9 513 aa30.71■■■□□ 2.51
RFFL-206ENST00000447669 CCDC57Q2TAC2 916 aa30.71■■■□□ 2.51
RFFL-206ENST00000447669 C3orf67Q6ZVT6 689 aa30.71■■■□□ 2.51
RFFL-206ENST00000447669 NBPF5PQ86XG9 351 aaPredicted RBP30.7■■■□□ 2.51
RFFL-206ENST00000447669 RGPD3A6NKT7 1758 aaPredicted RBP30.7■■■□□ 2.5
RFFL-206ENST00000447669 RGPD4Q7Z3J3 1758 aa30.7■■■□□ 2.5
RFFL-206ENST00000447669 ITGA6P23229 1130 aa30.69■■■□□ 2.5
RFFL-206ENST00000447669 GTF2E1P29083 439 aaPredicted RBP30.69■■■□□ 2.5
RFFL-206ENST00000447669 C8orf34Q49A92 452 aa30.69■■■□□ 2.5
RFFL-206ENST00000447669 ABCC12Q96J65 1359 aa30.69■■■□□ 2.5
RFFL-206ENST00000447669 RGL2O15211 777 aa30.68■■■□□ 2.5
RFFL-206ENST00000447669 IFIT5Q13325 482 aaKnown RBP30.68■■■□□ 2.5
RFFL-206ENST00000447669 SF3B2Q13435 895 aaKnown RBP30.68■■■□□ 2.5
RFFL-206ENST00000447669 TFCP2Q12800 502 aa30.68■■■□□ 2.5
RFFL-206ENST00000447669 ATG9AQ7Z3C6 839 aa30.68■■■□□ 2.5
RFFL-206ENST00000447669 SALL3Q9BXA9 1300 aa30.68■■■□□ 2.5
RFFL-206ENST00000447669 COL24A1Q17RW2 1714 aa30.67■■■□□ 2.5
RFFL-206ENST00000447669 GSPT1P15170 499 aaKnown RBP30.66■■■□□ 2.5
RFFL-206ENST00000447669 PDE1AP54750 535 aa30.66■■■□□ 2.5
RFFL-206ENST00000447669 SEC31BQ9NQW1 1179 aa30.66■■■□□ 2.5
RFFL-206ENST00000447669 ERC1Q8IUD2 1116 aa30.66■■■□□ 2.5
RFFL-206ENST00000447669 BACH2Q9BYV9 841 aa30.66■■■□□ 2.5
RFFL-206ENST00000447669 PNPLA7Q6ZV29 1317 aa30.65■■■□□ 2.5
RFFL-206ENST00000447669 EAF2Q96CJ1 260 aaPredicted RBP30.65■■■□□ 2.5
RFFL-206ENST00000447669 CCDC8Q9H0W5 538 aaPredicted RBP30.64■■■□□ 2.5
RFFL-206ENST00000447669 MX1P20591 662 aa30.64■■■□□ 2.5
RFFL-206ENST00000447669 BAG6P46379 1132 aa30.64■■■□□ 2.5
RFFL-206ENST00000447669 TAF7LQ5H9L4 462 aa30.64■■■□□ 2.5
RFFL-206ENST00000447669 CLASRPQ8N2M8 674 aaKnown RBP30.64■■■□□ 2.5
RFFL-206ENST00000447669 CASZ1Q86V15 1759 aa30.64■■■□□ 2.49
RFFL-206ENST00000447669 TAF1P21675 1872 aa30.63■■■□□ 2.49
RFFL-206ENST00000447669 AACSQ86V21 672 aa30.63■■■□□ 2.49
RFFL-206ENST00000447669 TLR7Q9NYK1 1049 aaKnown RBP30.63■■■□□ 2.49
RFFL-206ENST00000447669 COL4A1P02462 1669 aa30.63■■■□□ 2.49
RFFL-206ENST00000447669 EYA2O00167 538 aa30.63■■■□□ 2.49
RFFL-206ENST00000447669 TPTE2Q6XPS3 522 aa30.63■■■□□ 2.49
RFFL-206ENST00000447669 LAMB2P55268 1798 aa30.62■■■□□ 2.49
RFFL-206ENST00000447669 ANKRD18BA2A2Z9 1011 aa30.62■■■□□ 2.49
RFFL-206ENST00000447669 TTC22Q5TAA0 569 aa30.62■■■□□ 2.49
RFFL-206ENST00000447669 NYXQ9GZU5 481 aa30.62■■■□□ 2.49
RFFL-206ENST00000447669 NPHP1O15259 732 aa30.61■■■□□ 2.49
RFFL-206ENST00000447669 CARMIL3Q8ND23 1372 aa30.61■■■□□ 2.49
RFFL-206ENST00000447669 TM4SF1P30408 202 aa30.61■■■□□ 2.49
RFFL-206ENST00000447669 DDR1Q08345 913 aa30.6■■■□□ 2.49
RFFL-206ENST00000447669 SLC15A2Q16348 729 aa30.6■■■□□ 2.49
RFFL-206ENST00000447669 MSL1Q68DK7 614 aa30.6■■■□□ 2.49
RFFL-206ENST00000447669 HMGB2P26583 209 aaKnown RBP30.59■■■□□ 2.49
RFFL-206ENST00000447669 BMP2KLQ5H9B9 411 aa30.59■■■□□ 2.49
RFFL-206ENST00000447669 LDHAL6AQ6ZMR3 332 aa30.59■■■□□ 2.49
RFFL-206ENST00000447669 SLC10A5Q5PT55 438 aa30.58■■■□□ 2.49
RFFL-206ENST00000447669 IFIT2P09913 472 aaKnown RBP30.57■■■□□ 2.49
RFFL-206ENST00000447669 CCDC152Q4G0S7 254 aa30.57■■■□□ 2.49
RFFL-206ENST00000447669 PDGFDQ9GZP0 370 aaPredicted RBP30.57■■■□□ 2.49
RFFL-206ENST00000447669 OSBPL3Q9H4L5 887 aa30.57■■■□□ 2.49
RFFL-206ENST00000447669 SERPINB2P05120 415 aa30.57■■■□□ 2.48
RFFL-206ENST00000447669 IL15P40933 162 aaPredicted RBP30.57■■■□□ 2.48
RFFL-206ENST00000447669 TNNI3KQ59H18 835 aa30.57■■■□□ 2.48
RFFL-206ENST00000447669 FPGT-TNNI3KV9GXZ4 949 aa30.57■■■□□ 2.48
RFFL-206ENST00000447669 SPEF2Q9C093 1822 aa30.57■■■□□ 2.48
RFFL-206ENST00000447669 SEC24BO95487 1268 aa30.56■■■□□ 2.48
RFFL-206ENST00000447669 PRR5LQ6MZQ0 368 aa30.56■■■□□ 2.48
RFFL-206ENST00000447669 CNBD1Q8NA66 436 aa30.56■■■□□ 2.48
RFFL-206ENST00000447669 STAP2Q9UGK3 403 aa30.56■■■□□ 2.48
RFFL-206ENST00000447669 STK32BQ9NY57 414 aa30.56■■■□□ 2.48
RFFL-206ENST00000447669 CIAO1O76071 339 aa30.55■■■□□ 2.48
RFFL-206ENST00000447669 MAP4K4O95819 1239 aaPredicted RBP30.55■■■□□ 2.48
RFFL-206ENST00000447669 TIMM10P62072 90 aa30.55■■■□□ 2.48
RFFL-206ENST00000447669 CNNM1Q9NRU3 951 aa30.55■■■□□ 2.48
RFFL-206ENST00000447669 RIPOR2Q9Y4F9 1068 aa30.55■■■□□ 2.48
RFFL-206ENST00000447669 TNRC6CQ9HCJ0 1690 aaKnown RBP30.55■■■□□ 2.48
RFFL-206ENST00000447669 POLRMTO00411 1230 aaKnown RBP30.54■■■□□ 2.48
RFFL-206ENST00000447669 PI4K2BQ8TCG2 481 aa30.54■■■□□ 2.48
RFFL-206ENST00000447669 NLRP3Q96P20 1036 aa30.54■■■□□ 2.48
RFFL-206ENST00000447669 HSP90B1P14625 803 aaKnown RBP30.53■■■□□ 2.48
RFFL-206ENST00000447669 SDSP20132 328 aa30.53■■■□□ 2.48
RFFL-206ENST00000447669 SF3B3Q15393 1217 aaKnown RBP30.53■■■□□ 2.48
RFFL-206ENST00000447669 FLAD1Q8NFF5 587 aa30.53■■■□□ 2.48
RFFL-206ENST00000447669 HELBQ8NG08 1087 aaPredicted RBP30.52■■■□□ 2.48
RFFL-206ENST00000447669 DBNLQ9UJU6 430 aaKnown RBP30.52■■■□□ 2.48
RFFL-206ENST00000447669 RBM19Q9Y4C8 960 aaKnown RBP30.52■■■□□ 2.48
RFFL-206ENST00000447669 DBNDD2Q9BQY9 259 aa30.52■■■□□ 2.48
RFFL-206ENST00000447669 NEUROD6Q96NK8 337 aa30.51■■■□□ 2.47
RFFL-206ENST00000447669 CEP126Q9P2H0 1117 aa30.51■■■□□ 2.47
RFFL-206ENST00000447669 RIC1Q4ADV7 1423 aa30.51■■■□□ 2.47
RFFL-206ENST00000447669 METTL24Q5JXM2 366 aa30.5■■■□□ 2.47
RFFL-206ENST00000447669 NLGN1Q8N2Q7 840 aa30.5■■■□□ 2.47
RFFL-206ENST00000447669 CELF1Q92879 486 aaKnown RBP30.49■■■□□ 2.47
RFFL-206ENST00000447669 MPHOSPH8Q99549 860 aa30.49■■■□□ 2.47
RFFL-206ENST00000447669 SNAP23O00161 211 aa30.48■■■□□ 2.47
RFFL-206ENST00000447669 MMP10P09238 476 aa30.48■■■□□ 2.47
RFFL-206ENST00000447669 ECHDC1Q9NTX5 307 aa30.48■■■□□ 2.47
RFFL-206ENST00000447669 RTL9Q8NET4 1388 aa30.48■■■□□ 2.47
RFFL-206ENST00000447669 TRIM6-TRIM34B2RNG4 842 aa30.47■■■□□ 2.47
RFFL-206ENST00000447669 FBXO3Q9UK99 471 aa30.47■■■□□ 2.47
RFFL-206ENST00000447669 A0A1B0GUL7 405 aa30.47■■■□□ 2.47
RFFL-206ENST00000447669 TAF5LO75529 589 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms