RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 NEXNQ0ZGT2 675 aa17.99■□□□□ 0.47
SREBF1-207ENST00000447641 BEND3Q5T5X7 828 aa17.99■□□□□ 0.47
SREBF1-207ENST00000447641 C3orf67Q6ZVT6 689 aa17.99■□□□□ 0.47
SREBF1-207ENST00000447641 LINS1Q8NG48 757 aa17.99■□□□□ 0.47
SREBF1-207ENST00000447641 SCN4AP35499 1836 aa17.98■□□□□ 0.47
SREBF1-207ENST00000447641 CWF19L2Q2TBE0 894 aaKnown RBP17.98■□□□□ 0.47
SREBF1-207ENST00000447641 CNKSR1Q969H4 720 aa17.98■□□□□ 0.47
SREBF1-207ENST00000447641 NLRP3Q96P20 1036 aa17.98■□□□□ 0.47
SREBF1-207ENST00000447641 BCL2L13Q9BXK5 485 aa17.98■□□□□ 0.47
SREBF1-207ENST00000447641 SMC4Q9NTJ3 1288 aa17.98■□□□□ 0.47
SREBF1-207ENST00000447641 H7C1W4 665 aa17.97■□□□□ 0.47
SREBF1-207ENST00000447641 HCLS1P14317 486 aaPredicted RBP17.97■□□□□ 0.47
SREBF1-207ENST00000447641 GCKRQ14397 625 aa17.97■□□□□ 0.47
SREBF1-207ENST00000447641 ZNF622Q969S3 477 aaKnown RBP eCLIP17.97■□□□□ 0.472e-6■□□□□ 11.1
SREBF1-207ENST00000447641 C7orf43Q8WVR3 580 aa17.96■□□□□ 0.47
SREBF1-207ENST00000447641 CRAMP1Q96RY5 1269 aa17.96■□□□□ 0.47
SREBF1-207ENST00000447641 CDHR2Q9BYE9 1310 aa17.96■□□□□ 0.46
SREBF1-207ENST00000447641 IRS4O14654 1257 aaPredicted RBP17.95■□□□□ 0.46
SREBF1-207ENST00000447641 C21orf2O43822 256 aa17.95■□□□□ 0.46
SREBF1-207ENST00000447641 CASP7P55210 303 aa17.95■□□□□ 0.46
SREBF1-207ENST00000447641 SF3B3Q15393 1217 aaKnown RBP17.95■□□□□ 0.46
SREBF1-207ENST00000447641 LTBP3Q9NS15 1303 aa17.95■□□□□ 0.46
SREBF1-207ENST00000447641 ALDH1L1O75891 902 aa17.94■□□□□ 0.46
SREBF1-207ENST00000447641 ALDH1B1P30837 517 aa17.94■□□□□ 0.46
SREBF1-207ENST00000447641 RTL5Q5HYW3 569 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-207ENST00000447641 PRPF40BQ6NWY9 871 aaKnown RBP17.94■□□□□ 0.46
SREBF1-207ENST00000447641 ARHGAP45Q92619 1136 aa17.94■□□□□ 0.46
SREBF1-207ENST00000447641 ZNF219Q9P2Y4 722 aaPredicted RBP17.94■□□□□ 0.46
SREBF1-207ENST00000447641 NOB1Q9ULX3 412 aaKnown RBP17.94■□□□□ 0.46
SREBF1-207ENST00000447641 HSP90B1P14625 803 aaKnown RBP17.93■□□□□ 0.46
SREBF1-207ENST00000447641 JARID2Q92833 1246 aaPredicted RBP17.93■□□□□ 0.46
SREBF1-207ENST00000447641 BCAR3O75815 825 aa17.92■□□□□ 0.46
SREBF1-207ENST00000447641 RPGRQ92834 1020 aaKnown RBP17.92■□□□□ 0.46
SREBF1-207ENST00000447641 RBM17Q96I25 401 aaKnown RBP17.92■□□□□ 0.46
SREBF1-207ENST00000447641 CREBZFQ9NS37 354 aa17.92■□□□□ 0.46
SREBF1-207ENST00000447641 PDE8AO60658 829 aa17.91■□□□□ 0.46
SREBF1-207ENST00000447641 DDNO94850 711 aaPredicted RBP17.91■□□□□ 0.46
SREBF1-207ENST00000447641 UBE3BQ7Z3V4 1068 aa17.91■□□□□ 0.46
SREBF1-207ENST00000447641 PLA2G12BQ9BX93 195 aa17.91■□□□□ 0.46
SREBF1-207ENST00000447641 SRCIN1Q9C0H9 1055 aa17.91■□□□□ 0.46
SREBF1-207ENST00000447641 MKRN1Q9UHC7 482 aaKnown RBP17.91■□□□□ 0.46
SREBF1-207ENST00000447641 MYH3P11055 1940 aa17.91■□□□□ 0.46
SREBF1-207ENST00000447641 KIF16BQ96L93 1317 aa17.91■□□□□ 0.46
SREBF1-207ENST00000447641 PASKQ96RG2 1323 aa17.91■□□□□ 0.46
SREBF1-207ENST00000447641 CNTNAP1P78357 1384 aa17.91■□□□□ 0.46
SREBF1-207ENST00000447641 TAF1P21675 1872 aa17.9■□□□□ 0.46
SREBF1-207ENST00000447641 CHADLQ6NUI6 762 aa17.9■□□□□ 0.46
SREBF1-207ENST00000447641 SLC4A10Q6U841 1118 aa17.9■□□□□ 0.46
SREBF1-207ENST00000447641 UTYO14607 1347 aa17.9■□□□□ 0.46
SREBF1-207ENST00000447641 FOXN1O15353 648 aa17.89■□□□□ 0.45
SREBF1-207ENST00000447641 DPY19L2Q6NUT2 758 aa17.89■□□□□ 0.45
SREBF1-207ENST00000447641 API5Q9BZZ5 524 aaKnown RBP17.89■□□□□ 0.45
SREBF1-207ENST00000447641 TAOK3Q9H2K8 898 aa17.89■□□□□ 0.45
SREBF1-207ENST00000447641 ABCC4O15439 1325 aa17.89■□□□□ 0.45
SREBF1-207ENST00000447641 SNED1Q8TER0 1413 aa17.89■□□□□ 0.45
SREBF1-207ENST00000447641 THSD7BQ9C0I4 1608 aa17.88■□□□□ 0.45
SREBF1-207ENST00000447641 GRM8O00222 908 aa17.88■□□□□ 0.45
SREBF1-207ENST00000447641 BBOX1O75936 387 aa17.88■□□□□ 0.45
SREBF1-207ENST00000447641 SOGA3Q5TF21 947 aa17.88■□□□□ 0.45
SREBF1-207ENST00000447641 TTLL11Q8NHH1 800 aa17.88■□□□□ 0.45
SREBF1-207ENST00000447641 LTBP1Q14766 1721 aa17.88■□□□□ 0.45
SREBF1-207ENST00000447641 IPO8O15397 1037 aaKnown RBP17.87■□□□□ 0.45
SREBF1-207ENST00000447641 CSF1RP07333 972 aa17.87■□□□□ 0.45
SREBF1-207ENST00000447641 CTSWP56202 376 aa17.87■□□□□ 0.45
SREBF1-207ENST00000447641 GRAPQ13588 217 aa17.87■□□□□ 0.45
SREBF1-207ENST00000447641 DDX46Q7L014 1031 aaKnown RBP17.87■□□□□ 0.45
SREBF1-207ENST00000447641 GRAPLQ8TC17 118 aaPredicted RBP17.87■□□□□ 0.45
SREBF1-207ENST00000447641 COL4A1P02462 1669 aa17.87■□□□□ 0.45
SREBF1-207ENST00000447641 COL4A5P29400 1685 aa17.87■□□□□ 0.45
SREBF1-207ENST00000447641 FOXO4P98177 505 aa17.86■□□□□ 0.45
SREBF1-207ENST00000447641 CC2D2BQ6DHV5 1058 aa17.86■□□□□ 0.45
SREBF1-207ENST00000447641 L3MBTL3Q96JM7 780 aaPredicted RBP17.86■□□□□ 0.45
SREBF1-207ENST00000447641 USP44Q9H0E7 712 aa17.86■□□□□ 0.45
SREBF1-207ENST00000447641 ZNF541Q9H0D2 1346 aa17.86■□□□□ 0.45
SREBF1-207ENST00000447641 RTL9Q8NET4 1388 aa17.86■□□□□ 0.45
SREBF1-207ENST00000447641 TRIM27P14373 513 aa17.85■□□□□ 0.45
SREBF1-207ENST00000447641 CCT4P50991 539 aaKnown RBP17.85■□□□□ 0.45
SREBF1-207ENST00000447641 CCDC152Q4G0S7 254 aa17.85■□□□□ 0.45
SREBF1-207ENST00000447641 INTS3Q68E01 1043 aaKnown RBP17.85■□□□□ 0.45
SREBF1-207ENST00000447641 OLFM4Q6UX06 510 aa17.85■□□□□ 0.45
SREBF1-207ENST00000447641 ATF7IPQ6VMQ6 1270 aa17.85■□□□□ 0.45
SREBF1-207ENST00000447641 C9orf78Q9NZ63 289 aaPredicted RBP17.85■□□□□ 0.45
SREBF1-207ENST00000447641 ATP6V0A2Q9Y487 856 aa17.85■□□□□ 0.45
SREBF1-207ENST00000447641 PPEF1O14829 653 aaPredicted RBP17.84■□□□□ 0.45
SREBF1-207ENST00000447641 NBPF7P0C2Y1 421 aaPredicted RBP17.84■□□□□ 0.45
SREBF1-207ENST00000447641 GRIPAP1Q4V328 841 aa17.84■□□□□ 0.45
SREBF1-207ENST00000447641 CCDC93Q567U6 631 aa17.84■□□□□ 0.45
SREBF1-207ENST00000447641 TMC4Q7Z404 712 aa17.84■□□□□ 0.45
SREBF1-207ENST00000447641 SP8Q8IXZ3 490 aa17.84■□□□□ 0.45
SREBF1-207ENST00000447641 RTKN2Q8IZC4 609 aa17.84■□□□□ 0.45
SREBF1-207ENST00000447641 CELF1Q92879 486 aaKnown RBP17.84■□□□□ 0.45
SREBF1-207ENST00000447641 KAZALD1Q96I82 304 aa17.84■□□□□ 0.45
SREBF1-207ENST00000447641 TAF1DQ9H5J8 278 aaPredicted RBP17.84■□□□□ 0.45
SREBF1-207ENST00000447641 SEC31BQ9NQW1 1179 aa17.84■□□□□ 0.45
SREBF1-207ENST00000447641 RPS8P62241 208 aaKnown RBP17.83■□□□□ 0.44
SREBF1-207ENST00000447641 EPHA10Q5JZY3 1008 aa17.83■□□□□ 0.44
SREBF1-207ENST00000447641 SLC51AQ86UW1 340 aa17.83■□□□□ 0.44
SREBF1-207ENST00000447641 LRRC37AA6NMS7 1700 aa17.83■□□□□ 0.44
SREBF1-207ENST00000447641 ITGBL1O95965 494 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-207ENST00000447641 ZKSCAN2Q63HK3 967 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms