RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 IFNL2Q8IZJ0 200 aa11.25□□□□□ -0.61
KLHL3-202ENST00000447439 KCNB2Q92953 911 aa11.25□□□□□ -0.61
KLHL3-202ENST00000447439 ZNF594Q96JF6 807 aaPredicted RBP11.25□□□□□ -0.61
KLHL3-202ENST00000447439 NEUROD6Q96NK8 337 aa11.25□□□□□ -0.61
KLHL3-202ENST00000447439 CCDC85AQ96PX6 553 aaPredicted RBP11.25□□□□□ -0.61
KLHL3-202ENST00000447439 CCDC39Q9UFE4 941 aa11.25□□□□□ -0.61
KLHL3-202ENST00000447439 ZNF330Q9Y3S2 320 aaPredicted RBP11.25□□□□□ -0.61
KLHL3-202ENST00000447439 ZNF142P52746 1687 aaPredicted RBP11.25□□□□□ -0.61
KLHL3-202ENST00000447439 PHF14O94880 888 aa11.24□□□□□ -0.61
KLHL3-202ENST00000447439 SNRPA1P09661 255 aaKnown RBP11.24□□□□□ -0.61
KLHL3-202ENST00000447439 LIG1P18858 919 aa11.24□□□□□ -0.61
KLHL3-202ENST00000447439 RPS6KB1P23443 525 aa11.24□□□□□ -0.61
KLHL3-202ENST00000447439 TTLL7Q6ZT98 887 aa11.24□□□□□ -0.61
KLHL3-202ENST00000447439 TM6SF1Q9BZW5 370 aa11.24□□□□□ -0.61
KLHL3-202ENST00000447439 MED23Q9ULK4 1368 aa11.24□□□□□ -0.61
KLHL3-202ENST00000447439 TIMM10P62072 90 aa11.24□□□□□ -0.61
KLHL3-202ENST00000447439 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
KLHL3-202ENST00000447439 ZBTB3Q9H5J0 574 aa11.24□□□□□ -0.61
KLHL3-202ENST00000447439 C19orf44Q9H6X5 657 aa11.24□□□□□ -0.61
KLHL3-202ENST00000447439 SH2B1Q9NRF2 756 aaPredicted RBP11.24□□□□□ -0.61
KLHL3-202ENST00000447439 A1BGP04217 495 aa11.23□□□□□ -0.61
KLHL3-202ENST00000447439 HSP90B1P14625 803 aaKnown RBP11.23□□□□□ -0.61
KLHL3-202ENST00000447439 ATF3P18847 181 aa11.23□□□□□ -0.61
KLHL3-202ENST00000447439 HSP90AA2PQ14568 343 aaPredicted RBP11.23□□□□□ -0.61
KLHL3-202ENST00000447439 CKAP2LQ8IYA6 745 aa11.23□□□□□ -0.61
KLHL3-202ENST00000447439 HDAC5Q9UQL6 1122 aa11.23□□□□□ -0.61
KLHL3-202ENST00000447439 CAMTA1Q9Y6Y1 1673 aa11.23□□□□□ -0.61
KLHL3-202ENST00000447439 NBPF26B4DH59 902 aa11.23□□□□□ -0.61
KLHL3-202ENST00000447439 CEBPZQ03701 1054 aaKnown RBP11.23□□□□□ -0.61
KLHL3-202ENST00000447439 NBPF14Q5TI25 921 aa11.23□□□□□ -0.61
KLHL3-202ENST00000447439 NBPF10Q6P3W6 841 aaKnown RBP11.23□□□□□ -0.61
KLHL3-202ENST00000447439 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.23□□□□□ -0.61
KLHL3-202ENST00000447439 CHST3Q7LGC8 479 aa11.23□□□□□ -0.61
KLHL3-202ENST00000447439 NBPF15Q8N660 670 aa11.23□□□□□ -0.61
KLHL3-202ENST00000447439 ZNF609O15014 1411 aa11.23□□□□□ -0.61
KLHL3-202ENST00000447439 GOLIM4O00461 696 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 ZNF500O60304 480 aaPredicted RBP11.22□□□□□ -0.61
KLHL3-202ENST00000447439 HS1BP3Q53T59 392 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 SPC24Q8NBT2 197 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 FMNL2Q96PY5 1086 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 OVOS2A0A0G2JMS6 1433 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 HIP1O00291 1037 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 PSMA5P28066 241 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 Q6ZUG5 572 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 COPRSQ9NQ92 184 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 NAP1L2Q9ULW6 460 aaPredicted RBP11.22□□□□□ -0.61
KLHL3-202ENST00000447439 ATP6V1DQ9Y5K8 247 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 TMEM94Q12767 1356 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 SIPA1L3O60292 1781 aaPredicted RBP11.22□□□□□ -0.61
KLHL3-202ENST00000447439 CYP21A2P08686 494 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 LRRC24Q50LG9 513 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 HSP90AB3PQ58FF7 597 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 RNF20Q5VTR2 975 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 STOX1Q6ZVD7 989 aa11.22□□□□□ -0.61
KLHL3-202ENST00000447439 TRPM3Q9HCF6 1732 aaPredicted RBP11.21□□□□□ -0.61
KLHL3-202ENST00000447439 ATP5JP18859 108 aa11.21□□□□□ -0.61
KLHL3-202ENST00000447439 BRF1Q92994 677 aa11.21□□□□□ -0.61
KLHL3-202ENST00000447439 DCAF5Q96JK2 942 aa11.21□□□□□ -0.61
KLHL3-202ENST00000447439 FUCA2Q9BTY2 467 aa11.21□□□□□ -0.61
KLHL3-202ENST00000447439 FTOQ9C0B1 505 aaKnown RBP eCLIP11.21□□□□□ -0.61
KLHL3-202ENST00000447439 TAOK2Q9UL54 1235 aa11.21□□□□□ -0.61
KLHL3-202ENST00000447439 LMTK3Q96Q04 1460 aa11.21□□□□□ -0.62
KLHL3-202ENST00000447439 TSC1Q92574 1164 aa11.21□□□□□ -0.62
KLHL3-202ENST00000447439 NEK1Q96PY6 1258 aa11.21□□□□□ -0.62
KLHL3-202ENST00000447439 PUS3Q9BZE2 481 aaKnown RBP11.21□□□□□ -0.62
KLHL3-202ENST00000447439 FAM13BQ9NYF5 915 aa11.21□□□□□ -0.62
KLHL3-202ENST00000447439 UQCRHLA0A096LP55 91 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 UQCRHP07919 91 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 CASP7P55210 303 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 FGD1P98174 961 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 FOXO4P98177 505 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 SNRKQ9NRH2 765 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 A0A087WWV3 80 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 FAM177BA6PVY3 158 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 TPM2P07951 284 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 CCT2P78371 535 aaKnown RBP11.2□□□□□ -0.62
KLHL3-202ENST00000447439 KRT85P78386 507 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 DNTTIP2Q5QJE6 756 aaKnown RBP11.2□□□□□ -0.62
KLHL3-202ENST00000447439 LUZP1Q86V48 1076 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 DACT1Q9NYF0 836 aa11.2□□□□□ -0.62
KLHL3-202ENST00000447439 ADAMTS7Q9UKP4 1686 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 KDM4FA0A1W2PPD8 638 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 KDM4AO75164 1064 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 GUCY1B3Q02153 619 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 SPATA32Q96LK8 384 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 NCOA5Q9HCD5 579 aaKnown RBP11.19□□□□□ -0.62
KLHL3-202ENST00000447439 HSPA2P54652 639 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 APOBRQ0VD83 1088 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 SCRN1Q12765 414 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 RABL6Q3YEC7 729 aaPredicted RBP11.19□□□□□ -0.62
KLHL3-202ENST00000447439 TTLL5Q6EMB2 1281 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 ATG9AQ7Z3C6 839 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 RAB11FIP4Q86YS3 637 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 PLBD2Q8NHP8 589 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 HAUS7Q99871 368 aa11.19□□□□□ -0.62
KLHL3-202ENST00000447439 GPHNQ9NQX3 736 aaPredicted RBP11.19□□□□□ -0.62
KLHL3-202ENST00000447439 KIAA2012Q0VF49 1180 aa11.18□□□□□ -0.62
KLHL3-202ENST00000447439 MCMDC2Q4G0Z9 681 aa11.18□□□□□ -0.62
KLHL3-202ENST00000447439 TOM1L2Q6ZVM7 507 aa11.18□□□□□ -0.62
KLHL3-202ENST00000447439 MST1RQ04912 1400 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms