RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 RNF181Q9P0P0 153 aa15.11■□□□□ 0.01
RFC4-208ENST00000447345 KIF16BQ96L93 1317 aa15.11■□□□□ 0.01
RFC4-208ENST00000447345 H7C1W4 665 aa15.1■□□□□ 0.01
RFC4-208ENST00000447345 BCAR3O75815 825 aa15.1■□□□□ 0.01
RFC4-208ENST00000447345 HSP90B1P14625 803 aaKnown RBP15.1■□□□□ 0.01
RFC4-208ENST00000447345 CTSWP56202 376 aa15.1■□□□□ 0.01
RFC4-208ENST00000447345 SF3B3Q15393 1217 aaKnown RBP15.1■□□□□ 0.01
RFC4-208ENST00000447345 SOGA3Q5TF21 947 aa15.1■□□□□ 0.01
RFC4-208ENST00000447345 C9orf131Q5VYM1 1079 aa15.1■□□□□ 0.01
RFC4-208ENST00000447345 C7orf43Q8WVR3 580 aa15.1■□□□□ 0.01
RFC4-208ENST00000447345 FRAT1Q92837 279 aaPredicted RBP15.1■□□□□ 0.01
RFC4-208ENST00000447345 TAOK3Q9H2K8 898 aa15.1■□□□□ 0.01
RFC4-208ENST00000447345 LTBP1Q14766 1721 aa15.09■□□□□ 0.01
RFC4-208ENST00000447345 GRM8O00222 908 aa15.09■□□□□ 0.01
RFC4-208ENST00000447345 PRELPP51888 382 aa15.09■□□□□ 0.01
RFC4-208ENST00000447345 GRAPQ13588 217 aa15.09■□□□□ 0.01
RFC4-208ENST00000447345 CCDC152Q4G0S7 254 aa15.09■□□□□ 0.01
RFC4-208ENST00000447345 GRAPLQ8TC17 118 aaPredicted RBP15.09■□□□□ 0.01
RFC4-208ENST00000447345 CELF1Q92879 486 aaKnown RBP15.09■□□□□ 0.01
RFC4-208ENST00000447345 SEC31BQ9NQW1 1179 aa15.09■□□□□ 0.01
RFC4-208ENST00000447345 C9orf78Q9NZ63 289 aaPredicted RBP15.09■□□□□ 0.01
RFC4-208ENST00000447345 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
RFC4-208ENST00000447345 ALDH1L1O75891 902 aa15.08■□□□□ 0
RFC4-208ENST00000447345 CASP7P55210 303 aa15.08■□□□□ 0
RFC4-208ENST00000447345 ZNF526Q8TF50 670 aaPredicted RBP15.08■□□□□ 0
RFC4-208ENST00000447345 DUOX1Q9NRD9 1551 aa15.07■□□□□ 0
RFC4-208ENST00000447345 LMNB1P20700 586 aa15.07■□□□□ 0
RFC4-208ENST00000447345 API5Q9BZZ5 524 aaKnown RBP15.07■□□□□ 0
RFC4-208ENST00000447345 TMX4Q9H1E5 349 aaPredicted RBP15.07■□□□□ 0
RFC4-208ENST00000447345 GREM2Q9H772 168 aa15.07■□□□□ 0
RFC4-208ENST00000447345 TNNQ9UQP3 1299 aa15.07■□□□□ 0
RFC4-208ENST00000447345 FKBP4Q02790 459 aaKnown RBP eCLIP15.06■□□□□ 0
RFC4-208ENST00000447345 FAM161AQ3B820 660 aa15.06■□□□□ 0
RFC4-208ENST00000447345 TTLL11Q8NHH1 800 aa15.06■□□□□ 0
RFC4-208ENST00000447345 ZNF277Q9NRM2 450 aaPredicted RBP15.06■□□□□ 0
RFC4-208ENST00000447345 CHMP3Q9Y3E7 222 aa15.06■□□□□ 0
RFC4-208ENST00000447345 ATP6V0A2Q9Y487 856 aa15.06■□□□□ 0
RFC4-208ENST00000447345 LTBP3Q9NS15 1303 aa15.06■□□□□ 0
RFC4-208ENST00000447345 BBOX1O75936 387 aa15.05■□□□□ -0
RFC4-208ENST00000447345 NBPF7P0C2Y1 421 aaPredicted RBP15.05■□□□□ -0
RFC4-208ENST00000447345 BRPF1P55201 1214 aaPredicted RBP15.05■□□□□ -0
RFC4-208ENST00000447345 RTKN2Q8IZC4 609 aa15.05■□□□□ -0
RFC4-208ENST00000447345 ZNF784Q8NCA9 323 aaPredicted RBP15.05■□□□□ -0
RFC4-208ENST00000447345 COL4A5P29400 1685 aa15.04■□□□□ -0
RFC4-208ENST00000447345 TRIM27P14373 513 aa15.04■□□□□ -0
RFC4-208ENST00000447345 EPHA10Q5JZY3 1008 aa15.04■□□□□ -0
RFC4-208ENST00000447345 CC2D2BQ6DHV5 1058 aa15.04■□□□□ -0
RFC4-208ENST00000447345 CLUAP1Q96AJ1 413 aa15.04■□□□□ -0
RFC4-208ENST00000447345 SUCLG2Q96I99 432 aa15.04■□□□□ -0
RFC4-208ENST00000447345 PLA2G12BQ9BX93 195 aa15.04■□□□□ -0
RFC4-208ENST00000447345 RTL9Q8NET4 1388 aa15.03■□□□□ -0
RFC4-208ENST00000447345 IPO8O15397 1037 aaKnown RBP15.03■□□□□ -0
RFC4-208ENST00000447345 CCT4P50991 539 aaKnown RBP15.03■□□□□ -0
RFC4-208ENST00000447345 RPS8P62241 208 aaKnown RBP15.03■□□□□ -0
RFC4-208ENST00000447345 FOXO4P98177 505 aa15.03■□□□□ -0
RFC4-208ENST00000447345 DPP8Q6V1X1 898 aaPredicted RBP15.03■□□□□ -0
RFC4-208ENST00000447345 ANKRD18AQ8IVF6 992 aa15.03■□□□□ -0
RFC4-208ENST00000447345 SP8Q8IXZ3 490 aa15.03■□□□□ -0
RFC4-208ENST00000447345 CDC5LQ99459 802 aaKnown RBP15.03■□□□□ -0
RFC4-208ENST00000447345 ITGA6P23229 1130 aa15.02■□□□□ -0
RFC4-208ENST00000447345 IARSP41252 1262 aaKnown RBP15.02■□□□□ -0
RFC4-208ENST00000447345 ZKSCAN2Q63HK3 967 aa15.02■□□□□ -0
RFC4-208ENST00000447345 LMBR1LQ6UX01 489 aa15.02■□□□□ -0
RFC4-208ENST00000447345 ATF7IPQ6VMQ6 1270 aa15.02■□□□□ -0
RFC4-208ENST00000447345 TMC4Q7Z404 712 aa15.02■□□□□ -0
RFC4-208ENST00000447345 MPNDQ8N594 471 aa15.02■□□□□ -0
RFC4-208ENST00000447345 PSMD1Q99460 953 aa15.02■□□□□ -0
RFC4-208ENST00000447345 UTYO14607 1347 aa15.01□□□□□ -0.01
RFC4-208ENST00000447345 GPSM2P81274 684 aa15.01□□□□□ -0.01
RFC4-208ENST00000447345 ARHGAP45Q92619 1136 aa15.01□□□□□ -0.01
RFC4-208ENST00000447345 USP44Q9H0E7 712 aa15.01□□□□□ -0.01
RFC4-208ENST00000447345 BICC1Q9H694 974 aaKnown RBP15.01□□□□□ -0.01
RFC4-208ENST00000447345 NSFL1CQ9UNZ2 370 aaKnown RBP15.01□□□□□ -0.01
RFC4-208ENST00000447345 ANKRD18BA2A2Z9 1011 aa15□□□□□ -0.01
RFC4-208ENST00000447345 PPIP5K2O43314 1243 aa15□□□□□ -0.01
RFC4-208ENST00000447345 CSF1RP07333 972 aa15□□□□□ -0.01
RFC4-208ENST00000447345 AOC3Q16853 763 aa15□□□□□ -0.01
RFC4-208ENST00000447345 KAZALD1Q96I82 304 aa15□□□□□ -0.01
RFC4-208ENST00000447345 GPR101Q96P66 508 aaPredicted RBP15□□□□□ -0.01
RFC4-208ENST00000447345 GPBP1L1Q9HC44 474 aaPredicted RBP15□□□□□ -0.01
RFC4-208ENST00000447345 UBTFL1P0CB47 393 aaPredicted RBP14.99□□□□□ -0.01
RFC4-208ENST00000447345 IGHMBP2P38935 993 aaKnown RBP14.99□□□□□ -0.01
RFC4-208ENST00000447345 IFIT5Q13325 482 aaKnown RBP14.99□□□□□ -0.01
RFC4-208ENST00000447345 GRIPAP1Q4V328 841 aa14.99□□□□□ -0.01
RFC4-208ENST00000447345 TAF7LQ5H9L4 462 aa14.99□□□□□ -0.01
RFC4-208ENST00000447345 FTSJ3Q8IY81 847 aaKnown RBP14.99□□□□□ -0.01
RFC4-208ENST00000447345 LARGE2Q8N3Y3 721 aa14.99□□□□□ -0.01
RFC4-208ENST00000447345 MEIS3Q99687 375 aa14.99□□□□□ -0.01
RFC4-208ENST00000447345 ANKIB1Q9P2G1 1089 aa14.99□□□□□ -0.01
RFC4-208ENST00000447345 RCAN3Q9UKA8 241 aa14.99□□□□□ -0.01
RFC4-208ENST00000447345 ZC3H4Q9UPT8 1303 aaKnown RBP14.98□□□□□ -0.01
RFC4-208ENST00000447345 C6orf229H3BNL8 230 aa14.98□□□□□ -0.01
RFC4-208ENST00000447345 CCDC57Q2TAC2 916 aa14.98□□□□□ -0.01
RFC4-208ENST00000447345 INTS3Q68E01 1043 aaKnown RBP14.98□□□□□ -0.01
RFC4-208ENST00000447345 TMEM57Q8N5G2 664 aa14.98□□□□□ -0.01
RFC4-208ENST00000447345 SUPT20HQ8NEM7 779 aa14.98□□□□□ -0.01
RFC4-208ENST00000447345 ZNF594Q96JF6 807 aaPredicted RBP14.98□□□□□ -0.01
RFC4-208ENST00000447345 MPHOSPH8Q99549 860 aa14.98□□□□□ -0.01
RFC4-208ENST00000447345 PSME4Q14997 1843 aa14.98□□□□□ -0.01
RFC4-208ENST00000447345 SCN9AQ15858 1988 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms