RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 DICER1Q9UPY3 1922 aaKnown RBP4.84□□□□□ -1.63
PMS1-215ENST00000447232 FMNL1O95466 1100 aaPredicted RBP4.84□□□□□ -1.63
PMS1-215ENST00000447232 DGKZQ13574 1117 aa4.84□□□□□ -1.63
PMS1-215ENST00000447232 LINC00116Q8NCU8 138 aa4.84□□□□□ -1.63
PMS1-215ENST00000447232 TTC21BQ7Z4L5 1316 aa4.84□□□□□ -1.63
PMS1-215ENST00000447232 RNF19BQ6ZMZ0 732 aa4.84□□□□□ -1.64
PMS1-215ENST00000447232 LDHDQ86WU2 507 aa4.84□□□□□ -1.64
PMS1-215ENST00000447232 BEGAINQ9BUH8 593 aa4.84□□□□□ -1.64
PMS1-215ENST00000447232 CABP1Q9NZU7 370 aa4.84□□□□□ -1.64
PMS1-215ENST00000447232 MEGF6O75095 1541 aa4.84□□□□□ -1.64
PMS1-215ENST00000447232 TMF1P82094 1093 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 MDM2Q00987 491 aaPredicted RBP4.83□□□□□ -1.64
PMS1-215ENST00000447232 ZCRB1Q8TBF4 217 aaKnown RBP4.83□□□□□ -1.64
PMS1-215ENST00000447232 SCN4AP35499 1836 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 TTC21AQ8NDW8 1320 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 PITPNM2Q9BZ72 1349 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 ITGB4P16144 1822 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 A0A0C4DFX4 3053 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 CA12O43570 354 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 GRIPAP1Q4V328 841 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 CCDC102AQ96A19 550 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 PRDM9Q9NQV7 894 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 FCF1Q9Y324 198 aaKnown RBP4.83□□□□□ -1.64
PMS1-215ENST00000447232 DLEC1Q9Y238 1755 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 USP31Q70CQ4 1352 aa4.83□□□□□ -1.64
PMS1-215ENST00000447232 TNFRSF10AO00220 468 aa4.82□□□□□ -1.64
PMS1-215ENST00000447232 NFKBIEO00221 500 aa4.82□□□□□ -1.64
PMS1-215ENST00000447232 GYS1P13807 737 aa4.82□□□□□ -1.64
PMS1-215ENST00000447232 CHRNA5P30532 468 aa4.82□□□□□ -1.64
PMS1-215ENST00000447232 SMARCC1Q92922 1105 aaPredicted RBP4.82□□□□□ -1.64
PMS1-215ENST00000447232 CAPNS2Q96L46 248 aa4.82□□□□□ -1.64
PMS1-215ENST00000447232 PARP3Q9Y6F1 533 aa4.82□□□□□ -1.64
PMS1-215ENST00000447232 KDM4AO75164 1064 aa4.82□□□□□ -1.64
PMS1-215ENST00000447232 SRPK2P78362 688 aaKnown RBP4.82□□□□□ -1.64
PMS1-215ENST00000447232 NBPF15Q8N660 670 aa4.82□□□□□ -1.64
PMS1-215ENST00000447232 GPR101Q96P66 508 aaPredicted RBP4.82□□□□□ -1.64
PMS1-215ENST00000447232 DGAT1O75907 488 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 MAP2K2P36507 400 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 ECE1P42892 770 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 RPIAP49247 311 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 ITPK1Q13572 414 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 TAF1DQ9H5J8 278 aaPredicted RBP4.81□□□□□ -1.64
PMS1-215ENST00000447232 PKD2L1Q9P0L9 805 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 SZT2Q5T011 3432 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 LOC102724428A0A0B4J2F2 783 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 SIK1P57059 783 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 MSS51Q4VC12 460 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 PKDCCQ504Y2 493 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 MPHOSPH9Q99550 1183 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 RGPD2P0DJD1 1756 aa4.81□□□□□ -1.64
PMS1-215ENST00000447232 FER1L6Q2WGJ9 1857 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 LOC105371045A0A1W2PR82 267 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 IQCA1LA6NCM1 817 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 DDNO94850 711 aaPredicted RBP4.8□□□□□ -1.64
PMS1-215ENST00000447232 CD2BP2O95400 341 aaKnown RBP4.8□□□□□ -1.64
PMS1-215ENST00000447232 DDR1Q08345 913 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 TRAPPC3LQ5T215 181 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 CYP4F22Q6NT55 531 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 MPRIPQ6WCQ1 1025 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 HLA-CQ95604 372 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 GPCPD1Q9NPB8 672 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 FAM217BQ9NTX9 383 aaPredicted RBP4.8□□□□□ -1.64
PMS1-215ENST00000447232 ABT1Q9ULW3 272 aaKnown RBP4.8□□□□□ -1.64
PMS1-215ENST00000447232 CGNL1Q0VF96 1302 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 FOXC1Q12948 553 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 NBPF1Q3BBV0 1214 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 Q3C1V9 767 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 ZNF831Q5JPB2 1677 aa4.8□□□□□ -1.64
PMS1-215ENST00000447232 MON2Q7Z3U7 1717 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 CD163L1Q9NR16 1453 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 CLCN1P35523 988 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 MMP16P51512 607 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 ERFEQ4G0M1 354 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 ZNF787Q6DD87 383 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 CNTROBQ8N137 903 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 SLC17A8Q8NDX2 589 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 PIGBQ92521 554 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 IP6K1Q92551 441 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 REPIN1Q9BWE0 567 aaKnown RBP4.79□□□□□ -1.64
PMS1-215ENST00000447232 COL5A3P25940 1745 aaPredicted RBP4.79□□□□□ -1.64
PMS1-215ENST00000447232 SMG6Q86US8 1419 aaKnown RBP4.79□□□□□ -1.64
PMS1-215ENST00000447232 AOC2O75106 756 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 BRPF1P55201 1214 aaPredicted RBP4.79□□□□□ -1.64
PMS1-215ENST00000447232 USP46P62068 366 aa4.79□□□□□ -1.64
PMS1-215ENST00000447232 USB1Q9BQ65 265 aaKnown RBP4.79□□□□□ -1.64
PMS1-215ENST00000447232 DDX21Q9NR30 783 aaKnown RBP eCLIP4.79□□□□□ -1.64
PMS1-215ENST00000447232 RTCBQ9Y3I0 505 aaKnown RBP4.79□□□□□ -1.64
PMS1-215ENST00000447232 MKI67P46013 3256 aaKnown RBP4.78□□□□□ -1.64
PMS1-215ENST00000447232 INSRP06213 1382 aa4.78□□□□□ -1.64
PMS1-215ENST00000447232 KDRP35968 1356 aa4.78□□□□□ -1.64
PMS1-215ENST00000447232 NRXN2Q9P2S2 1712 aa4.78□□□□□ -1.64
PMS1-215ENST00000447232 FAM187AA6NFU0 413 aa4.78□□□□□ -1.64
PMS1-215ENST00000447232 HOXA2O43364 376 aa4.78□□□□□ -1.64
PMS1-215ENST00000447232 MAP1SQ66K74 1059 aaPredicted RBP4.78□□□□□ -1.64
PMS1-215ENST00000447232 TRPM7Q96QT4 1865 aa4.78□□□□□ -1.64
PMS1-215ENST00000447232 COL6A3P12111 3177 aa4.78□□□□□ -1.64
PMS1-215ENST00000447232 MAP3K19Q56UN5 1328 aa4.78□□□□□ -1.64
PMS1-215ENST00000447232 PCDH11XQ9BZA7 1347 aa4.78□□□□□ -1.64
PMS1-215ENST00000447232 PCDH11YQ9BZA8 1340 aa4.78□□□□□ -1.64
PMS1-215ENST00000447232 LTBP3Q9NS15 1303 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms