RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 C9orf78Q9NZ63 289 aaPredicted RBP27.78■■■□□ 2.04
APOE-204ENST00000446996 GRIPAP1Q4V328 841 aa27.77■■■□□ 2.04
APOE-204ENST00000446996 YTHDC1Q96MU7 727 aaKnown RBP27.77■■■□□ 2.04
APOE-204ENST00000446996 ABCC4O15439 1325 aa27.76■■■□□ 2.03
APOE-204ENST00000446996 GRAPQ13588 217 aa27.76■■■□□ 2.03
APOE-204ENST00000446996 TMC4Q7Z404 712 aa27.76■■■□□ 2.03
APOE-204ENST00000446996 GRAPLQ8TC17 118 aaPredicted RBP27.76■■■□□ 2.03
APOE-204ENST00000446996 C21orf2O43822 256 aa27.75■■■□□ 2.03
APOE-204ENST00000446996 CTSWP56202 376 aa27.75■■■□□ 2.03
APOE-204ENST00000446996 INTS3Q68E01 1043 aaKnown RBP27.75■■■□□ 2.03
APOE-204ENST00000446996 ARHGAP27Q6ZUM4 889 aa27.75■■■□□ 2.03
APOE-204ENST00000446996 TTLL11Q8NHH1 800 aa27.75■■■□□ 2.03
APOE-204ENST00000446996 FRAT1Q92837 279 aaPredicted RBP27.75■■■□□ 2.03
APOE-204ENST00000446996 RTL9Q8NET4 1388 aa27.74■■■□□ 2.03
APOE-204ENST00000446996 CSF1RP07333 972 aa27.74■■■□□ 2.03
APOE-204ENST00000446996 TRIM27P14373 513 aa27.74■■■□□ 2.03
APOE-204ENST00000446996 RCAN3Q9UKA8 241 aa27.74■■■□□ 2.03
APOE-204ENST00000446996 FER1L6Q2WGJ9 1857 aa27.74■■■□□ 2.03
APOE-204ENST00000446996 CCDC93Q567U6 631 aa27.72■■■□□ 2.03
APOE-204ENST00000446996 RTKN2Q8IZC4 609 aa27.72■■■□□ 2.03
APOE-204ENST00000446996 USP44Q9H0E7 712 aa27.72■■■□□ 2.03
APOE-204ENST00000446996 LTBP3Q9NS15 1303 aa27.71■■■□□ 2.03
APOE-204ENST00000446996 PPEF1O14829 653 aaPredicted RBP27.71■■■□□ 2.03
APOE-204ENST00000446996 ATP6V0A2Q9Y487 856 aa27.71■■■□□ 2.03
APOE-204ENST00000446996 TAF1P21675 1872 aa27.7■■■□□ 2.03
APOE-204ENST00000446996 NBPF7P0C2Y1 421 aaPredicted RBP27.7■■■□□ 2.02
APOE-204ENST00000446996 SP8Q8IXZ3 490 aa27.7■■■□□ 2.02
APOE-204ENST00000446996 TMX4Q9H1E5 349 aaPredicted RBP27.7■■■□□ 2.02
APOE-204ENST00000446996 HDAC5Q9UQL6 1122 aa27.7■■■□□ 2.02
APOE-204ENST00000446996 SBF1O95248 1867 aa27.7■■■□□ 2.02
APOE-204ENST00000446996 RPS8P62241 208 aaKnown RBP27.69■■■□□ 2.02
APOE-204ENST00000446996 FOXO4P98177 505 aa27.69■■■□□ 2.02
APOE-204ENST00000446996 MS4A1P11836 297 aa27.68■■■□□ 2.02
APOE-204ENST00000446996 CELF1Q92879 486 aaKnown RBP27.68■■■□□ 2.02
APOE-204ENST00000446996 CDC5LQ99459 802 aaKnown RBP27.68■■■□□ 2.02
APOE-204ENST00000446996 ZNF219Q9P2Y4 722 aaPredicted RBP27.68■■■□□ 2.02
APOE-204ENST00000446996 SNED1Q8TER0 1413 aa27.67■■■□□ 2.02
APOE-204ENST00000446996 NFKBIEO00221 500 aa27.66■■■□□ 2.02
APOE-204ENST00000446996 GREM2Q9H772 168 aa27.66■■■□□ 2.02
APOE-204ENST00000446996 SEC31BQ9NQW1 1179 aa27.66■■■□□ 2.02
APOE-204ENST00000446996 DZIP1LQ8IYY4 767 aaKnown RBP27.65■■■□□ 2.02
APOE-204ENST00000446996 SUCLG2Q96I99 432 aa27.65■■■□□ 2.02
APOE-204ENST00000446996 PSMD1Q99460 953 aa27.65■■■□□ 2.02
APOE-204ENST00000446996 TAOK3Q9H2K8 898 aa27.65■■■□□ 2.02
APOE-204ENST00000446996 FKBP4Q02790 459 aaKnown RBP eCLIP27.64■■■□□ 2.02
APOE-204ENST00000446996 RABL6Q3YEC7 729 aaPredicted RBP27.64■■■□□ 2.02
APOE-204ENST00000446996 ANKRD18AQ8IVF6 992 aa27.64■■■□□ 2.02
APOE-204ENST00000446996 KAZALD1Q96I82 304 aa27.64■■■□□ 2.02
APOE-204ENST00000446996 LRRC37AA6NMS7 1700 aa27.64■■■□□ 2.01
APOE-204ENST00000446996 CCDC88AQ3V6T2 1871 aa27.64■■■□□ 2.01
APOE-204ENST00000446996 EPHA10Q5JZY3 1008 aa27.63■■■□□ 2.01
APOE-204ENST00000446996 LMBR1LQ6UX01 489 aa27.63■■■□□ 2.01
APOE-204ENST00000446996 FTSJ3Q8IY81 847 aaKnown RBP27.63■■■□□ 2.01
APOE-204ENST00000446996 CLUAP1Q96AJ1 413 aa27.63■■■□□ 2.01
APOE-204ENST00000446996 CCDC85AQ96PX6 553 aaPredicted RBP27.63■■■□□ 2.01
APOE-204ENST00000446996 TNNQ9UQP3 1299 aa27.63■■■□□ 2.01
APOE-204ENST00000446996 GNAI3P08754 354 aa27.62■■■□□ 2.01
APOE-204ENST00000446996 LMNB1P20700 586 aa27.62■■■□□ 2.01
APOE-204ENST00000446996 ITGA6P23229 1130 aa27.62■■■□□ 2.01
APOE-204ENST00000446996 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.62■■■□□ 2.01
APOE-204ENST00000446996 DICER1Q9UPY3 1922 aaKnown RBP27.61■■■□□ 2.01
APOE-204ENST00000446996 ANKRD18BA2A2Z9 1011 aa27.61■■■□□ 2.01
APOE-204ENST00000446996 UBTFL1P0CB47 393 aaPredicted RBP27.61■■■□□ 2.01
APOE-204ENST00000446996 OLFM4Q6UX06 510 aa27.61■■■□□ 2.01
APOE-204ENST00000446996 TMEM57Q8N5G2 664 aa27.61■■■□□ 2.01
APOE-204ENST00000446996 ZNF784Q8NCA9 323 aaPredicted RBP27.61■■■□□ 2.01
APOE-204ENST00000446996 VPS33BQ9H267 617 aa27.61■■■□□ 2.01
APOE-204ENST00000446996 BSDC1Q9NW68 430 aaPredicted RBP27.61■■■□□ 2.01
APOE-204ENST00000446996 RASSF7Q02833 373 aa27.6■■■□□ 2.01
APOE-204ENST00000446996 IFIT5Q13325 482 aaKnown RBP27.6■■■□□ 2.01
APOE-204ENST00000446996 FAM161AQ3B820 660 aa27.6■■■□□ 2.01
APOE-204ENST00000446996 RTFDC1Q9BY42 306 aaPredicted RBP27.6■■■□□ 2.01
APOE-204ENST00000446996 IGHMBP2P38935 993 aaKnown RBP27.59■■■□□ 2.01
APOE-204ENST00000446996 MPNDQ8N594 471 aa27.59■■■□□ 2.01
APOE-204ENST00000446996 SUPT20HQ8NEM7 779 aa27.59■■■□□ 2.01
APOE-204ENST00000446996 BICC1Q9H694 974 aaKnown RBP27.59■■■□□ 2.01
APOE-204ENST00000446996 ZC3H4Q9UPT8 1303 aaKnown RBP27.59■■■□□ 2.01
APOE-204ENST00000446996 COL4A1P02462 1669 aa27.59■■■□□ 2.01
APOE-204ENST00000446996 CCDC57Q2TAC2 916 aa27.58■■■□□ 2.01
APOE-204ENST00000446996 C9orf131Q5VYM1 1079 aa27.58■■■□□ 2.01
APOE-204ENST00000446996 ANKRD44Q8N8A2 993 aa27.57■■■□□ 2
APOE-204ENST00000446996 MEIS3Q99687 375 aa27.57■■■□□ 2
APOE-204ENST00000446996 PODXL2Q9NZ53 605 aa27.57■■■□□ 2
APOE-204ENST00000446996 RLBP1P12271 317 aa27.56■■■□□ 2
APOE-204ENST00000446996 PRELPP51888 382 aa27.56■■■□□ 2
APOE-204ENST00000446996 DPP8Q6V1X1 898 aaPredicted RBP27.56■■■□□ 2
APOE-204ENST00000446996 RNF181Q9P0P0 153 aa27.56■■■□□ 2
APOE-204ENST00000446996 CHMP3Q9Y3E7 222 aa27.56■■■□□ 2
APOE-204ENST00000446996 PDE3AQ14432 1141 aa27.55■■■□□ 2
APOE-204ENST00000446996 MPHOSPH8Q99549 860 aa27.55■■■□□ 2
APOE-204ENST00000446996 IARSP41252 1262 aaKnown RBP27.53■■■□□ 2
APOE-204ENST00000446996 NSFL1CQ9UNZ2 370 aaKnown RBP27.53■■■□□ 2
APOE-204ENST00000446996 SPEF2Q9C093 1822 aa27.53■■■□□ 2
APOE-204ENST00000446996 LTBP1Q14766 1721 aa27.53■■■□□ 2
APOE-204ENST00000446996 ITPRIPQ8IWB1 547 aa27.52■■■□□ 2
APOE-204ENST00000446996 MINPP1Q9UNW1 487 aa27.52■■■□□ 2
APOE-204ENST00000446996 LRRFIP2Q9Y608 721 aaKnown RBP27.52■■■□□ 2
APOE-204ENST00000446996 XDHP47989 1333 aa27.51■■□□□ 1.99
APOE-204ENST00000446996 ZBTB7BO15156 539 aaPredicted RBP27.51■■□□□ 1.99
APOE-204ENST00000446996 GNAI2P04899 355 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms