RNA–Protein interactions for RNA: ENST00000446836.5

CCDC12-203, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-203ENST00000446836 C3orf67Q6ZVT6 689 aa13.69□□□□□ -0.22
CCDC12-203ENST00000446836 TMC4Q7Z404 712 aa13.69□□□□□ -0.22
CCDC12-203ENST00000446836 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
CCDC12-203ENST00000446836 ARFGEF1Q9Y6D6 1849 aa13.69□□□□□ -0.22
CCDC12-203ENST00000446836 BBOX1O75936 387 aa13.68□□□□□ -0.22
CCDC12-203ENST00000446836 CSF1RP07333 972 aa13.68□□□□□ -0.22
CCDC12-203ENST00000446836 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
CCDC12-203ENST00000446836 UBTFL1P0CB47 393 aaPredicted RBP13.68□□□□□ -0.22
CCDC12-203ENST00000446836 GPR162Q16538 588 aa13.68□□□□□ -0.22
CCDC12-203ENST00000446836 GRIPAP1Q4V328 841 aa13.68□□□□□ -0.22
CCDC12-203ENST00000446836 CC2D2BQ6DHV5 1058 aa13.68□□□□□ -0.22
CCDC12-203ENST00000446836 TMEM57Q8N5G2 664 aa13.68□□□□□ -0.22
CCDC12-203ENST00000446836 TTLL11Q8NHH1 800 aa13.68□□□□□ -0.22
CCDC12-203ENST00000446836 JARID2Q92833 1246 aaPredicted RBP13.68□□□□□ -0.22
CCDC12-203ENST00000446836 BCS1LQ9Y276 419 aa13.68□□□□□ -0.22
CCDC12-203ENST00000446836 GRAPQ13588 217 aa13.67□□□□□ -0.22
CCDC12-203ENST00000446836 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
CCDC12-203ENST00000446836 GRAPLQ8TC17 118 aaPredicted RBP13.67□□□□□ -0.22
CCDC12-203ENST00000446836 CDC5LQ99459 802 aaKnown RBP13.67□□□□□ -0.22
CCDC12-203ENST00000446836 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
CCDC12-203ENST00000446836 RRP1P56182 461 aaKnown RBP13.66□□□□□ -0.22
CCDC12-203ENST00000446836 FOXO4P98177 505 aa13.66□□□□□ -0.22
CCDC12-203ENST00000446836 RABL6Q3YEC7 729 aaPredicted RBP13.66□□□□□ -0.22
CCDC12-203ENST00000446836 ITPRIPQ8IWB1 547 aa13.66□□□□□ -0.22
CCDC12-203ENST00000446836 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
CCDC12-203ENST00000446836 TNNQ9UQP3 1299 aa13.66□□□□□ -0.22
CCDC12-203ENST00000446836 RLBP1P12271 317 aa13.65□□□□□ -0.22
CCDC12-203ENST00000446836 PANK1Q8TE04 598 aa13.65□□□□□ -0.22
CCDC12-203ENST00000446836 SUCLG2Q96I99 432 aa13.65□□□□□ -0.22
CCDC12-203ENST00000446836 MEIS3Q99687 375 aa13.65□□□□□ -0.22
CCDC12-203ENST00000446836 DDX19BQ9UMR2 479 aa13.65□□□□□ -0.22
CCDC12-203ENST00000446836 SLX4Q8IY92 1834 aa13.64□□□□□ -0.23
CCDC12-203ENST00000446836 CACNA1SQ13698 1873 aa13.64□□□□□ -0.23
CCDC12-203ENST00000446836 PPEF1O14829 653 aaPredicted RBP13.64□□□□□ -0.23
CCDC12-203ENST00000446836 PLIN1O60240 522 aa13.64□□□□□ -0.23
CCDC12-203ENST00000446836 GNAI2P04899 355 aa13.64□□□□□ -0.23
CCDC12-203ENST00000446836 YBX3P16989 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
CCDC12-203ENST00000446836 RPS8P62241 208 aaKnown RBP13.64□□□□□ -0.23
CCDC12-203ENST00000446836 IFIT5Q13325 482 aaKnown RBP13.64□□□□□ -0.23
CCDC12-203ENST00000446836 MVPQ14764 893 aaKnown RBP13.64□□□□□ -0.23
CCDC12-203ENST00000446836 LMBR1LQ6UX01 489 aa13.64□□□□□ -0.23
CCDC12-203ENST00000446836 C7orf43Q8WVR3 580 aa13.64□□□□□ -0.23
CCDC12-203ENST00000446836 KAZALD1Q96I82 304 aa13.64□□□□□ -0.23
CCDC12-203ENST00000446836 GREM2Q9H772 168 aa13.64□□□□□ -0.23
CCDC12-203ENST00000446836 ATP6V0A2Q9Y487 856 aa13.64□□□□□ -0.23
CCDC12-203ENST00000446836 ANKRD18BA2A2Z9 1011 aa13.63□□□□□ -0.23
CCDC12-203ENST00000446836 ZBTB7BO15156 539 aaPredicted RBP13.63□□□□□ -0.23
CCDC12-203ENST00000446836 ITGA6P23229 1130 aa13.63□□□□□ -0.23
CCDC12-203ENST00000446836 CCDC57Q2TAC2 916 aa13.63□□□□□ -0.23
CCDC12-203ENST00000446836 CCDC93Q567U6 631 aa13.63□□□□□ -0.23
CCDC12-203ENST00000446836 ANKRD18AQ8IVF6 992 aa13.63□□□□□ -0.23
CCDC12-203ENST00000446836 SP8Q8IXZ3 490 aa13.63□□□□□ -0.23
CCDC12-203ENST00000446836 RTKN2Q8IZC4 609 aa13.63□□□□□ -0.23
CCDC12-203ENST00000446836 BICC1Q9H694 974 aaKnown RBP13.63□□□□□ -0.23
CCDC12-203ENST00000446836 C21orf2O43822 256 aa13.62□□□□□ -0.23
CCDC12-203ENST00000446836 IGHMBP2P38935 993 aaKnown RBP13.62□□□□□ -0.23
CCDC12-203ENST00000446836 FAM161AQ3B820 660 aa13.62□□□□□ -0.23
CCDC12-203ENST00000446836 EPHA10Q5JZY3 1008 aa13.62□□□□□ -0.23
CCDC12-203ENST00000446836 CELF1Q92879 486 aaKnown RBP13.62□□□□□ -0.23
CCDC12-203ENST00000446836 CCDC85AQ96PX6 553 aaPredicted RBP13.62□□□□□ -0.23
CCDC12-203ENST00000446836 SEC31BQ9NQW1 1179 aa13.62□□□□□ -0.23
CCDC12-203ENST00000446836 WWC3Q9ULE0 1092 aa13.62□□□□□ -0.23
CCDC12-203ENST00000446836 CHMP3Q9Y3E7 222 aa13.62□□□□□ -0.23
CCDC12-203ENST00000446836 LRRFIP2Q9Y608 721 aaKnown RBP13.62□□□□□ -0.23
CCDC12-203ENST00000446836 MTX1Q13505 466 aa13.61□□□□□ -0.23
CCDC12-203ENST00000446836 ANKRD44Q8N8A2 993 aa13.61□□□□□ -0.23
CCDC12-203ENST00000446836 BSDC1Q9NW68 430 aaPredicted RBP13.61□□□□□ -0.23
CCDC12-203ENST00000446836 COG6Q9Y2V7 657 aa13.61□□□□□ -0.23
CCDC12-203ENST00000446836 LRRC37AA6NMS7 1700 aa13.61□□□□□ -0.23
CCDC12-203ENST00000446836 LTBP3Q9NS15 1303 aa13.61□□□□□ -0.23
CCDC12-203ENST00000446836 TAF7LQ5H9L4 462 aa13.6□□□□□ -0.23
CCDC12-203ENST00000446836 ARHGAP27Q6ZUM4 889 aa13.6□□□□□ -0.23
CCDC12-203ENST00000446836 MPHOSPH8Q99549 860 aa13.6□□□□□ -0.23
CCDC12-203ENST00000446836 GOLGB1Q14789 3259 aaKnown RBP13.6□□□□□ -0.23
CCDC12-203ENST00000446836 TAF1P21675 1872 aa13.59□□□□□ -0.23
CCDC12-203ENST00000446836 FER1L6Q2WGJ9 1857 aa13.59□□□□□ -0.23
CCDC12-203ENST00000446836 SUPT20HQ8NEM7 779 aa13.59□□□□□ -0.23
CCDC12-203ENST00000446836 PSMD1Q99460 953 aa13.59□□□□□ -0.23
CCDC12-203ENST00000446836 TAOK3Q9H2K8 898 aa13.59□□□□□ -0.23
CCDC12-203ENST00000446836 FBXO3Q9UK99 471 aa13.59□□□□□ -0.23
CCDC12-203ENST00000446836 SNED1Q8TER0 1413 aa13.58□□□□□ -0.24
CCDC12-203ENST00000446836 FKBP4Q02790 459 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC12-203ENST00000446836 AAMPQ13685 434 aa13.58□□□□□ -0.24
CCDC12-203ENST00000446836 C20orf194Q5TEA3 1177 aa13.58□□□□□ -0.24
CCDC12-203ENST00000446836 MPNDQ8N594 471 aa13.58□□□□□ -0.24
CCDC12-203ENST00000446836 ANKRD2Q9GZV1 360 aa13.58□□□□□ -0.24
CCDC12-203ENST00000446836 VPS33BQ9H267 617 aa13.58□□□□□ -0.24
CCDC12-203ENST00000446836 ZBTB40Q9NUA8 1239 aa13.58□□□□□ -0.24
CCDC12-203ENST00000446836 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
CCDC12-203ENST00000446836 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
CCDC12-203ENST00000446836 CENPBP07199 599 aaPredicted RBP13.57□□□□□ -0.24
CCDC12-203ENST00000446836 DPP8Q6V1X1 898 aaPredicted RBP13.57□□□□□ -0.24
CCDC12-203ENST00000446836 LDHAL6AQ6ZMR3 332 aa13.57□□□□□ -0.24
CCDC12-203ENST00000446836 RTFDC1Q9BY42 306 aaPredicted RBP13.57□□□□□ -0.24
CCDC12-203ENST00000446836 PODXL2Q9NZ53 605 aa13.57□□□□□ -0.24
CCDC12-203ENST00000446836 SUPT16HQ9Y5B9 1047 aaKnown RBP13.57□□□□□ -0.24
CCDC12-203ENST00000446836 NFKBIEO00221 500 aa13.56□□□□□ -0.24
CCDC12-203ENST00000446836 LMNB1P20700 586 aa13.56□□□□□ -0.24
CCDC12-203ENST00000446836 RPAP2Q8IXW5 612 aaPredicted RBP13.56□□□□□ -0.24
CCDC12-203ENST00000446836 COPRSQ9NQ92 184 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms