RNA–Protein interactions for RNA: ENST00000446273.1

TNRC6B-205, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TNRC6B, Length 4,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-205ENST00000446273 REREQ9P2R6 1566 aa9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 KDM4FA0A1W2PPD8 638 aa9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 FILIP1LQ4L180 1135 aa9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 CERS3Q8IU89 383 aa9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 CCDC83Q8IWF9 413 aa9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 GOLGA6L1Q8N7Z2 621 aa9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 RNF214Q8ND24 703 aa9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 UTP14AQ9BVJ6 771 aaKnown RBP9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 SETD1BQ9UPS6 1966 aaKnown RBP9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 C6orf229H3BNL8 230 aa9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 TRAPPC3LQ5T215 181 aa9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 TICAM2Q86XR7 235 aa9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 PRR36Q9H6K5 1346 aa9.64□□□□□ -0.87
TNRC6B-205ENST00000446273 ZSCAN22P10073 491 aaPredicted RBP9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 LDHAL6AQ6ZMR3 332 aa9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 NEK1Q96PY6 1258 aa9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 ANO10Q9NW15 660 aa9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 CCNL1Q9UK58 526 aaPredicted RBP9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 USP32Q8NFA0 1604 aa9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 ME1P48163 572 aa9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 FKBP4Q02790 459 aaKnown RBP eCLIP9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 OSBPL3Q9H4L5 887 aa9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 PRIM1P49642 420 aaKnown RBP9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 LRSAM1Q6UWE0 723 aa9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 ARHGEF25Q86VW2 580 aa9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 CRACR2BQ8N4Y2 399 aaPredicted RBP9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 SPATA31A3Q5VYP0 1347 aa9.63□□□□□ -0.87
TNRC6B-205ENST00000446273 APBA3O96018 575 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 HLA-DOAP06340 250 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 PLCG2P16885 1265 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 PDE6BP35913 854 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 SUPT20HQ8NEM7 779 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 XAGE3Q8WTP9 111 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 PYM1Q9BRP8 204 aaKnown RBP9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 CCDC8Q9H0W5 538 aaPredicted RBP9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 NCAPD2Q15021 1401 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 NF2P35240 595 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 USP5P45974 858 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 SMARCE1Q969G3 411 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 EHMT1Q9H9B1 1298 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 THRAP3Q9Y2W1 955 aaKnown RBP9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 RIMS1Q86UR5 1692 aaKnown RBP9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 TULP4Q9NRJ4 1543 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 OGFOD1Q8N543 542 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 MPHOSPH6Q99547 160 aaKnown RBP9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 USP31Q70CQ4 1352 aa9.62□□□□□ -0.87
TNRC6B-205ENST00000446273 MCMDC2Q4G0Z9 681 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 DZIP3Q86Y13 1208 aaKnown RBP9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 HOMER1Q86YM7 354 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 CARD10Q9BWT7 1032 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 TM6SF1Q9BZW5 370 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 FRMPD1Q5SYB0 1578 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 IDH1O75874 414 aaKnown RBP9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 SSH3Q8TE77 659 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 JDP2Q8WYK2 163 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 ZNF622Q969S3 477 aaKnown RBP eCLIP9.61□□□□□ -0.873e-6■■■□□ 18.6
TNRC6B-205ENST00000446273 HOOK2Q96ED9 719 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 SYCE3A1L190 88 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 POLR3DP05423 398 aaPredicted RBP9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 COPS6Q7L5N1 327 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 UBE3BQ7Z3V4 1068 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 ABCF2Q9UG63 623 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 ZNF213O14771 459 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 GJB2P29033 226 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 IQCA1Q86XH1 822 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 UNC5CLQ8IV45 518 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 TXLNBQ8N3L3 684 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 MYO3AQ8NEV4 1616 aa9.61□□□□□ -0.87
TNRC6B-205ENST00000446273 ANXA1P04083 346 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 EIF4A1P60842 406 aaKnown RBP9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 FAM196AQ6ZSG2 479 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 ZNF804AQ7Z570 1209 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 TMTC2Q8N394 836 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 METTL22Q9BUU2 404 aaPredicted RBP9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 ACBD3Q9H3P7 528 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 CABP5Q9NP86 173 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 ATP5J2-PTCD1G3V325 749 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 GNPATO15228 680 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 PLBD2Q8NHP8 589 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 STAP2Q9UGK3 403 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 NIP7Q9Y221 180 aaKnown RBP eCLIP9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 RBM8AQ9Y5S9 174 aaKnown RBP9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 SEC24BO95487 1268 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 STK3Q13188 491 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 TNIP1Q15025 636 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 NCOA7Q8NI08 942 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 C8orf76Q96K31 380 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 HELLSQ9NRZ9 838 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 SMC2O95347 1197 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 STIM1Q13586 685 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 CCDC87Q9NVE4 849 aa9.6□□□□□ -0.87
TNRC6B-205ENST00000446273 CDC42BPGQ6DT37 1551 aa9.59□□□□□ -0.87
TNRC6B-205ENST00000446273 RRP12Q5JTH9 1297 aaKnown RBP9.59□□□□□ -0.87
TNRC6B-205ENST00000446273 PDCL2Q8N4E4 241 aa9.59□□□□□ -0.87
TNRC6B-205ENST00000446273 RBM17Q96I25 401 aaKnown RBP9.59□□□□□ -0.87
TNRC6B-205ENST00000446273 NAPBQ9H115 298 aa9.59□□□□□ -0.87
TNRC6B-205ENST00000446273 ZNF219Q9P2Y4 722 aaPredicted RBP9.59□□□□□ -0.87
TNRC6B-205ENST00000446273 FBXO3Q9UK99 471 aa9.59□□□□□ -0.87
TNRC6B-205ENST00000446273 KDRP35968 1356 aa9.59□□□□□ -0.87
TNRC6B-205ENST00000446273 JCADQ9P266 1359 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms