RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ALKBH8Q96BT7 664 aaKnown RBP7.75□□□□□ -1.17
HMGB1P48-201ENST00000446155 TREHO43280 583 aa7.74□□□□□ -1.17
HMGB1P48-201ENST00000446155 SIN3BO75182 1162 aa7.74□□□□□ -1.17
HMGB1P48-201ENST00000446155 HOXD8P13378 290 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P48-201ENST00000446155 NFKB1P19838 968 aa7.74□□□□□ -1.17
HMGB1P48-201ENST00000446155 TARSP26639 723 aaKnown RBP7.74□□□□□ -1.17
HMGB1P48-201ENST00000446155 PDE3BQ13370 1112 aa7.74□□□□□ -1.17
HMGB1P48-201ENST00000446155 RAB44Q7Z6P3 723 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P48-201ENST00000446155 DMRTB1Q96MA1 342 aa7.74□□□□□ -1.17
HMGB1P48-201ENST00000446155 ELP3Q9H9T3 547 aa7.74□□□□□ -1.17
HMGB1P48-201ENST00000446155 NSFL1CQ9UNZ2 370 aaKnown RBP7.74□□□□□ -1.17
HMGB1P48-201ENST00000446155 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.74□□□□□ -1.17
HMGB1P48-201ENST00000446155 ADAMTS2O95450 1211 aa7.73□□□□□ -1.17
HMGB1P48-201ENST00000446155 MFAP1P55081 439 aaKnown RBP7.73□□□□□ -1.17
HMGB1P48-201ENST00000446155 C8orf34Q49A92 452 aa7.73□□□□□ -1.17
HMGB1P48-201ENST00000446155 NPM2Q86SE8 214 aaKnown RBP7.73□□□□□ -1.17
HMGB1P48-201ENST00000446155 SYT9Q86SS6 491 aa7.73□□□□□ -1.17
HMGB1P48-201ENST00000446155 FCHSD1Q86WN1 690 aa7.73□□□□□ -1.17
HMGB1P48-201ENST00000446155 BHMTQ93088 406 aa7.73□□□□□ -1.17
HMGB1P48-201ENST00000446155 TMEM63CQ9P1W3 806 aa7.73□□□□□ -1.17
HMGB1P48-201ENST00000446155 WIPF1O43516 503 aa7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 MMP20O60882 483 aa7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 TNFRSF21O75509 655 aa7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 SLCO4C1Q6ZQN7 724 aa7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 KRT25Q7Z3Z0 450 aa7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 NPAS4Q8IUM7 802 aa7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 OR13H1Q8NG92 308 aa7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 TNFRSF25Q93038 417 aa7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 ACDQ96AP0 544 aa7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 OXCT2Q9BYC2 517 aaPredicted RBP7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 CHRDQ9H2X0 955 aa7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 TLR7Q9NYK1 1049 aaKnown RBP7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 PRR12Q9ULL5 1215 aa7.72□□□□□ -1.17
HMGB1P48-201ENST00000446155 RARAP10276 462 aa7.71□□□□□ -1.18
HMGB1P48-201ENST00000446155 ADH6P28332 368 aa7.71□□□□□ -1.18
HMGB1P48-201ENST00000446155 SOX18P35713 384 aa7.71□□□□□ -1.18
HMGB1P48-201ENST00000446155 PCBP4P57723 403 aaKnown RBP7.71□□□□□ -1.18
HMGB1P48-201ENST00000446155 FMR1Q06787 632 aaKnown RBP eCLIP7.71□□□□□ -1.18
HMGB1P48-201ENST00000446155 ZNF438Q7Z4V0 828 aa7.71□□□□□ -1.18
HMGB1P48-201ENST00000446155 ZSCAN29Q8IWY8 852 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P48-201ENST00000446155 SNX29Q8TEQ0 813 aa7.71□□□□□ -1.18
HMGB1P48-201ENST00000446155 ABI2Q9NYB9 513 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P48-201ENST00000446155 CNTN3Q9P232 1028 aa7.71□□□□□ -1.18
HMGB1P48-201ENST00000446155 ADARB2-AS1A8MUL3 147 aa7.7□□□□□ -1.18
HMGB1P48-201ENST00000446155 LORP23490 312 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P48-201ENST00000446155 NEUROD1Q13562 356 aa7.7□□□□□ -1.18
HMGB1P48-201ENST00000446155 COL19A1Q14993 1142 aa7.7□□□□□ -1.18
HMGB1P48-201ENST00000446155 C1orf229Q6ZS94 237 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P48-201ENST00000446155 PNMA5Q96PV4 448 aa7.7□□□□□ -1.18
HMGB1P48-201ENST00000446155 FOXD3Q9UJU5 478 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P48-201ENST00000446155 GGA1Q9UJY5 639 aa7.7□□□□□ -1.18
HMGB1P48-201ENST00000446155 GDF2Q9UK05 429 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P48-201ENST00000446155 ANKRD33BA6NCL7 494 aa7.69□□□□□ -1.18
HMGB1P48-201ENST00000446155 NEURL1BA8MQ27 555 aa7.69□□□□□ -1.18
HMGB1P48-201ENST00000446155 ZBTB42B2RXF5 422 aa7.69□□□□□ -1.18
HMGB1P48-201ENST00000446155 ERCC3P19447 782 aa7.69□□□□□ -1.18
HMGB1P48-201ENST00000446155 NRLP54845 237 aa7.69□□□□□ -1.18
HMGB1P48-201ENST00000446155 DHX32Q7L7V1 743 aaKnown RBP7.69□□□□□ -1.18
HMGB1P48-201ENST00000446155 GOLGA6L1Q8N7Z2 621 aa7.69□□□□□ -1.18
HMGB1P48-201ENST00000446155 TRPM4Q8TD43 1214 aa7.69□□□□□ -1.18
HMGB1P48-201ENST00000446155 NIF3L1Q9GZT8 377 aa7.69□□□□□ -1.18
HMGB1P48-201ENST00000446155 KIF4AO95239 1232 aa7.68□□□□□ -1.18
HMGB1P48-201ENST00000446155 CYP2E1P05181 493 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P48-201ENST00000446155 EPXP11678 715 aa7.68□□□□□ -1.18
HMGB1P48-201ENST00000446155 GPLD1P80108 840 aa7.68□□□□□ -1.18
HMGB1P48-201ENST00000446155 ORC1Q13415 861 aa7.68□□□□□ -1.18
HMGB1P48-201ENST00000446155 C1orf127Q8N9H9 656 aa7.68□□□□□ -1.18
HMGB1P48-201ENST00000446155 TTC16Q8NEE8 873 aa7.68□□□□□ -1.18
HMGB1P48-201ENST00000446155 WHAMMQ8TF30 809 aa7.68□□□□□ -1.18
HMGB1P48-201ENST00000446155 LRRC4BQ9NT99 713 aa7.68□□□□□ -1.18
HMGB1P48-201ENST00000446155 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P48-201ENST00000446155 COL13A1Q5TAT6 717 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P48-201ENST00000446155 TTC39BQ5VTQ0 682 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P48-201ENST00000446155 LYPD4Q6UWN0 246 aa7.67□□□□□ -1.18
HMGB1P48-201ENST00000446155 ZFYVE28Q9HCC9 887 aa7.67□□□□□ -1.18
HMGB1P48-201ENST00000446155 DNAJB12Q9NXW2 375 aaKnown RBP7.67□□□□□ -1.18
HMGB1P48-201ENST00000446155 ELOA3CA0A087WX78 387 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 ELOA3DA6NLF2 546 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 EREGO14944 169 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 OIP5O43482 229 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 PHACTR2O75167 634 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 P4HBP07237 508 aaKnown RBP7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 PSAPP07602 524 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 CELA2BP08218 269 aaPredicted RBP7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 ADH7P40394 386 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 PLCB3Q01970 1234 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 PLAURQ03405 335 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 ENOX2Q16206 610 aaKnown RBP7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 ELOA3BQ3SY89 546 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 RGS22Q8NE09 1264 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 ELOA3Q8NG57 546 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 TMC1Q8TDI8 760 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 CSRNP1Q96S65 589 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 DNAJC25Q9H1X3 360 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 SALL4Q9UJQ4 1053 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 SLC6A14Q9UN76 642 aa7.66□□□□□ -1.18
HMGB1P48-201ENST00000446155 EIF1AYO14602 144 aaKnown RBP7.65□□□□□ -1.18
HMGB1P48-201ENST00000446155 NEFLP07196 543 aa7.65□□□□□ -1.18
HMGB1P48-201ENST00000446155 BCRP11274 1271 aa7.65□□□□□ -1.18
HMGB1P48-201ENST00000446155 USPL1Q5W0Q7 1092 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms