RNA–Protein interactions for RNA: ENST00000446008.5

UBE2D4-206, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2 BASIC

Gene UBE2D4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-206ENST00000446008 CCDC85CA6NKD9 419 aa13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 NBPF26B4DH59 902 aa13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 LMOD1P29536 600 aaPredicted RBP13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 MAP2K2P36507 400 aa13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 EPS15P42566 896 aa13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 SCNN1DP51172 638 aa13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 FMR1Q06787 632 aaKnown RBP eCLIP13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 CST9Q5W186 159 aa13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 CYP4F22Q6NT55 531 aa13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 NBPF10Q6P3W6 841 aaKnown RBP13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 NBPF15Q8N660 670 aa13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 GJA3Q9Y6H8 435 aa13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 TLL2Q9Y6L7 1015 aa13.24□□□□□ -0.29
UBE2D4-206ENST00000446008 HLFQ16534 295 aa13.23□□□□□ -0.29
UBE2D4-206ENST00000446008 CC2D1BQ5T0F9 858 aaKnown RBP13.23□□□□□ -0.29
UBE2D4-206ENST00000446008 PHACTR3Q96KR7 559 aa13.23□□□□□ -0.29
UBE2D4-206ENST00000446008 COL4A5P29400 1685 aa13.23□□□□□ -0.29
UBE2D4-206ENST00000446008 NUP98P52948 1817 aa13.23□□□□□ -0.29
UBE2D4-206ENST00000446008 NPC1L1Q9UHC9 1359 aa13.22□□□□□ -0.29
UBE2D4-206ENST00000446008 KIF7Q2M1P5 1343 aa13.22□□□□□ -0.29
UBE2D4-206ENST00000446008 CASP8AP2Q9UKL3 1982 aa13.22□□□□□ -0.29
UBE2D4-206ENST00000446008 FAM177BA6PVY3 158 aa13.22□□□□□ -0.29
UBE2D4-206ENST00000446008 GTF2E1P29083 439 aaPredicted RBP13.22□□□□□ -0.29
UBE2D4-206ENST00000446008 HOXA10P31260 410 aaPredicted RBP13.22□□□□□ -0.29
UBE2D4-206ENST00000446008 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
UBE2D4-206ENST00000446008 RIC1Q4ADV7 1423 aa13.22□□□□□ -0.29
UBE2D4-206ENST00000446008 CA12O43570 354 aa13.21□□□□□ -0.29
UBE2D4-206ENST00000446008 PAXIP1Q6ZW49 1069 aaPredicted RBP13.21□□□□□ -0.29
UBE2D4-206ENST00000446008 HHIPL1Q96JK4 782 aa13.21□□□□□ -0.29
UBE2D4-206ENST00000446008 RSPH6AQ9H0K4 717 aa13.21□□□□□ -0.29
UBE2D4-206ENST00000446008 TNRC18O15417 2968 aaPredicted RBP13.21□□□□□ -0.29
UBE2D4-206ENST00000446008 ERVV-1B6SEH8 477 aa13.2□□□□□ -0.3
UBE2D4-206ENST00000446008 TRAF5O00463 557 aa13.2□□□□□ -0.3
UBE2D4-206ENST00000446008 PRKAR2BP31323 418 aa13.2□□□□□ -0.3
UBE2D4-206ENST00000446008 SAPCD2Q86UD0 394 aa13.2□□□□□ -0.3
UBE2D4-206ENST00000446008 LARGE2Q8N3Y3 721 aa13.2□□□□□ -0.3
UBE2D4-206ENST00000446008 VPS33BQ9H267 617 aa13.2□□□□□ -0.3
UBE2D4-206ENST00000446008 ADARB2Q9NS39 739 aaKnown RBP13.2□□□□□ -0.3
UBE2D4-206ENST00000446008 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
UBE2D4-206ENST00000446008 AOC2O75106 756 aa13.19□□□□□ -0.3
UBE2D4-206ENST00000446008 GRM1Q13255 1194 aa13.19□□□□□ -0.3
UBE2D4-206ENST00000446008 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
UBE2D4-206ENST00000446008 CRAMP1Q96RY5 1269 aa13.19□□□□□ -0.3
UBE2D4-206ENST00000446008 MCOLN1Q9GZU1 580 aa13.19□□□□□ -0.3
UBE2D4-206ENST00000446008 PGAP2Q9UHJ9 254 aa13.19□□□□□ -0.3
UBE2D4-206ENST00000446008 IBTKQ9P2D0 1353 aaPredicted RBP13.19□□□□□ -0.3
UBE2D4-206ENST00000446008 HTATSF1O43719 755 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-206ENST00000446008 MCM10Q7L590 875 aa13.18□□□□□ -0.3
UBE2D4-206ENST00000446008 NUTM1Q86Y26 1132 aa13.18□□□□□ -0.3
UBE2D4-206ENST00000446008 RPGRQ92834 1020 aaKnown RBP13.18□□□□□ -0.3
UBE2D4-206ENST00000446008 GPRC5DQ9NZD1 345 aa13.18□□□□□ -0.3
UBE2D4-206ENST00000446008 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
UBE2D4-206ENST00000446008 BRPF1P55201 1214 aaPredicted RBP13.17□□□□□ -0.3
UBE2D4-206ENST00000446008 TAF7Q15545 349 aaPredicted RBP13.17□□□□□ -0.3
UBE2D4-206ENST00000446008 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
UBE2D4-206ENST00000446008 NIM1KQ8IY84 436 aa13.17□□□□□ -0.3
UBE2D4-206ENST00000446008 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
UBE2D4-206ENST00000446008 PDE4DIPQ5VU43 2346 aa13.17□□□□□ -0.3
UBE2D4-206ENST00000446008 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
UBE2D4-206ENST00000446008 MAP3K15Q6ZN16 1313 aa13.16□□□□□ -0.3
UBE2D4-206ENST00000446008 PPEF1O14829 653 aaPredicted RBP13.16□□□□□ -0.3
UBE2D4-206ENST00000446008 CELF2O95319 508 aaKnown RBP13.16□□□□□ -0.3
UBE2D4-206ENST00000446008 MFRPQ9BY79 579 aa13.16□□□□□ -0.3
UBE2D4-206ENST00000446008 PCGF6Q9BYE7 350 aa13.16□□□□□ -0.3
UBE2D4-206ENST00000446008 PPIP5K2O43314 1243 aa13.15□□□□□ -0.3
UBE2D4-206ENST00000446008 CXCL9Q07325 125 aa13.15□□□□□ -0.3
UBE2D4-206ENST00000446008 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
UBE2D4-206ENST00000446008 ZC3H15Q8WU90 426 aaKnown RBP13.15□□□□□ -0.3
UBE2D4-206ENST00000446008 CFAP53Q96M91 514 aa13.15□□□□□ -0.3
UBE2D4-206ENST00000446008 NUDCQ9Y266 331 aa13.15□□□□□ -0.3
UBE2D4-206ENST00000446008 UBN2Q6ZU65 1347 aa13.14□□□□□ -0.31
UBE2D4-206ENST00000446008 DGKZQ13574 1117 aa13.14□□□□□ -0.31
UBE2D4-206ENST00000446008 AOC3Q16853 763 aa13.14□□□□□ -0.31
UBE2D4-206ENST00000446008 SUSD4Q5VX71 490 aa13.14□□□□□ -0.31
UBE2D4-206ENST00000446008 ZNF34Q8IZ26 560 aa13.14□□□□□ -0.31
UBE2D4-206ENST00000446008 RTFDC1Q9BY42 306 aaPredicted RBP13.14□□□□□ -0.31
UBE2D4-206ENST00000446008 GLIS2Q9BZE0 524 aaPredicted RBP13.14□□□□□ -0.31
UBE2D4-206ENST00000446008 SCUBE2Q9NQ36 999 aa13.14□□□□□ -0.31
UBE2D4-206ENST00000446008 ZNRF3Q9ULT6 936 aa13.14□□□□□ -0.31
UBE2D4-206ENST00000446008 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 NTSR2O95665 410 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 NOGQ13253 232 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 TTLL7Q6ZT98 887 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 CDC37L1Q7L3B6 337 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 SLC51AQ86UW1 340 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 SUPT20HQ8NEM7 779 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 FBXO22Q8NEZ5 403 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 OTUD5Q96G74 571 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 MS4A4AQ96JQ5 239 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 CFAP44Q96MT7 982 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 TMX4Q9H1E5 349 aaPredicted RBP13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 ATP6V0A2Q9Y487 856 aa13.13□□□□□ -0.31
UBE2D4-206ENST00000446008 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
UBE2D4-206ENST00000446008 GPTP24298 496 aa13.12□□□□□ -0.31
UBE2D4-206ENST00000446008 GMPSP49915 693 aaPredicted RBP13.12□□□□□ -0.31
UBE2D4-206ENST00000446008 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
UBE2D4-206ENST00000446008 GIGYF2Q6Y7W6 1299 aaKnown RBP13.12□□□□□ -0.31
UBE2D4-206ENST00000446008 KIF6Q6ZMV9 814 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms