RNA–Protein interactions for RNA: ENST00000445998.1

UBQLN3-202, Transcript of ubiquilin 3, humanhuman

TSL 3

Gene UBQLN3, Length 817 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-202ENST00000445998 CACNA1SQ13698 1873 aa17.31■□□□□ 0.36
UBQLN3-202ENST00000445998 COL11A2P13942 1736 aaPredicted RBP17.3■□□□□ 0.36
UBQLN3-202ENST00000445998 GRIN3BO60391 1043 aa17.3■□□□□ 0.36
UBQLN3-202ENST00000445998 BBOX1O75936 387 aa17.3■□□□□ 0.36
UBQLN3-202ENST00000445998 SOGA3Q5TF21 947 aa17.3■□□□□ 0.36
UBQLN3-202ENST00000445998 TMC4Q7Z404 712 aa17.3■□□□□ 0.36
UBQLN3-202ENST00000445998 TMEM57Q8N5G2 664 aa17.3■□□□□ 0.36
UBQLN3-202ENST00000445998 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
UBQLN3-202ENST00000445998 BCS1LQ9Y276 419 aa17.3■□□□□ 0.36
UBQLN3-202ENST00000445998 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
UBQLN3-202ENST00000445998 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
UBQLN3-202ENST00000445998 TTLL11Q8NHH1 800 aa17.29■□□□□ 0.36
UBQLN3-202ENST00000445998 CSF1RP07333 972 aa17.28■□□□□ 0.36
UBQLN3-202ENST00000445998 GRIPAP1Q4V328 841 aa17.28■□□□□ 0.36
UBQLN3-202ENST00000445998 ITPRIPQ8IWB1 547 aa17.28■□□□□ 0.36
UBQLN3-202ENST00000445998 SLX4Q8IY92 1834 aa17.28■□□□□ 0.36
UBQLN3-202ENST00000445998 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
UBQLN3-202ENST00000445998 PLIN1O60240 522 aa17.27■□□□□ 0.36
UBQLN3-202ENST00000445998 FOXO4P98177 505 aa17.27■□□□□ 0.36
UBQLN3-202ENST00000445998 GRAPQ13588 217 aa17.27■□□□□ 0.36
UBQLN3-202ENST00000445998 CC2D2BQ6DHV5 1058 aa17.27■□□□□ 0.36
UBQLN3-202ENST00000445998 PRPF40BQ6NWY9 871 aaKnown RBP17.27■□□□□ 0.36
UBQLN3-202ENST00000445998 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
UBQLN3-202ENST00000445998 GRAPLQ8TC17 118 aaPredicted RBP17.27■□□□□ 0.36
UBQLN3-202ENST00000445998 CDC5LQ99459 802 aaKnown RBP17.27■□□□□ 0.36
UBQLN3-202ENST00000445998 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.36
UBQLN3-202ENST00000445998 TNNQ9UQP3 1299 aa17.27■□□□□ 0.36
UBQLN3-202ENST00000445998 SUCLG2Q96I99 432 aa17.26■□□□□ 0.35
UBQLN3-202ENST00000445998 ANKRD18BA2A2Z9 1011 aa17.25■□□□□ 0.35
UBQLN3-202ENST00000445998 RLBP1P12271 317 aa17.25■□□□□ 0.35
UBQLN3-202ENST00000445998 RRP1P56182 461 aaKnown RBP17.25■□□□□ 0.35
UBQLN3-202ENST00000445998 RPS8P62241 208 aaKnown RBP17.25■□□□□ 0.35
UBQLN3-202ENST00000445998 IFIT5Q13325 482 aaKnown RBP17.25■□□□□ 0.35
UBQLN3-202ENST00000445998 MVPQ14764 893 aaKnown RBP17.25■□□□□ 0.35
UBQLN3-202ENST00000445998 CCDC57Q2TAC2 916 aa17.25■□□□□ 0.35
UBQLN3-202ENST00000445998 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
UBQLN3-202ENST00000445998 ANKRD18AQ8IVF6 992 aa17.25■□□□□ 0.35
UBQLN3-202ENST00000445998 PANK1Q8TE04 598 aa17.25■□□□□ 0.35
UBQLN3-202ENST00000445998 CHMP3Q9Y3E7 222 aa17.25■□□□□ 0.35
UBQLN3-202ENST00000445998 TAF1P21675 1872 aa17.24■□□□□ 0.35
UBQLN3-202ENST00000445998 PPEF1O14829 653 aaPredicted RBP17.24■□□□□ 0.35
UBQLN3-202ENST00000445998 ZBTB7BO15156 539 aaPredicted RBP17.24■□□□□ 0.35
UBQLN3-202ENST00000445998 GNAI2P04899 355 aa17.24■□□□□ 0.35
UBQLN3-202ENST00000445998 SP8Q8IXZ3 490 aa17.24■□□□□ 0.35
UBQLN3-202ENST00000445998 MEIS3Q99687 375 aa17.24■□□□□ 0.35
UBQLN3-202ENST00000445998 C21orf2O43822 256 aa17.23■□□□□ 0.35
UBQLN3-202ENST00000445998 ITGA6P23229 1130 aa17.23■□□□□ 0.35
UBQLN3-202ENST00000445998 IGHMBP2P38935 993 aaKnown RBP17.23■□□□□ 0.35
UBQLN3-202ENST00000445998 RABL6Q3YEC7 729 aaPredicted RBP17.23■□□□□ 0.35
UBQLN3-202ENST00000445998 RTKN2Q8IZC4 609 aa17.23■□□□□ 0.35
UBQLN3-202ENST00000445998 BICC1Q9H694 974 aaKnown RBP17.23■□□□□ 0.35
UBQLN3-202ENST00000445998 GREM2Q9H772 168 aa17.23■□□□□ 0.35
UBQLN3-202ENST00000445998 WWC3Q9ULE0 1092 aa17.23■□□□□ 0.35
UBQLN3-202ENST00000445998 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.35
UBQLN3-202ENST00000445998 CCDC93Q567U6 631 aa17.22■□□□□ 0.35
UBQLN3-202ENST00000445998 TAF7LQ5H9L4 462 aa17.22■□□□□ 0.35
UBQLN3-202ENST00000445998 C7orf43Q8WVR3 580 aa17.22■□□□□ 0.35
UBQLN3-202ENST00000445998 KAZALD1Q96I82 304 aa17.22■□□□□ 0.35
UBQLN3-202ENST00000445998 CCDC85AQ96PX6 553 aaPredicted RBP17.22■□□□□ 0.35
UBQLN3-202ENST00000445998 MPHOSPH8Q99549 860 aa17.22■□□□□ 0.35
UBQLN3-202ENST00000445998 COG6Q9Y2V7 657 aa17.22■□□□□ 0.35
UBQLN3-202ENST00000445998 ATP6V0A2Q9Y487 856 aa17.22■□□□□ 0.35
UBQLN3-202ENST00000445998 EPHA10Q5JZY3 1008 aa17.21■□□□□ 0.35
UBQLN3-202ENST00000445998 ARHGAP27Q6ZUM4 889 aa17.21■□□□□ 0.35
UBQLN3-202ENST00000445998 CELF1Q92879 486 aaKnown RBP17.21■□□□□ 0.35
UBQLN3-202ENST00000445998 SEC31BQ9NQW1 1179 aa17.21■□□□□ 0.35
UBQLN3-202ENST00000445998 BSDC1Q9NW68 430 aaPredicted RBP17.21■□□□□ 0.35
UBQLN3-202ENST00000445998 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.35
UBQLN3-202ENST00000445998 CHD4Q14839 1912 aa17.2■□□□□ 0.34
UBQLN3-202ENST00000445998 FAM161AQ3B820 660 aa17.2■□□□□ 0.34
UBQLN3-202ENST00000445998 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
UBQLN3-202ENST00000445998 SUPT16HQ9Y5B9 1047 aaKnown RBP17.2■□□□□ 0.34
UBQLN3-202ENST00000445998 FER1L6Q2WGJ9 1857 aa17.2■□□□□ 0.34
UBQLN3-202ENST00000445998 CENPBP07199 599 aaPredicted RBP17.19■□□□□ 0.34
UBQLN3-202ENST00000445998 ANKRD44Q8N8A2 993 aa17.19■□□□□ 0.34
UBQLN3-202ENST00000445998 MTX1Q13505 466 aa17.18■□□□□ 0.34
UBQLN3-202ENST00000445998 C20orf194Q5TEA3 1177 aa17.18■□□□□ 0.34
UBQLN3-202ENST00000445998 SUPT20HQ8NEM7 779 aa17.18■□□□□ 0.34
UBQLN3-202ENST00000445998 SPEF2Q9C093 1822 aa17.18■□□□□ 0.34
UBQLN3-202ENST00000445998 CCDC88AQ3V6T2 1871 aa17.18■□□□□ 0.34
UBQLN3-202ENST00000445998 LTBP3Q9NS15 1303 aa17.18■□□□□ 0.34
UBQLN3-202ENST00000445998 AAMPQ13685 434 aa17.17■□□□□ 0.34
UBQLN3-202ENST00000445998 LDHAL6AQ6ZMR3 332 aa17.17■□□□□ 0.34
UBQLN3-202ENST00000445998 MPNDQ8N594 471 aa17.17■□□□□ 0.34
UBQLN3-202ENST00000445998 PSMD1Q99460 953 aa17.17■□□□□ 0.34
UBQLN3-202ENST00000445998 ANKRD2Q9GZV1 360 aa17.17■□□□□ 0.34
UBQLN3-202ENST00000445998 VPS33BQ9H267 617 aa17.17■□□□□ 0.34
UBQLN3-202ENST00000445998 FBXO3Q9UK99 471 aa17.17■□□□□ 0.34
UBQLN3-202ENST00000445998 SBF1O95248 1867 aa17.16■□□□□ 0.34
UBQLN3-202ENST00000445998 SRCAPQ6ZRS2 3230 aa17.16■□□□□ 0.34
UBQLN3-202ENST00000445998 FKBP4Q02790 459 aaKnown RBP eCLIP17.16■□□□□ 0.34
UBQLN3-202ENST00000445998 DPP8Q6V1X1 898 aaPredicted RBP17.16■□□□□ 0.34
UBQLN3-202ENST00000445998 TAOK3Q9H2K8 898 aa17.16■□□□□ 0.34
UBQLN3-202ENST00000445998 ZBTB40Q9NUA8 1239 aa17.16■□□□□ 0.34
UBQLN3-202ENST00000445998 LRRC37AA6NMS7 1700 aa17.16■□□□□ 0.34
UBQLN3-202ENST00000445998 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
UBQLN3-202ENST00000445998 ATP8B2P98198 1209 aa17.15■□□□□ 0.34
UBQLN3-202ENST00000445998 RPAP2Q8IXW5 612 aaPredicted RBP17.15■□□□□ 0.34
UBQLN3-202ENST00000445998 CNNM1Q9NRU3 951 aa17.15■□□□□ 0.34
UBQLN3-202ENST00000445998 PODXL2Q9NZ53 605 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms