RNA–Protein interactions for RNA: ENST00000445563.2

CHMP1AP1-201, Transcript of charged multivesicular body protein 1A pseudogene 1, humanhuman

BASIC

Gene CHMP1AP1, Length 662 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AP1-201ENST00000445563 ZNF219Q9P2Y4 722 aaPredicted RBP18.85■□□□□ 0.61
CHMP1AP1-201ENST00000445563 IPO8O15397 1037 aaKnown RBP18.84■□□□□ 0.61
CHMP1AP1-201ENST00000445563 PRELPP51888 382 aa18.84■□□□□ 0.61
CHMP1AP1-201ENST00000445563 FOXO4P98177 505 aa18.84■□□□□ 0.61
CHMP1AP1-201ENST00000445563 OLFM4Q6UX06 510 aa18.84■□□□□ 0.61
CHMP1AP1-201ENST00000445563 USP44Q9H0E7 712 aa18.84■□□□□ 0.61
CHMP1AP1-201ENST00000445563 RTL9Q8NET4 1388 aa18.83■□□□□ 0.61
CHMP1AP1-201ENST00000445563 LTBP3Q9NS15 1303 aa18.83■□□□□ 0.61
CHMP1AP1-201ENST00000445563 PPEF1O14829 653 aaPredicted RBP18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 NBPF7P0C2Y1 421 aaPredicted RBP18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 TRIM27P14373 513 aa18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 CCT4P50991 539 aaKnown RBP18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 CCDC152Q4G0S7 254 aa18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 CCDC93Q567U6 631 aa18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 CC2D2BQ6DHV5 1058 aa18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 ATF7IPQ6VMQ6 1270 aa18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 SLC51AQ86UW1 340 aa18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 CELF1Q92879 486 aaKnown RBP18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 TNNQ9UQP3 1299 aa18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 ATP6V0A2Q9Y487 856 aa18.83■□□□□ 0.6
CHMP1AP1-201ENST00000445563 INTS3Q68E01 1043 aaKnown RBP18.82■□□□□ 0.6
CHMP1AP1-201ENST00000445563 SP8Q8IXZ3 490 aa18.82■□□□□ 0.6
CHMP1AP1-201ENST00000445563 KAZALD1Q96I82 304 aa18.82■□□□□ 0.6
CHMP1AP1-201ENST00000445563 SEC31BQ9NQW1 1179 aa18.82■□□□□ 0.6
CHMP1AP1-201ENST00000445563 C9orf78Q9NZ63 289 aaPredicted RBP18.82■□□□□ 0.6
CHMP1AP1-201ENST00000445563 COL4A1P02462 1669 aa18.82■□□□□ 0.6
CHMP1AP1-201ENST00000445563 RASSF7Q02833 373 aa18.81■□□□□ 0.6
CHMP1AP1-201ENST00000445563 EPHA10Q5JZY3 1008 aa18.81■□□□□ 0.6
CHMP1AP1-201ENST00000445563 ZKSCAN2Q63HK3 967 aa18.81■□□□□ 0.6
CHMP1AP1-201ENST00000445563 RTKN2Q8IZC4 609 aa18.81■□□□□ 0.6
CHMP1AP1-201ENST00000445563 FRAT1Q92837 279 aaPredicted RBP18.81■□□□□ 0.6
CHMP1AP1-201ENST00000445563 YTHDC1Q96MU7 727 aaKnown RBP18.81■□□□□ 0.6
CHMP1AP1-201ENST00000445563 GREM2Q9H772 168 aa18.81■□□□□ 0.6
CHMP1AP1-201ENST00000445563 RPS8P62241 208 aaKnown RBP18.8■□□□□ 0.6
CHMP1AP1-201ENST00000445563 GRIPAP1Q4V328 841 aa18.8■□□□□ 0.6
CHMP1AP1-201ENST00000445563 TMC4Q7Z404 712 aa18.8■□□□□ 0.6
CHMP1AP1-201ENST00000445563 CCDC85AQ96PX6 553 aaPredicted RBP18.8■□□□□ 0.6
CHMP1AP1-201ENST00000445563 SUCLG2Q96I99 432 aa18.79■□□□□ 0.6
CHMP1AP1-201ENST00000445563 RCAN3Q9UKA8 241 aa18.79■□□□□ 0.6
CHMP1AP1-201ENST00000445563 FKBP4Q02790 459 aaKnown RBP eCLIP18.78■□□□□ 0.6
CHMP1AP1-201ENST00000445563 C9orf131Q5VYM1 1079 aa18.78■□□□□ 0.6
CHMP1AP1-201ENST00000445563 PSMD1Q99460 953 aa18.78■□□□□ 0.6
CHMP1AP1-201ENST00000445563 TAOK3Q9H2K8 898 aa18.78■□□□□ 0.6
CHMP1AP1-201ENST00000445563 FER1L6Q2WGJ9 1857 aa18.77■□□□□ 0.6
CHMP1AP1-201ENST00000445563 LMNB1P20700 586 aa18.77■□□□□ 0.6
CHMP1AP1-201ENST00000445563 YY1P25490 414 aa18.77■□□□□ 0.6
CHMP1AP1-201ENST00000445563 RABL6Q3YEC7 729 aaPredicted RBP18.77■□□□□ 0.6
CHMP1AP1-201ENST00000445563 LMBR1LQ6UX01 489 aa18.77■□□□□ 0.6
CHMP1AP1-201ENST00000445563 CACNA1SQ13698 1873 aa18.77■□□□□ 0.6
CHMP1AP1-201ENST00000445563 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
CHMP1AP1-201ENST00000445563 ANKRD44Q8N8A2 993 aa18.76■□□□□ 0.59
CHMP1AP1-201ENST00000445563 CLUAP1Q96AJ1 413 aa18.76■□□□□ 0.59
CHMP1AP1-201ENST00000445563 RTFDC1Q9BY42 306 aaPredicted RBP18.76■□□□□ 0.59
CHMP1AP1-201ENST00000445563 ITGA6P23229 1130 aa18.75■□□□□ 0.59
CHMP1AP1-201ENST00000445563 ANKRD18AQ8IVF6 992 aa18.75■□□□□ 0.59
CHMP1AP1-201ENST00000445563 CDC5LQ99459 802 aaKnown RBP18.75■□□□□ 0.59
CHMP1AP1-201ENST00000445563 RNF181Q9P0P0 153 aa18.75■□□□□ 0.59
CHMP1AP1-201ENST00000445563 TAF1P21675 1872 aa18.75■□□□□ 0.59
CHMP1AP1-201ENST00000445563 CHD4Q14839 1912 aa18.74■□□□□ 0.59
CHMP1AP1-201ENST00000445563 RLBP1P12271 317 aa18.74■□□□□ 0.59
CHMP1AP1-201ENST00000445563 MPNDQ8N594 471 aa18.74■□□□□ 0.59
CHMP1AP1-201ENST00000445563 TMEM57Q8N5G2 664 aa18.74■□□□□ 0.59
CHMP1AP1-201ENST00000445563 MEIS3Q99687 375 aa18.74■□□□□ 0.59
CHMP1AP1-201ENST00000445563 BICC1Q9H694 974 aaKnown RBP18.74■□□□□ 0.59
CHMP1AP1-201ENST00000445563 BSDC1Q9NW68 430 aaPredicted RBP18.74■□□□□ 0.59
CHMP1AP1-201ENST00000445563 DZIP1LQ8IYY4 767 aaKnown RBP18.73■□□□□ 0.59
CHMP1AP1-201ENST00000445563 TMX4Q9H1E5 349 aaPredicted RBP18.73■□□□□ 0.59
CHMP1AP1-201ENST00000445563 ZNF277Q9NRM2 450 aaPredicted RBP18.73■□□□□ 0.59
CHMP1AP1-201ENST00000445563 LRRC37AA6NMS7 1700 aa18.73■□□□□ 0.59
CHMP1AP1-201ENST00000445563 SBF1O95248 1867 aa18.72■□□□□ 0.59
CHMP1AP1-201ENST00000445563 ANKRD18BA2A2Z9 1011 aa18.72■□□□□ 0.59
CHMP1AP1-201ENST00000445563 GPSM2P81274 684 aa18.72■□□□□ 0.59
CHMP1AP1-201ENST00000445563 PODXL2Q9NZ53 605 aa18.72■□□□□ 0.59
CHMP1AP1-201ENST00000445563 MYH3P11055 1940 aa18.71■□□□□ 0.59
CHMP1AP1-201ENST00000445563 UBTFL1P0CB47 393 aaPredicted RBP18.71■□□□□ 0.59
CHMP1AP1-201ENST00000445563 IARSP41252 1262 aaKnown RBP18.71■□□□□ 0.59
CHMP1AP1-201ENST00000445563 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
CHMP1AP1-201ENST00000445563 DPP8Q6V1X1 898 aaPredicted RBP18.71■□□□□ 0.59
CHMP1AP1-201ENST00000445563 VPS33BQ9H267 617 aa18.71■□□□□ 0.59
CHMP1AP1-201ENST00000445563 MINPP1Q9UNW1 487 aa18.71■□□□□ 0.59
CHMP1AP1-201ENST00000445563 ZC3H4Q9UPT8 1303 aaKnown RBP18.71■□□□□ 0.59
CHMP1AP1-201ENST00000445563 GNAI3P08754 354 aa18.7■□□□□ 0.58
CHMP1AP1-201ENST00000445563 IGHMBP2P38935 993 aaKnown RBP18.7■□□□□ 0.58
CHMP1AP1-201ENST00000445563 SUPT20HQ8NEM7 779 aa18.7■□□□□ 0.58
CHMP1AP1-201ENST00000445563 DUOX1Q9NRD9 1551 aa18.7■□□□□ 0.58
CHMP1AP1-201ENST00000445563 NSFL1CQ9UNZ2 370 aaKnown RBP18.7■□□□□ 0.58
CHMP1AP1-201ENST00000445563 CCDC57Q2TAC2 916 aa18.69■□□□□ 0.58
CHMP1AP1-201ENST00000445563 POLLQ9UGP5 575 aa18.69■□□□□ 0.58
CHMP1AP1-201ENST00000445563 HDAC5Q9UQL6 1122 aa18.69■□□□□ 0.58
CHMP1AP1-201ENST00000445563 CHMP3Q9Y3E7 222 aa18.69■□□□□ 0.58
CHMP1AP1-201ENST00000445563 LRRFIP2Q9Y608 721 aaKnown RBP18.69■□□□□ 0.58
CHMP1AP1-201ENST00000445563 LTBP1Q14766 1721 aa18.69■□□□□ 0.58
CHMP1AP1-201ENST00000445563 ZBTB7BO15156 539 aaPredicted RBP18.68■□□□□ 0.58
CHMP1AP1-201ENST00000445563 PLIN1O60240 522 aa18.68■□□□□ 0.58
CHMP1AP1-201ENST00000445563 RFX5P48382 616 aaPredicted RBP18.68■□□□□ 0.58
CHMP1AP1-201ENST00000445563 FTSJ3Q8IY81 847 aaKnown RBP18.68■□□□□ 0.58
CHMP1AP1-201ENST00000445563 ZNF784Q8NCA9 323 aaPredicted RBP18.68■□□□□ 0.58
CHMP1AP1-201ENST00000445563 TBC1D16Q8TBP0 767 aa18.68■□□□□ 0.58
CHMP1AP1-201ENST00000445563 PANK1Q8TE04 598 aa18.68■□□□□ 0.58
CHMP1AP1-201ENST00000445563 ZNF594Q96JF6 807 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms