RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 GRAPLQ8TC17 118 aaPredicted RBP18.53■□□□□ 0.56
SMARCAL1-210ENST00000445153 PRDM10Q9NQV6 1147 aa18.53■□□□□ 0.56
SMARCAL1-210ENST00000445153 CTCFP49711 727 aaPredicted RBP18.52■□□□□ 0.56
SMARCAL1-210ENST00000445153 GMPSP49915 693 aaPredicted RBP18.52■□□□□ 0.56
SMARCAL1-210ENST00000445153 LBX1P52954 281 aa18.52■□□□□ 0.56
SMARCAL1-210ENST00000445153 KIAA2012Q0VF49 1180 aa18.52■□□□□ 0.56
SMARCAL1-210ENST00000445153 DDX46Q7L014 1031 aaKnown RBP18.52■□□□□ 0.56
SMARCAL1-210ENST00000445153 SUPT20HQ8NEM7 779 aa18.52■□□□□ 0.56
SMARCAL1-210ENST00000445153 FAM89AQ96GI7 184 aa18.52■□□□□ 0.56
SMARCAL1-210ENST00000445153 ISCA1Q9BUE6 129 aa18.52■□□□□ 0.56
SMARCAL1-210ENST00000445153 TMX4Q9H1E5 349 aaPredicted RBP18.52■□□□□ 0.56
SMARCAL1-210ENST00000445153 COL4A1P02462 1669 aa18.51■□□□□ 0.55
SMARCAL1-210ENST00000445153 YDJCA8MPS7 323 aa18.51■□□□□ 0.55
SMARCAL1-210ENST00000445153 ATP5J2-PTCD1G3V325 749 aa18.51■□□□□ 0.55
SMARCAL1-210ENST00000445153 RAD17O75943 681 aa18.51■□□□□ 0.55
SMARCAL1-210ENST00000445153 HIRAP54198 1017 aaPredicted RBP18.51■□□□□ 0.55
SMARCAL1-210ENST00000445153 HDGFL1Q5TGJ6 251 aa18.51■□□□□ 0.55
SMARCAL1-210ENST00000445153 ANKRD13DQ6ZTN6 518 aa18.51■□□□□ 0.55
SMARCAL1-210ENST00000445153 PLBD2Q8NHP8 589 aa18.51■□□□□ 0.55
SMARCAL1-210ENST00000445153 ADARB2Q9NS39 739 aaKnown RBP18.51■□□□□ 0.55
SMARCAL1-210ENST00000445153 SHTN1A0MZ66 631 aa18.5■□□□□ 0.55
SMARCAL1-210ENST00000445153 CIAPIN1Q6FI81 312 aa18.5■□□□□ 0.55
SMARCAL1-210ENST00000445153 CELF1Q92879 486 aaKnown RBP18.5■□□□□ 0.55
SMARCAL1-210ENST00000445153 AIDAQ96BJ3 306 aa18.5■□□□□ 0.55
SMARCAL1-210ENST00000445153 DUOX1Q9NRD9 1551 aa18.5■□□□□ 0.55
SMARCAL1-210ENST00000445153 HSPA8P11142 646 aaKnown RBP18.49■□□□□ 0.55
SMARCAL1-210ENST00000445153 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
SMARCAL1-210ENST00000445153 CYP4F22Q6NT55 531 aa18.49■□□□□ 0.55
SMARCAL1-210ENST00000445153 WDR43Q15061 677 aaKnown RBP eCLIP18.48■□□□□ 0.55
SMARCAL1-210ENST00000445153 SF3B3Q15393 1217 aaKnown RBP18.48■□□□□ 0.55
SMARCAL1-210ENST00000445153 DUSP27Q5VZP5 1158 aa18.48■□□□□ 0.55
SMARCAL1-210ENST00000445153 CAPNS2Q96L46 248 aa18.48■□□□□ 0.55
SMARCAL1-210ENST00000445153 CFAP44Q96MT7 982 aa18.48■□□□□ 0.55
SMARCAL1-210ENST00000445153 GLIS2Q9BZE0 524 aaPredicted RBP18.48■□□□□ 0.55
SMARCAL1-210ENST00000445153 MBIPQ9NS73 344 aa18.48■□□□□ 0.55
SMARCAL1-210ENST00000445153 DBF4Q9UBU7 674 aaPredicted RBP18.48■□□□□ 0.55
SMARCAL1-210ENST00000445153 PGAP2Q9UHJ9 254 aa18.48■□□□□ 0.55
SMARCAL1-210ENST00000445153 DDX60Q8IY21 1712 aaKnown RBP18.48■□□□□ 0.55
SMARCAL1-210ENST00000445153 HOXB7P09629 217 aa18.47■□□□□ 0.55
SMARCAL1-210ENST00000445153 ZNF853P0CG23 659 aa18.47■□□□□ 0.55
SMARCAL1-210ENST00000445153 TRPM4Q8TD43 1214 aa18.47■□□□□ 0.55
SMARCAL1-210ENST00000445153 TLL2Q9Y6L7 1015 aa18.47■□□□□ 0.55
SMARCAL1-210ENST00000445153 MAP2K1Q02750 393 aaPredicted RBP18.46■□□□□ 0.55
SMARCAL1-210ENST00000445153 GRM1Q13255 1194 aa18.46■□□□□ 0.55
SMARCAL1-210ENST00000445153 DLK2Q6UY11 383 aa18.46■□□□□ 0.55
SMARCAL1-210ENST00000445153 PHAXQ9H814 394 aaKnown RBP18.46■□□□□ 0.55
SMARCAL1-210ENST00000445153 KCNQ5Q9NR82 932 aa18.46■□□□□ 0.55
SMARCAL1-210ENST00000445153 ZBTB12Q9Y330 459 aaPredicted RBP18.46■□□□□ 0.55
SMARCAL1-210ENST00000445153 GPSM2P81274 684 aa18.45■□□□□ 0.54
SMARCAL1-210ENST00000445153 TNIP1Q15025 636 aa18.45■□□□□ 0.54
SMARCAL1-210ENST00000445153 PAXIP1Q6ZW49 1069 aaPredicted RBP18.45■□□□□ 0.54
SMARCAL1-210ENST00000445153 GPR101Q96P66 508 aaPredicted RBP18.45■□□□□ 0.54
SMARCAL1-210ENST00000445153 BCL2L13Q9BXK5 485 aa18.45■□□□□ 0.54
SMARCAL1-210ENST00000445153 HYPKQ9NX55 129 aa18.45■□□□□ 0.54
SMARCAL1-210ENST00000445153 POLLQ9UGP5 575 aa18.45■□□□□ 0.54
SMARCAL1-210ENST00000445153 CNOT7Q9UIV1 285 aaKnown RBP18.45■□□□□ 0.54
SMARCAL1-210ENST00000445153 NSFL1CQ9UNZ2 370 aaKnown RBP18.45■□□□□ 0.54
SMARCAL1-210ENST00000445153 TRPM7Q96QT4 1865 aa18.44■□□□□ 0.54
SMARCAL1-210ENST00000445153 LRRC37AA6NMS7 1700 aa18.44■□□□□ 0.54
SMARCAL1-210ENST00000445153 ELL2O00472 640 aaPredicted RBP18.44■□□□□ 0.54
SMARCAL1-210ENST00000445153 RIMBP2O15034 1052 aa18.44■□□□□ 0.54
SMARCAL1-210ENST00000445153 AOC2O75106 756 aa18.44■□□□□ 0.54
SMARCAL1-210ENST00000445153 CELF2O95319 508 aaKnown RBP18.44■□□□□ 0.54
SMARCAL1-210ENST00000445153 TRIM28Q13263 835 aaKnown RBP18.44■□□□□ 0.54
SMARCAL1-210ENST00000445153 WASHC4Q2M389 1173 aa18.44■□□□□ 0.54
SMARCAL1-210ENST00000445153 TMC4Q7Z404 712 aa18.44■□□□□ 0.54
SMARCAL1-210ENST00000445153 SAPCD2Q86UD0 394 aa18.44■□□□□ 0.54
SMARCAL1-210ENST00000445153 PRKRIP1Q9H875 184 aaPredicted RBP18.44■□□□□ 0.54
SMARCAL1-210ENST00000445153 PSMD14O00487 310 aa18.43■□□□□ 0.54
SMARCAL1-210ENST00000445153 IRS4O14654 1257 aaPredicted RBP18.43■□□□□ 0.54
SMARCAL1-210ENST00000445153 DBNDD1Q9H9R9 158 aa18.43■□□□□ 0.54
SMARCAL1-210ENST00000445153 CDHR2Q9BYE9 1310 aa18.43■□□□□ 0.54
SMARCAL1-210ENST00000445153 THSD7BQ9C0I4 1608 aa18.42■□□□□ 0.54
SMARCAL1-210ENST00000445153 APAF1O14727 1248 aa18.42■□□□□ 0.54
SMARCAL1-210ENST00000445153 EGFRP00533 1210 aa18.42■□□□□ 0.54
SMARCAL1-210ENST00000445153 ECE1P42892 770 aa18.42■□□□□ 0.54
SMARCAL1-210ENST00000445153 SAMD7Q7Z3H4 446 aa18.42■□□□□ 0.54
SMARCAL1-210ENST00000445153 MICALL2Q8IY33 904 aa18.42■□□□□ 0.54
SMARCAL1-210ENST00000445153 ZC3H15Q8WU90 426 aaKnown RBP18.42■□□□□ 0.54
SMARCAL1-210ENST00000445153 SEC31BQ9NQW1 1179 aa18.42■□□□□ 0.54
SMARCAL1-210ENST00000445153 RPS8P62241 208 aaKnown RBP18.41■□□□□ 0.54
SMARCAL1-210ENST00000445153 DOK7Q18PE1 504 aa18.41■□□□□ 0.54
SMARCAL1-210ENST00000445153 C8orf58Q8NAV2 365 aa18.41■□□□□ 0.54
SMARCAL1-210ENST00000445153 JARID2Q92833 1246 aaPredicted RBP18.41■□□□□ 0.54
SMARCAL1-210ENST00000445153 C6orf229H3BNL8 230 aa18.4■□□□□ 0.54
SMARCAL1-210ENST00000445153 CDC37L1Q7L3B6 337 aa18.4■□□□□ 0.54
SMARCAL1-210ENST00000445153 RIC3Q7Z5B4 369 aa18.4■□□□□ 0.54
SMARCAL1-210ENST00000445153 USP48Q86UV5 1035 aa18.4■□□□□ 0.54
SMARCAL1-210ENST00000445153 TBC1D16Q8TBP0 767 aa18.4■□□□□ 0.54
SMARCAL1-210ENST00000445153 ZNF408Q9H9D4 720 aa18.4■□□□□ 0.54
SMARCAL1-210ENST00000445153 TSKSQ9UJT2 592 aa18.4■□□□□ 0.54
SMARCAL1-210ENST00000445153 RTL9Q8NET4 1388 aa18.4■□□□□ 0.54
SMARCAL1-210ENST00000445153 H7C1D1 291 aa18.39■□□□□ 0.53
SMARCAL1-210ENST00000445153 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
SMARCAL1-210ENST00000445153 DPF2Q92785 391 aa18.39■□□□□ 0.53
SMARCAL1-210ENST00000445153 MYD88Q99836 296 aa18.39■□□□□ 0.53
SMARCAL1-210ENST00000445153 IFT57Q9NWB7 429 aa18.39■□□□□ 0.53
SMARCAL1-210ENST00000445153 ECE2O60344 883 aa18.38■□□□□ 0.53
SMARCAL1-210ENST00000445153 MAP2K2P36507 400 aa18.38■□□□□ 0.53
SMARCAL1-210ENST00000445153 TBC1D10BQ4KMP7 808 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms