RNA–Protein interactions for RNA: ENST00000444685.1

CBX1-204, Transcript of chromobox 1, humanhuman

TSL 5

Gene CBX1, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-204ENST00000444685 CA12O43570 354 aa6.96□□□□□ -1.3
CBX1-204ENST00000444685 MAP2K2P36507 400 aa6.96□□□□□ -1.3
CBX1-204ENST00000444685 SLC39A6Q13433 755 aa6.96□□□□□ -1.3
CBX1-204ENST00000444685 CCDC93Q567U6 631 aa6.96□□□□□ -1.3
CBX1-204ENST00000444685 TBC1D9BQ66K14 1250 aa6.96□□□□□ -1.3
CBX1-204ENST00000444685 MAP1SQ66K74 1059 aaPredicted RBP6.96□□□□□ -1.3
CBX1-204ENST00000444685 PRPF40BQ6NWY9 871 aaKnown RBP6.96□□□□□ -1.3
CBX1-204ENST00000444685 CAPNS2Q96L46 248 aa6.96□□□□□ -1.3
CBX1-204ENST00000444685 EMILIN3Q9NT22 766 aa6.96□□□□□ -1.3
CBX1-204ENST00000444685 TBC1D2BQ9UPU7 963 aa6.96□□□□□ -1.3
CBX1-204ENST00000444685 DPYSL4O14531 572 aa6.95□□□□□ -1.3
CBX1-204ENST00000444685 SRGNP10124 158 aa6.95□□□□□ -1.3
CBX1-204ENST00000444685 GTF2E1P29083 439 aaPredicted RBP6.95□□□□□ -1.3
CBX1-204ENST00000444685 ALDH1B1P30837 517 aa6.95□□□□□ -1.3
CBX1-204ENST00000444685 EIF5P55010 431 aaKnown RBP6.95□□□□□ -1.3
CBX1-204ENST00000444685 EIF6P56537 245 aaKnown RBP6.95□□□□□ -1.3
CBX1-204ENST00000444685 PRR5LQ6MZQ0 368 aa6.95□□□□□ -1.3
CBX1-204ENST00000444685 TPTE2Q6XPS3 522 aa6.95□□□□□ -1.3
CBX1-204ENST00000444685 MORC1Q86VD1 984 aa6.95□□□□□ -1.3
CBX1-204ENST00000444685 NBPF5PQ86XG9 351 aaPredicted RBP6.95□□□□□ -1.3
CBX1-204ENST00000444685 GPC2Q8N158 579 aa6.95□□□□□ -1.3
CBX1-204ENST00000444685 CCDC24Q8N4L8 307 aa6.95□□□□□ -1.3
CBX1-204ENST00000444685 KHSRPQ92945 711 aaKnown RBP eCLIP6.95□□□□□ -1.3
CBX1-204ENST00000444685 TMX4Q9H1E5 349 aaPredicted RBP6.95□□□□□ -1.3
CBX1-204ENST00000444685 BCL2L12Q9HB09 334 aa6.95□□□□□ -1.3
CBX1-204ENST00000444685 LGR6Q9HBX8 967 aa6.95□□□□□ -1.3
CBX1-204ENST00000444685 DDX21Q9NR30 783 aaKnown RBP eCLIP6.95□□□□□ -1.3
CBX1-204ENST00000444685 ZBTB1Q9Y2K1 713 aa6.95□□□□□ -1.3
CBX1-204ENST00000444685 COL5A3P25940 1745 aaPredicted RBP6.94□□□□□ -1.3
CBX1-204ENST00000444685 RNMTO43148 476 aaKnown RBP6.94□□□□□ -1.3
CBX1-204ENST00000444685 NPR1P16066 1061 aa6.94□□□□□ -1.3
CBX1-204ENST00000444685 PTPN5P54829 565 aa6.94□□□□□ -1.3
CBX1-204ENST00000444685 FKBP4Q02790 459 aaKnown RBP eCLIP6.94□□□□□ -1.3
CBX1-204ENST00000444685 DSG2Q14126 1118 aa6.94□□□□□ -1.3
CBX1-204ENST00000444685 IL27Q8NEV9 243 aa6.94□□□□□ -1.3
CBX1-204ENST00000444685 ZNF277Q9NRM2 450 aaPredicted RBP6.94□□□□□ -1.3
CBX1-204ENST00000444685 ZNF652Q9Y2D9 606 aa6.94□□□□□ -1.3
CBX1-204ENST00000444685 GJA3Q9Y6H8 435 aa6.94□□□□□ -1.3
CBX1-204ENST00000444685 KIF20BQ96Q89 1820 aa6.94□□□□□ -1.3
CBX1-204ENST00000444685 CARMIL3Q8ND23 1372 aa6.94□□□□□ -1.3
CBX1-204ENST00000444685 SCN4AP35499 1836 aa6.93□□□□□ -1.3
CBX1-204ENST00000444685 IL6STP40189 918 aaPredicted RBP6.93□□□□□ -1.3
CBX1-204ENST00000444685 TEFQ10587 303 aa6.93□□□□□ -1.3
CBX1-204ENST00000444685 DGKZQ13574 1117 aa6.93□□□□□ -1.3
CBX1-204ENST00000444685 GRIPAP1Q4V328 841 aa6.93□□□□□ -1.3
CBX1-204ENST00000444685 AEBP1Q8IUX7 1158 aa6.93□□□□□ -1.3
CBX1-204ENST00000444685 SYNE4Q8N205 404 aa6.93□□□□□ -1.3
CBX1-204ENST00000444685 DICER1Q9UPY3 1922 aaKnown RBP6.93□□□□□ -1.3
CBX1-204ENST00000444685 FZD9O00144 591 aa6.92□□□□□ -1.3
CBX1-204ENST00000444685 HRO43593 1189 aa6.92□□□□□ -1.3
CBX1-204ENST00000444685 GFRA3O60609 400 aa6.92□□□□□ -1.3
CBX1-204ENST00000444685 IARSP41252 1262 aaKnown RBP6.92□□□□□ -1.3
CBX1-204ENST00000444685 CC2D2BQ6DHV5 1058 aa6.92□□□□□ -1.3
CBX1-204ENST00000444685 CYP4F22Q6NT55 531 aa6.92□□□□□ -1.3
CBX1-204ENST00000444685 CLEC4GQ6UXB4 293 aa6.92□□□□□ -1.3
CBX1-204ENST00000444685 USP50Q70EL3 339 aaPredicted RBP6.92□□□□□ -1.3
CBX1-204ENST00000444685 GPIHBP1Q8IV16 184 aa6.92□□□□□ -1.3
CBX1-204ENST00000444685 MCOLN1Q9GZU1 580 aa6.92□□□□□ -1.3
CBX1-204ENST00000444685 RNF123Q5XPI4 1314 aa6.92□□□□□ -1.3
CBX1-204ENST00000444685 TIAM2Q8IVF5 1701 aa6.92□□□□□ -1.3
CBX1-204ENST00000444685 AFDNP55196 1824 aaKnown RBP6.92□□□□□ -1.3
CBX1-204ENST00000444685 DZIP3Q86Y13 1208 aaKnown RBP6.91□□□□□ -1.3
CBX1-204ENST00000444685 FMNL2Q96PY5 1086 aa6.91□□□□□ -1.3
CBX1-204ENST00000444685 PANK3Q9H999 370 aa6.91□□□□□ -1.3
CBX1-204ENST00000444685 TSKSQ9UJT2 592 aa6.91□□□□□ -1.3
CBX1-204ENST00000444685 KNSTRNQ9Y448 316 aa6.91□□□□□ -1.3
CBX1-204ENST00000444685 TLL2Q9Y6L7 1015 aa6.91□□□□□ -1.3
CBX1-204ENST00000444685 PDE4DIPQ5VU43 2346 aa6.91□□□□□ -1.3
CBX1-204ENST00000444685 FER1L6Q2WGJ9 1857 aa6.9□□□□□ -1.3
CBX1-204ENST00000444685 AOC2O75106 756 aa6.9□□□□□ -1.3
CBX1-204ENST00000444685 CELF2O95319 508 aaKnown RBP6.9□□□□□ -1.3
CBX1-204ENST00000444685 HMOX1P09601 288 aa6.9□□□□□ -1.3
CBX1-204ENST00000444685 IL13P35225 146 aa6.9□□□□□ -1.3
CBX1-204ENST00000444685 ZNF790Q6PG37 636 aa6.9□□□□□ -1.3
CBX1-204ENST00000444685 LARGE2Q8N3Y3 721 aa6.9□□□□□ -1.3
CBX1-204ENST00000444685 C7orf43Q8WVR3 580 aa6.9□□□□□ -1.3
CBX1-204ENST00000444685 PSMD1Q99460 953 aa6.9□□□□□ -1.3
CBX1-204ENST00000444685 ZNF541Q9H0D2 1346 aa6.9□□□□□ -1.3
CBX1-204ENST00000444685 SPDYE16A6NNV3 312 aaPredicted RBP6.89□□□□□ -1.31
CBX1-204ENST00000444685 FAM177BA6PVY3 158 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 GNAT3A8MTJ3 354 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 TRIM66O15016 1216 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 A1BGP04217 495 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 EPS15P42566 896 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 NOGQ13253 232 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 MTHFSDQ2M296 383 aaKnown RBP6.89□□□□□ -1.31
CBX1-204ENST00000444685 CST9Q5W186 159 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 MICALL2Q8IY33 904 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 NIM1KQ8IY84 436 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 TMC2Q8TDI7 906 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 RPGRQ92834 1020 aaKnown RBP6.89□□□□□ -1.31
CBX1-204ENST00000444685 ZNF496Q96IT1 587 aaPredicted RBP6.89□□□□□ -1.31
CBX1-204ENST00000444685 HHIPL1Q96JK4 782 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 NIP7Q9Y221 180 aaKnown RBP eCLIP6.89□□□□□ -1.31
CBX1-204ENST00000444685 DLEC1Q9Y238 1755 aa6.89□□□□□ -1.31
CBX1-204ENST00000444685 VIRMAQ69YN4 1812 aaKnown RBP6.89□□□□□ -1.31
CBX1-204ENST00000444685 SLX4Q8IY92 1834 aa6.88□□□□□ -1.31
CBX1-204ENST00000444685 NRXN2Q9P2S2 1712 aa6.88□□□□□ -1.31
CBX1-204ENST00000444685 KLRG2A4D1S0 409 aaPredicted RBP6.88□□□□□ -1.31
CBX1-204ENST00000444685 BTBD11A6QL63 1104 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms