RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
GARNL3-208ENST00000444677 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
GARNL3-208ENST00000444677 KIF3CO14782 793 aa17.25■□□□□ 0.35
GARNL3-208ENST00000444677 PDE8AO60658 829 aa17.25■□□□□ 0.35
GARNL3-208ENST00000444677 LINS1Q8NG48 757 aa17.25■□□□□ 0.35
GARNL3-208ENST00000444677 CDHR2Q9BYE9 1310 aa17.24■□□□□ 0.35
GARNL3-208ENST00000444677 CASP7P55210 303 aa17.24■□□□□ 0.35
GARNL3-208ENST00000444677 CC2D2BQ6DHV5 1058 aa17.24■□□□□ 0.35
GARNL3-208ENST00000444677 UBE3BQ7Z3V4 1068 aa17.24■□□□□ 0.35
GARNL3-208ENST00000444677 SP8Q8IXZ3 490 aa17.24■□□□□ 0.35
GARNL3-208ENST00000444677 IARSP41252 1262 aaKnown RBP17.23■□□□□ 0.35
GARNL3-208ENST00000444677 SLC4A10Q6U841 1118 aa17.23■□□□□ 0.35
GARNL3-208ENST00000444677 PSMD1Q99460 953 aa17.23■□□□□ 0.35
GARNL3-208ENST00000444677 RRAGCQ9HB90 399 aa17.23■□□□□ 0.35
GARNL3-208ENST00000444677 COL4A1P02462 1669 aa17.23■□□□□ 0.35
GARNL3-208ENST00000444677 GLTPD2A6NH11 291 aa17.22■□□□□ 0.35
GARNL3-208ENST00000444677 TTLL11Q8NHH1 800 aa17.22■□□□□ 0.35
GARNL3-208ENST00000444677 CTSWP56202 376 aa17.21■□□□□ 0.35
GARNL3-208ENST00000444677 RPS8P62241 208 aaKnown RBP17.21■□□□□ 0.35
GARNL3-208ENST00000444677 CCDC152Q4G0S7 254 aa17.21■□□□□ 0.35
GARNL3-208ENST00000444677 DDNO94850 711 aaPredicted RBP17.2■□□□□ 0.34
GARNL3-208ENST00000444677 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
GARNL3-208ENST00000444677 MPNDQ8N594 471 aa17.2■□□□□ 0.34
GARNL3-208ENST00000444677 GREM2Q9H772 168 aa17.2■□□□□ 0.34
GARNL3-208ENST00000444677 SMC4Q9NTJ3 1288 aa17.2■□□□□ 0.34
GARNL3-208ENST00000444677 LAMB2P55268 1798 aa17.2■□□□□ 0.34
GARNL3-208ENST00000444677 ZC3H4Q9UPT8 1303 aaKnown RBP17.2■□□□□ 0.34
GARNL3-208ENST00000444677 POTECB2RU33 542 aa17.19■□□□□ 0.34
GARNL3-208ENST00000444677 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
GARNL3-208ENST00000444677 GPSM2P81274 684 aa17.19■□□□□ 0.34
GARNL3-208ENST00000444677 AOC3Q16853 763 aa17.19■□□□□ 0.34
GARNL3-208ENST00000444677 DPP8Q6V1X1 898 aaPredicted RBP17.19■□□□□ 0.34
GARNL3-208ENST00000444677 SRCIN1Q9C0H9 1055 aa17.19■□□□□ 0.34
GARNL3-208ENST00000444677 TMX4Q9H1E5 349 aaPredicted RBP17.19■□□□□ 0.34
GARNL3-208ENST00000444677 KDM2BQ8NHM5 1336 aa17.19■□□□□ 0.34
GARNL3-208ENST00000444677 ZNF541Q9H0D2 1346 aa17.19■□□□□ 0.34
GARNL3-208ENST00000444677 RARSP54136 660 aaKnown RBP17.18■□□□□ 0.34
GARNL3-208ENST00000444677 EPHA10Q5JZY3 1008 aa17.18■□□□□ 0.34
GARNL3-208ENST00000444677 LARGE2Q8N3Y3 721 aa17.18■□□□□ 0.34
GARNL3-208ENST00000444677 GPR101Q96P66 508 aaPredicted RBP17.18■□□□□ 0.34
GARNL3-208ENST00000444677 PLA2G12BQ9BX93 195 aa17.18■□□□□ 0.34
GARNL3-208ENST00000444677 RTFDC1Q9BY42 306 aaPredicted RBP17.18■□□□□ 0.34
GARNL3-208ENST00000444677 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
GARNL3-208ENST00000444677 WDR90Q96KV7 1748 aa17.18■□□□□ 0.34
GARNL3-208ENST00000444677 COL4A5P29400 1685 aa17.17■□□□□ 0.34
GARNL3-208ENST00000444677 FZD9O00144 591 aa17.17■□□□□ 0.34
GARNL3-208ENST00000444677 PPIP5K2O43314 1243 aa17.17■□□□□ 0.34
GARNL3-208ENST00000444677 ALDH1L1O75891 902 aa17.17■□□□□ 0.34
GARNL3-208ENST00000444677 CT47B1P0C2W7 299 aaPredicted RBP17.17■□□□□ 0.34
GARNL3-208ENST00000444677 FOXO4P98177 505 aa17.17■□□□□ 0.34
GARNL3-208ENST00000444677 GRIPAP1Q4V328 841 aa17.17■□□□□ 0.34
GARNL3-208ENST00000444677 DPY19L2Q6NUT2 758 aa17.17■□□□□ 0.34
GARNL3-208ENST00000444677 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
GARNL3-208ENST00000444677 NSFL1CQ9UNZ2 370 aaKnown RBP17.17■□□□□ 0.34
GARNL3-208ENST00000444677 GRM8O00222 908 aa17.16■□□□□ 0.34
GARNL3-208ENST00000444677 CSF1RP07333 972 aa17.16■□□□□ 0.34
GARNL3-208ENST00000444677 TMC4Q7Z404 712 aa17.16■□□□□ 0.34
GARNL3-208ENST00000444677 POLLQ9UGP5 575 aa17.16■□□□□ 0.34
GARNL3-208ENST00000444677 PTPRCP08575 1304 aa17.16■□□□□ 0.34
GARNL3-208ENST00000444677 WTIPA6NIX2 430 aaPredicted RBP17.15■□□□□ 0.34
GARNL3-208ENST00000444677 HSPA6P17066 643 aa17.15■□□□□ 0.34
GARNL3-208ENST00000444677 FAM161AQ3B820 660 aa17.15■□□□□ 0.34
GARNL3-208ENST00000444677 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
GARNL3-208ENST00000444677 JDP2Q8WYK2 163 aa17.15■□□□□ 0.34
GARNL3-208ENST00000444677 SUCLG2Q96I99 432 aa17.15■□□□□ 0.34
GARNL3-208ENST00000444677 C9orf78Q9NZ63 289 aaPredicted RBP17.15■□□□□ 0.34
GARNL3-208ENST00000444677 RIMBP2O15034 1052 aa17.14■□□□□ 0.33
GARNL3-208ENST00000444677 TOMM70O94826 608 aa17.14■□□□□ 0.33
GARNL3-208ENST00000444677 NBPF7P0C2Y1 421 aaPredicted RBP17.14■□□□□ 0.33
GARNL3-208ENST00000444677 ITGA6P23229 1130 aa17.14■□□□□ 0.33
GARNL3-208ENST00000444677 C16orf71Q8IYS4 520 aaPredicted RBP17.14■□□□□ 0.33
GARNL3-208ENST00000444677 SUPT20HQ8NEM7 779 aa17.14■□□□□ 0.33
GARNL3-208ENST00000444677 KAZALD1Q96I82 304 aa17.14■□□□□ 0.33
GARNL3-208ENST00000444677 C6orf229H3BNL8 230 aa17.13■□□□□ 0.33
GARNL3-208ENST00000444677 BCAR3O75815 825 aa17.13■□□□□ 0.33
GARNL3-208ENST00000444677 KIAA2012Q0VF49 1180 aa17.13■□□□□ 0.33
GARNL3-208ENST00000444677 LMBR1LQ6UX01 489 aa17.13■□□□□ 0.33
GARNL3-208ENST00000444677 NIM1KQ8IY84 436 aa17.13■□□□□ 0.33
GARNL3-208ENST00000444677 TBC1D16Q8TBP0 767 aa17.13■□□□□ 0.33
GARNL3-208ENST00000444677 CDC5LQ99459 802 aaKnown RBP17.13■□□□□ 0.33
GARNL3-208ENST00000444677 TNNQ9UQP3 1299 aa17.13■□□□□ 0.33
GARNL3-208ENST00000444677 VEGFAP15692 232 aaPredicted RBP17.12■□□□□ 0.33
GARNL3-208ENST00000444677 BRPF1P55201 1214 aaPredicted RBP17.12■□□□□ 0.33
GARNL3-208ENST00000444677 MINPP1Q9UNW1 487 aa17.12■□□□□ 0.33
GARNL3-208ENST00000444677 CHMP3Q9Y3E7 222 aa17.12■□□□□ 0.33
GARNL3-208ENST00000444677 GJA3Q9Y6H8 435 aa17.12■□□□□ 0.33
GARNL3-208ENST00000444677 ZBED9Q6R2W3 1325 aa17.12■□□□□ 0.33
GARNL3-208ENST00000444677 RTL9Q8NET4 1388 aa17.12■□□□□ 0.33
GARNL3-208ENST00000444677 CEP350Q5VT06 3117 aa17.11■□□□□ 0.33
GARNL3-208ENST00000444677 EIF6P56537 245 aaKnown RBP17.11■□□□□ 0.33
GARNL3-208ENST00000444677 DOK7Q18PE1 504 aa17.11■□□□□ 0.33
GARNL3-208ENST00000444677 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
GARNL3-208ENST00000444677 USP44Q9H0E7 712 aa17.11■□□□□ 0.33
GARNL3-208ENST00000444677 VPS33BQ9H267 617 aa17.11■□□□□ 0.33
GARNL3-208ENST00000444677 BSDC1Q9NW68 430 aaPredicted RBP17.11■□□□□ 0.33
GARNL3-208ENST00000444677 PODXL2Q9NZ53 605 aa17.11■□□□□ 0.33
GARNL3-208ENST00000444677 ANKIB1Q9P2G1 1089 aa17.11■□□□□ 0.33
GARNL3-208ENST00000444677 TAF1P21675 1872 aa17.1■□□□□ 0.33
GARNL3-208ENST00000444677 YDJCA8MPS7 323 aa17.1■□□□□ 0.33
GARNL3-208ENST00000444677 UFL1O94874 794 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms