RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 NEURL1BA8MQ27 555 aa23.77■■□□□ 1.4
CCDC188-202ENST00000444532 CDHR2Q9BYE9 1310 aa23.77■■□□□ 1.4
CCDC188-202ENST00000444532 TAF1P21675 1872 aa23.77■■□□□ 1.4
CCDC188-202ENST00000444532 PDE8AO60658 829 aa23.76■■□□□ 1.39
CCDC188-202ENST00000444532 IARSP41252 1262 aaKnown RBP23.76■■□□□ 1.39
CCDC188-202ENST00000444532 CWF19L2Q2TBE0 894 aaKnown RBP23.76■■□□□ 1.39
CCDC188-202ENST00000444532 TRMT2AQ8IZ69 625 aaKnown RBP23.76■■□□□ 1.39
CCDC188-202ENST00000444532 LINS1Q8NG48 757 aa23.75■■□□□ 1.39
CCDC188-202ENST00000444532 CDCA7LQ96GN5 454 aa23.75■■□□□ 1.39
CCDC188-202ENST00000444532 JARID2Q92833 1246 aaPredicted RBP23.74■■□□□ 1.39
CCDC188-202ENST00000444532 RRAGCQ9HB90 399 aa23.74■■□□□ 1.39
CCDC188-202ENST00000444532 H7C1W4 665 aa23.73■■□□□ 1.39
CCDC188-202ENST00000444532 GCKRQ14397 625 aa23.73■■□□□ 1.39
CCDC188-202ENST00000444532 CCDC152Q4G0S7 254 aa23.73■■□□□ 1.39
CCDC188-202ENST00000444532 VPS33BQ9H267 617 aa23.73■■□□□ 1.39
CCDC188-202ENST00000444532 SUPT20HQ8NEM7 779 aa23.72■■□□□ 1.39
CCDC188-202ENST00000444532 TOMM70O94826 608 aa23.71■■□□□ 1.39
CCDC188-202ENST00000444532 RPS8P62241 208 aaKnown RBP23.71■■□□□ 1.39
CCDC188-202ENST00000444532 SLC51AQ86UW1 340 aa23.71■■□□□ 1.39
CCDC188-202ENST00000444532 MPNDQ8N594 471 aa23.71■■□□□ 1.39
CCDC188-202ENST00000444532 JDP2Q8WYK2 163 aa23.71■■□□□ 1.39
CCDC188-202ENST00000444532 CELF1Q92879 486 aaKnown RBP23.71■■□□□ 1.39
CCDC188-202ENST00000444532 RTFDC1Q9BY42 306 aaPredicted RBP23.71■■□□□ 1.39
CCDC188-202ENST00000444532 MYH3P11055 1940 aa23.71■■□□□ 1.39
CCDC188-202ENST00000444532 WDR90Q96KV7 1748 aa23.7■■□□□ 1.39
CCDC188-202ENST00000444532 F6X3S4 739 aa23.7■■□□□ 1.38
CCDC188-202ENST00000444532 VEGFAP15692 232 aaPredicted RBP23.7■■□□□ 1.38
CCDC188-202ENST00000444532 DPP8Q6V1X1 898 aaPredicted RBP23.7■■□□□ 1.38
CCDC188-202ENST00000444532 UBE3BQ7Z3V4 1068 aa23.7■■□□□ 1.38
CCDC188-202ENST00000444532 C16orf71Q8IYS4 520 aaPredicted RBP23.7■■□□□ 1.38
CCDC188-202ENST00000444532 LRRC37AA6NMS7 1700 aa23.7■■□□□ 1.38
CCDC188-202ENST00000444532 FZD9O00144 591 aa23.69■■□□□ 1.38
CCDC188-202ENST00000444532 BEND3Q5T5X7 828 aa23.69■■□□□ 1.38
CCDC188-202ENST00000444532 MRPL50Q8N5N7 158 aaKnown RBP23.69■■□□□ 1.38
CCDC188-202ENST00000444532 CT47B1P0C2W7 299 aaPredicted RBP23.68■■□□□ 1.38
CCDC188-202ENST00000444532 CTSWP56202 376 aa23.68■■□□□ 1.38
CCDC188-202ENST00000444532 LARGE2Q8N3Y3 721 aa23.68■■□□□ 1.38
CCDC188-202ENST00000444532 DDNO94850 711 aaPredicted RBP23.67■■□□□ 1.38
CCDC188-202ENST00000444532 ALDH1L2Q3SY69 923 aa23.67■■□□□ 1.38
CCDC188-202ENST00000444532 TTLL11Q8NHH1 800 aa23.67■■□□□ 1.38
CCDC188-202ENST00000444532 SSH1Q8WYL5 1049 aa23.67■■□□□ 1.38
CCDC188-202ENST00000444532 PLA2G12BQ9BX93 195 aa23.67■■□□□ 1.38
CCDC188-202ENST00000444532 SEC31BQ9NQW1 1179 aa23.67■■□□□ 1.38
CCDC188-202ENST00000444532 CASP7P55210 303 aa23.66■■□□□ 1.38
CCDC188-202ENST00000444532 RBM46Q8TBY0 533 aaKnown RBP23.66■■□□□ 1.38
CCDC188-202ENST00000444532 PTPRCP08575 1304 aa23.65■■□□□ 1.38
CCDC188-202ENST00000444532 COL4A1P02462 1669 aa23.65■■□□□ 1.38
CCDC188-202ENST00000444532 POTECB2RU33 542 aa23.65■■□□□ 1.38
CCDC188-202ENST00000444532 PPIP5K2O43314 1243 aa23.65■■□□□ 1.38
CCDC188-202ENST00000444532 RTL9Q8NET4 1388 aa23.65■■□□□ 1.38
CCDC188-202ENST00000444532 ALDH1L1O75891 902 aa23.64■■□□□ 1.37
CCDC188-202ENST00000444532 NIM1KQ8IY84 436 aa23.64■■□□□ 1.37
CCDC188-202ENST00000444532 L3MBTL3Q96JM7 780 aaPredicted RBP23.64■■□□□ 1.37
CCDC188-202ENST00000444532 CCDC85AQ96PX6 553 aaPredicted RBP23.64■■□□□ 1.37
CCDC188-202ENST00000444532 NSFL1CQ9UNZ2 370 aaKnown RBP23.64■■□□□ 1.37
CCDC188-202ENST00000444532 COL4A5P29400 1685 aa23.64■■□□□ 1.37
CCDC188-202ENST00000444532 ZNF541Q9H0D2 1346 aa23.63■■□□□ 1.37
CCDC188-202ENST00000444532 EIF6P56537 245 aaKnown RBP23.63■■□□□ 1.37
CCDC188-202ENST00000444532 AOC3Q16853 763 aa23.63■■□□□ 1.37
CCDC188-202ENST00000444532 SLC4A10Q6U841 1118 aa23.63■■□□□ 1.37
CCDC188-202ENST00000444532 ANKRD18AQ8IVF6 992 aa23.63■■□□□ 1.37
CCDC188-202ENST00000444532 CDC5LQ99459 802 aaKnown RBP23.63■■□□□ 1.37
CCDC188-202ENST00000444532 SRCIN1Q9C0H9 1055 aa23.63■■□□□ 1.37
CCDC188-202ENST00000444532 KIAA2012Q0VF49 1180 aa23.62■■□□□ 1.37
CCDC188-202ENST00000444532 GPC2Q8N158 579 aa23.62■■□□□ 1.37
CCDC188-202ENST00000444532 GREM2Q9H772 168 aa23.62■■□□□ 1.37
CCDC188-202ENST00000444532 SCN4AP35499 1836 aa23.61■■□□□ 1.37
CCDC188-202ENST00000444532 IQCA1LA6NCM1 817 aa23.61■■□□□ 1.37
CCDC188-202ENST00000444532 CSF1RP07333 972 aa23.61■■□□□ 1.37
CCDC188-202ENST00000444532 GPSM2P81274 684 aa23.61■■□□□ 1.37
CCDC188-202ENST00000444532 HNRNPUQ00839 825 aaKnown RBP eCLIP23.61■■□□□ 1.37
CCDC188-202ENST00000444532 PODXL2Q9NZ53 605 aa23.61■■□□□ 1.37
CCDC188-202ENST00000444532 DUOX1Q9NRD9 1551 aa23.61■■□□□ 1.37
CCDC188-202ENST00000444532 GRM8O00222 908 aa23.6■■□□□ 1.37
CCDC188-202ENST00000444532 FSTL1Q12841 308 aa23.6■■□□□ 1.37
CCDC188-202ENST00000444532 SMC4Q9NTJ3 1288 aa23.6■■□□□ 1.37
CCDC188-202ENST00000444532 C9orf78Q9NZ63 289 aaPredicted RBP23.6■■□□□ 1.37
CCDC188-202ENST00000444532 ZNRF3Q9ULT6 936 aa23.6■■□□□ 1.37
CCDC188-202ENST00000444532 LTBP1Q14766 1721 aa23.59■■□□□ 1.37
CCDC188-202ENST00000444532 C6orf229H3BNL8 230 aa23.59■■□□□ 1.37
CCDC188-202ENST00000444532 WASHC4Q2M389 1173 aa23.59■■□□□ 1.37
CCDC188-202ENST00000444532 BCL2L13Q9BXK5 485 aa23.59■■□□□ 1.37
CCDC188-202ENST00000444532 BSDC1Q9NW68 430 aaPredicted RBP23.59■■□□□ 1.37
CCDC188-202ENST00000444532 POLLQ9UGP5 575 aa23.59■■□□□ 1.37
CCDC188-202ENST00000444532 HSPA6P17066 643 aa23.58■■□□□ 1.37
CCDC188-202ENST00000444532 SMC1BQ8NDV3 1235 aa23.58■■□□□ 1.37
CCDC188-202ENST00000444532 EYA3Q99504 573 aa23.58■■□□□ 1.37
CCDC188-202ENST00000444532 ANKIB1Q9P2G1 1089 aa23.58■■□□□ 1.37
CCDC188-202ENST00000444532 BRPF1P55201 1214 aaPredicted RBP23.57■■□□□ 1.36
CCDC188-202ENST00000444532 FOXO4P98177 505 aa23.57■■□□□ 1.36
CCDC188-202ENST00000444532 TBC1D16Q8TBP0 767 aa23.57■■□□□ 1.36
CCDC188-202ENST00000444532 ITGA6P23229 1130 aa23.56■■□□□ 1.36
CCDC188-202ENST00000444532 GJA3Q9Y6H8 435 aa23.56■■□□□ 1.36
CCDC188-202ENST00000444532 SPEF2Q9C093 1822 aa23.55■■□□□ 1.36
CCDC188-202ENST00000444532 IGHMBP2P38935 993 aaKnown RBP23.55■■□□□ 1.36
CCDC188-202ENST00000444532 HACL1Q9UJ83 578 aa23.55■■□□□ 1.36
CCDC188-202ENST00000444532 GGA1Q9UJY5 639 aa23.55■■□□□ 1.36
CCDC188-202ENST00000444532 XDHP47989 1333 aa23.55■■□□□ 1.36
CCDC188-202ENST00000444532 RARSP54136 660 aaKnown RBP23.54■■□□□ 1.36
CCDC188-202ENST00000444532 CXCL9Q07325 125 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms