RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 RTFDC1Q9BY42 306 aaPredicted RBP18.03■□□□□ 0.48
TREX1-202ENST00000444177 VPS33BQ9H267 617 aa18.03■□□□□ 0.48
TREX1-202ENST00000444177 CLEC11AQ9Y240 323 aa18.03■□□□□ 0.48
TREX1-202ENST00000444177 COL4A5P29400 1685 aa18.03■□□□□ 0.48
TREX1-202ENST00000444177 CCER2I3L3R5 266 aa18.02■□□□□ 0.48
TREX1-202ENST00000444177 AOC3Q16853 763 aa18.02■□□□□ 0.48
TREX1-202ENST00000444177 TWISTNBQ3B726 338 aaPredicted RBP18.02■□□□□ 0.48
TREX1-202ENST00000444177 DPP8Q6V1X1 898 aaPredicted RBP18.02■□□□□ 0.48
TREX1-202ENST00000444177 PNMA8AQ86V59 439 aaPredicted RBP18.02■□□□□ 0.48
TREX1-202ENST00000444177 NIM1KQ8IY84 436 aa18.02■□□□□ 0.48
TREX1-202ENST00000444177 MPNDQ8N594 471 aa18.02■□□□□ 0.48
TREX1-202ENST00000444177 SUPT20HQ8NEM7 779 aa18.02■□□□□ 0.48
TREX1-202ENST00000444177 CHMP4AQ9BY43 222 aa18.02■□□□□ 0.48
TREX1-202ENST00000444177 PCNTO95613 3336 aa18.02■□□□□ 0.48
TREX1-202ENST00000444177 ITGBL1O95965 494 aaPredicted RBP18.01■□□□□ 0.47
TREX1-202ENST00000444177 SF3B3Q15393 1217 aaKnown RBP18.01■□□□□ 0.47
TREX1-202ENST00000444177 RTL5Q5HYW3 569 aaPredicted RBP18.01■□□□□ 0.47
TREX1-202ENST00000444177 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
TREX1-202ENST00000444177 CREBZFQ9NS37 354 aa18.01■□□□□ 0.47
TREX1-202ENST00000444177 PASKQ96RG2 1323 aa18■□□□□ 0.47
TREX1-202ENST00000444177 STK31Q9BXU1 1019 aa18■□□□□ 0.47
TREX1-202ENST00000444177 IRS4O14654 1257 aaPredicted RBP17.99■□□□□ 0.47
TREX1-202ENST00000444177 LMOD1P29536 600 aaPredicted RBP17.99■□□□□ 0.47
TREX1-202ENST00000444177 EPS15P42566 896 aa17.99■□□□□ 0.47
TREX1-202ENST00000444177 TMC4Q7Z404 712 aa17.99■□□□□ 0.47
TREX1-202ENST00000444177 ZNRF3Q9ULT6 936 aa17.99■□□□□ 0.47
TREX1-202ENST00000444177 SCNN1DP51172 638 aa17.98■□□□□ 0.47
TREX1-202ENST00000444177 CNTROBQ8N137 903 aa17.98■□□□□ 0.47
TREX1-202ENST00000444177 ZBTB38Q8NAP3 1195 aaPredicted RBP17.98■□□□□ 0.47
TREX1-202ENST00000444177 CELF1Q92879 486 aaKnown RBP17.98■□□□□ 0.47
TREX1-202ENST00000444177 MYD88Q99836 296 aa17.98■□□□□ 0.47
TREX1-202ENST00000444177 MYH16Q9H6N6 1097 aa17.98■□□□□ 0.47
TREX1-202ENST00000444177 SPINK5Q9NQ38 1064 aaPredicted RBP17.98■□□□□ 0.47
TREX1-202ENST00000444177 LAMB2P55268 1798 aa17.97■□□□□ 0.47
TREX1-202ENST00000444177 DDX58O95786 925 aaKnown RBP17.97■□□□□ 0.47
TREX1-202ENST00000444177 EXOSC9Q06265 439 aaKnown RBP17.97■□□□□ 0.47
TREX1-202ENST00000444177 CXCL9Q07325 125 aa17.97■□□□□ 0.47
TREX1-202ENST00000444177 KIAA2012Q0VF49 1180 aa17.97■□□□□ 0.47
TREX1-202ENST00000444177 MAP1SQ66K74 1059 aaPredicted RBP17.97■□□□□ 0.47
TREX1-202ENST00000444177 CCDC191Q8NCU4 936 aa17.96■□□□□ 0.47
TREX1-202ENST00000444177 METTL22Q9BUU2 404 aaPredicted RBP17.96■□□□□ 0.47
TREX1-202ENST00000444177 MKRN1Q9UHC7 482 aaKnown RBP17.96■□□□□ 0.47
TREX1-202ENST00000444177 TAF1P21675 1872 aa17.96■□□□□ 0.47
TREX1-202ENST00000444177 TMEM88BA6NKF7 163 aa17.95■□□□□ 0.46
TREX1-202ENST00000444177 RPS8P62241 208 aaKnown RBP17.95■□□□□ 0.46
TREX1-202ENST00000444177 NSFL1CQ9UNZ2 370 aaKnown RBP17.95■□□□□ 0.46
TREX1-202ENST00000444177 ZNF521Q96K83 1311 aa17.95■□□□□ 0.46
TREX1-202ENST00000444177 PCCAP05165 728 aaPredicted RBP17.94■□□□□ 0.46
TREX1-202ENST00000444177 HSP90B1P14625 803 aaKnown RBP17.94■□□□□ 0.46
TREX1-202ENST00000444177 KSR2Q6VAB6 950 aa17.94■□□□□ 0.46
TREX1-202ENST00000444177 USP50Q70EL3 339 aaPredicted RBP17.94■□□□□ 0.46
TREX1-202ENST00000444177 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
TREX1-202ENST00000444177 CWC25Q9NXE8 425 aaPredicted RBP17.94■□□□□ 0.46
TREX1-202ENST00000444177 MAP3K2Q9Y2U5 619 aa17.94■□□□□ 0.46
TREX1-202ENST00000444177 DDX60Q8IY21 1712 aaKnown RBP17.94■□□□□ 0.46
TREX1-202ENST00000444177 PI4KAP2A4QPH2 592 aa17.93■□□□□ 0.46
TREX1-202ENST00000444177 RAD17O75943 681 aa17.93■□□□□ 0.46
TREX1-202ENST00000444177 SLC4A2P04920 1241 aa17.93■□□□□ 0.46
TREX1-202ENST00000444177 GPSM2P81274 684 aa17.93■□□□□ 0.46
TREX1-202ENST00000444177 TNIP1Q15025 636 aa17.93■□□□□ 0.46
TREX1-202ENST00000444177 CIAPIN1Q6FI81 312 aa17.93■□□□□ 0.46
TREX1-202ENST00000444177 PI4KAP1Q8N8J0 262 aa17.93■□□□□ 0.46
TREX1-202ENST00000444177 GPRC5DQ9NZD1 345 aa17.93■□□□□ 0.46
TREX1-202ENST00000444177 ADAMTSL1Q8N6G6 1762 aa17.93■□□□□ 0.46
TREX1-202ENST00000444177 VAMP4O75379 141 aa17.92■□□□□ 0.46
TREX1-202ENST00000444177 GMPSP49915 693 aaPredicted RBP17.92■□□□□ 0.46
TREX1-202ENST00000444177 WASHC4Q2M389 1173 aa17.92■□□□□ 0.46
TREX1-202ENST00000444177 SEC31BQ9NQW1 1179 aa17.92■□□□□ 0.46
TREX1-202ENST00000444177 POLLQ9UGP5 575 aa17.92■□□□□ 0.46
TREX1-202ENST00000444177 LTBP1Q14766 1721 aa17.92■□□□□ 0.46
TREX1-202ENST00000444177 YDJCA8MPS7 323 aa17.91■□□□□ 0.46
TREX1-202ENST00000444177 C6orf229H3BNL8 230 aa17.91■□□□□ 0.46
TREX1-202ENST00000444177 PDE8AO60658 829 aa17.91■□□□□ 0.46
TREX1-202ENST00000444177 HSPA1AP0DMV8 641 aaKnown RBP17.91■□□□□ 0.46
TREX1-202ENST00000444177 HSPA1BP0DMV9 641 aaKnown RBP17.91■□□□□ 0.46
TREX1-202ENST00000444177 G2E3Q7L622 706 aa17.91■□□□□ 0.46
TREX1-202ENST00000444177 MIER1Q8N108 512 aa17.91■□□□□ 0.46
TREX1-202ENST00000444177 ADARB2Q9NS39 739 aaKnown RBP17.91■□□□□ 0.46
TREX1-202ENST00000444177 RIMBP2O15034 1052 aa17.9■□□□□ 0.46
TREX1-202ENST00000444177 IGKV5-2P06315 115 aa17.9■□□□□ 0.46
TREX1-202ENST00000444177 FLIIQ13045 1269 aa17.9■□□□□ 0.46
TREX1-202ENST00000444177 COL13A1Q5TAT6 717 aaPredicted RBP17.9■□□□□ 0.46
TREX1-202ENST00000444177 CNTNAP1P78357 1384 aa17.9■□□□□ 0.46
TREX1-202ENST00000444177 NEXNQ0ZGT2 675 aa17.89■□□□□ 0.45
TREX1-202ENST00000444177 FKBP5Q13451 457 aaPredicted RBP17.89■□□□□ 0.45
TREX1-202ENST00000444177 CCDC152Q4G0S7 254 aa17.89■□□□□ 0.45
TREX1-202ENST00000444177 TBC1D16Q8TBP0 767 aa17.89■□□□□ 0.45
TREX1-202ENST00000444177 CCDC85AQ96PX6 553 aaPredicted RBP17.89■□□□□ 0.45
TREX1-202ENST00000444177 BCL2L13Q9BXK5 485 aa17.89■□□□□ 0.45
TREX1-202ENST00000444177 DUOX1Q9NRD9 1551 aa17.88■□□□□ 0.45
TREX1-202ENST00000444177 COL4A1P02462 1669 aa17.88■□□□□ 0.45
TREX1-202ENST00000444177 E9PSI1 815 aa17.88■□□□□ 0.45
TREX1-202ENST00000444177 VEGFBP49765 207 aa17.88■□□□□ 0.45
TREX1-202ENST00000444177 FMR1Q06787 632 aaKnown RBP eCLIP17.88■□□□□ 0.45
TREX1-202ENST00000444177 EYA3Q99504 573 aa17.88■□□□□ 0.45
TREX1-202ENST00000444177 DBNDD1Q9H9R9 158 aa17.88■□□□□ 0.45
TREX1-202ENST00000444177 DOK7Q18PE1 504 aa17.87■□□□□ 0.45
TREX1-202ENST00000444177 DEFB115Q30KQ5 88 aa17.87■□□□□ 0.45
TREX1-202ENST00000444177 PODXL2Q9NZ53 605 aa17.87■□□□□ 0.45
TREX1-202ENST00000444177 CNOT7Q9UIV1 285 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms