RNA–Protein interactions for RNA: ENST00000444118.5

CCDC197-202, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-202ENST00000444118 EIF5P55010 431 aaKnown RBP20.85■□□□□ 0.93
CCDC197-202ENST00000444118 VPS72Q15906 364 aa20.85■□□□□ 0.93
CCDC197-202ENST00000444118 LRP5O75197 1615 aa20.84■□□□□ 0.93
CCDC197-202ENST00000444118 FAM89AQ96GI7 184 aa20.84■□□□□ 0.93
CCDC197-202ENST00000444118 CCDC9Q9Y3X0 531 aaKnown RBP20.84■□□□□ 0.93
CCDC197-202ENST00000444118 PALLDQ8WX93 1383 aa20.84■□□□□ 0.93
CCDC197-202ENST00000444118 LOC102724428A0A0B4J2F2 783 aa20.84■□□□□ 0.93
CCDC197-202ENST00000444118 SIK1P57059 783 aa20.84■□□□□ 0.93
CCDC197-202ENST00000444118 INTS5Q6P9B9 1019 aaKnown RBP20.84■□□□□ 0.93
CCDC197-202ENST00000444118 DZIP3Q86Y13 1208 aaKnown RBP20.84■□□□□ 0.93
CCDC197-202ENST00000444118 KCNB2Q92953 911 aa20.84■□□□□ 0.93
CCDC197-202ENST00000444118 FSD1Q9BTV5 496 aa20.84■□□□□ 0.93
CCDC197-202ENST00000444118 SNX14Q9Y5W7 946 aa20.84■□□□□ 0.93
CCDC197-202ENST00000444118 CCDC171Q6TFL3 1326 aa20.83■□□□□ 0.93
CCDC197-202ENST00000444118 NMIQ13287 307 aaPredicted RBP20.83■□□□□ 0.93
CCDC197-202ENST00000444118 CCDC57Q2TAC2 916 aa20.83■□□□□ 0.93
CCDC197-202ENST00000444118 LRRC24Q50LG9 513 aa20.83■□□□□ 0.93
CCDC197-202ENST00000444118 ZNF772Q68DY9 489 aaPredicted RBP20.83■□□□□ 0.93
CCDC197-202ENST00000444118 ACSBG1Q96GR2 724 aa20.83■□□□□ 0.93
CCDC197-202ENST00000444118 HAUS7Q99871 368 aa20.83■□□□□ 0.93
CCDC197-202ENST00000444118 CWC22Q9HCG8 908 aaKnown RBP20.83■□□□□ 0.93
CCDC197-202ENST00000444118 CCDC87Q9NVE4 849 aa20.83■□□□□ 0.93
CCDC197-202ENST00000444118 TNPO1Q92973 898 aaKnown RBP20.82■□□□□ 0.92
CCDC197-202ENST00000444118 FAM227BQ96M60 508 aa20.82■□□□□ 0.92
CCDC197-202ENST00000444118 FOXD4L1Q9NU39 408 aa20.82■□□□□ 0.92
CCDC197-202ENST00000444118 USP21Q9UK80 565 aa20.82■□□□□ 0.92
CCDC197-202ENST00000444118 TICAM2Q86XR7 235 aa20.82■□□□□ 0.92
CCDC197-202ENST00000444118 ZNF594Q96JF6 807 aaPredicted RBP20.82■□□□□ 0.92
CCDC197-202ENST00000444118 TMX3Q96JJ7 454 aa20.82■□□□□ 0.92
CCDC197-202ENST00000444118 DDX60Q8IY21 1712 aaKnown RBP20.82■□□□□ 0.92
CCDC197-202ENST00000444118 A0A0D9SFI3 127 aa20.81■□□□□ 0.92
CCDC197-202ENST00000444118 GPTP24298 496 aa20.81■□□□□ 0.92
CCDC197-202ENST00000444118 ATP6V1AP38606 617 aa20.81■□□□□ 0.92
CCDC197-202ENST00000444118 CRKLP46109 303 aaKnown RBP20.81■□□□□ 0.92
CCDC197-202ENST00000444118 PTH1RQ03431 593 aa20.81■□□□□ 0.92
CCDC197-202ENST00000444118 CUL4AQ13619 759 aa20.81■□□□□ 0.92
CCDC197-202ENST00000444118 POTEAQ6S8J7 498 aa20.81■□□□□ 0.92
CCDC197-202ENST00000444118 ZNF34Q8IZ26 560 aa20.81■□□□□ 0.92
CCDC197-202ENST00000444118 GSE1Q14687 1217 aa20.8■□□□□ 0.92
CCDC197-202ENST00000444118 CLEC17AQ6ZS10 378 aa20.8■□□□□ 0.92
CCDC197-202ENST00000444118 RASEFQ8IZ41 740 aa20.8■□□□□ 0.92
CCDC197-202ENST00000444118 SMARCC1Q92922 1105 aaPredicted RBP20.8■□□□□ 0.92
CCDC197-202ENST00000444118 ARXQ96QS3 562 aa20.8■□□□□ 0.92
CCDC197-202ENST00000444118 UBN2Q6ZU65 1347 aa20.8■□□□□ 0.92
CCDC197-202ENST00000444118 NHSQ6T4R5 1651 aa20.8■□□□□ 0.92
CCDC197-202ENST00000444118 RIC1Q4ADV7 1423 aa20.8■□□□□ 0.92
CCDC197-202ENST00000444118 ITPK1Q13572 414 aa20.8■□□□□ 0.92
CCDC197-202ENST00000444118 MAP4K1Q92918 833 aa20.8■□□□□ 0.92
CCDC197-202ENST00000444118 PUS3Q9BZE2 481 aaKnown RBP20.8■□□□□ 0.92
CCDC197-202ENST00000444118 UPF3BQ9BZI7 483 aaKnown RBP20.8■□□□□ 0.92
CCDC197-202ENST00000444118 BTAF1O14981 1849 aa20.8■□□□□ 0.92
CCDC197-202ENST00000444118 MYH7P12883 1935 aa20.79■□□□□ 0.92
CCDC197-202ENST00000444118 DDX11L8A8MPP1 907 aa20.79■□□□□ 0.92
CCDC197-202ENST00000444118 CYP2E1P05181 493 aaPredicted RBP20.79■□□□□ 0.92
CCDC197-202ENST00000444118 NECTIN1Q15223 517 aa20.79■□□□□ 0.92
CCDC197-202ENST00000444118 FAM98CQ17RN3 349 aaKnown RBP20.79■□□□□ 0.92
CCDC197-202ENST00000444118 TBC1D2BQ9UPU7 963 aa20.79■□□□□ 0.92
CCDC197-202ENST00000444118 ATRNO75882 1429 aa20.79■□□□□ 0.92
CCDC197-202ENST00000444118 ARAP2Q8WZ64 1704 aa20.79■□□□□ 0.92
CCDC197-202ENST00000444118 A0A1B0GUL7 405 aa20.78■□□□□ 0.92
CCDC197-202ENST00000444118 CTSWP56202 376 aa20.78■□□□□ 0.92
CCDC197-202ENST00000444118 IFIT5Q13325 482 aaKnown RBP20.78■□□□□ 0.92
CCDC197-202ENST00000444118 TTLL11Q8NHH1 800 aa20.78■□□□□ 0.92
CCDC197-202ENST00000444118 EDC3Q96F86 508 aaKnown RBP20.78■□□□□ 0.92
CCDC197-202ENST00000444118 TTC14Q96N46 770 aa20.78■□□□□ 0.92
CCDC197-202ENST00000444118 NUCB2P80303 420 aa20.78■□□□□ 0.92
CCDC197-202ENST00000444118 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCDC197-202ENST00000444118 INTS4Q96HW7 963 aaKnown RBP20.78■□□□□ 0.92
CCDC197-202ENST00000444118 GBP4Q96PP9 640 aa20.78■□□□□ 0.92
CCDC197-202ENST00000444118 SYNE4Q8N205 404 aa20.77■□□□□ 0.92
CCDC197-202ENST00000444118 ZGPATQ8N5A5 531 aaKnown RBP20.77■□□□□ 0.92
CCDC197-202ENST00000444118 AK7Q96M32 723 aa20.77■□□□□ 0.92
CCDC197-202ENST00000444118 TM6SF1Q9BZW5 370 aa20.77■□□□□ 0.92
CCDC197-202ENST00000444118 CEP126Q9P2H0 1117 aa20.77■□□□□ 0.92
CCDC197-202ENST00000444118 AKAP11Q9UKA4 1901 aa20.77■□□□□ 0.92
CCDC197-202ENST00000444118 SCN7AQ01118 1682 aa20.77■□□□□ 0.91
CCDC197-202ENST00000444118 IRS4O14654 1257 aaPredicted RBP20.76■□□□□ 0.91
CCDC197-202ENST00000444118 TIMM10P62072 90 aa20.76■□□□□ 0.91
CCDC197-202ENST00000444118 KBTBD3Q8NAB2 608 aa20.76■□□□□ 0.91
CCDC197-202ENST00000444118 TRMT112Q9UI30 125 aaKnown RBP20.76■□□□□ 0.91
CCDC197-202ENST00000444118 KCNQ2O43526 872 aa20.76■□□□□ 0.91
CCDC197-202ENST00000444118 NEUROD6Q96NK8 337 aa20.76■□□□□ 0.91
CCDC197-202ENST00000444118 QTRT2Q9H974 415 aaKnown RBP20.76■□□□□ 0.91
CCDC197-202ENST00000444118 AKAP2Q9Y2D5 859 aa20.76■□□□□ 0.91
CCDC197-202ENST00000444118 RBM8AQ9Y5S9 174 aaKnown RBP20.76■□□□□ 0.91
CCDC197-202ENST00000444118 CASZ1Q86V15 1759 aa20.76■□□□□ 0.91
CCDC197-202ENST00000444118 ABCC12Q96J65 1359 aa20.75■□□□□ 0.91
CCDC197-202ENST00000444118 RPAP1Q9BWH6 1393 aaPredicted RBP20.75■□□□□ 0.91
CCDC197-202ENST00000444118 PDE8AO60658 829 aa20.75■□□□□ 0.91
CCDC197-202ENST00000444118 CAMTA2O94983 1202 aa20.75■□□□□ 0.91
CCDC197-202ENST00000444118 DNAJC2Q99543 621 aaKnown RBP20.75■□□□□ 0.91
CCDC197-202ENST00000444118 TRPC5Q9UL62 973 aaPredicted RBP20.75■□□□□ 0.91
CCDC197-202ENST00000444118 SBF2Q86WG5 1849 aa20.75■□□□□ 0.91
CCDC197-202ENST00000444118 SH3TC1Q8TE82 1336 aa20.75■□□□□ 0.91
CCDC197-202ENST00000444118 A0A0G2JS52 829 aa20.74■□□□□ 0.91
CCDC197-202ENST00000444118 ITGA6P23229 1130 aa20.74■□□□□ 0.91
CCDC197-202ENST00000444118 SSFA2P28290 1259 aa20.74■□□□□ 0.91
CCDC197-202ENST00000444118 PRPF40BQ6NWY9 871 aaKnown RBP20.74■□□□□ 0.91
CCDC197-202ENST00000444118 ZNF589Q86UQ0 364 aaPredicted RBP20.74■□□□□ 0.91
CCDC197-202ENST00000444118 GREM2Q9H772 168 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms