RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 PDE1AP54750 535 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 TTC22Q5TAA0 569 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 TBC1D9BQ66K14 1250 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 NUTM1Q86Y26 1132 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 SETDB2Q96T68 719 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 UBR3Q6ZT12 1888 aa11.69□□□□□ -0.54
SMPD4P1-203ENST00000443839 SASH1O94885 1247 aa11.68□□□□□ -0.54
SMPD4P1-203ENST00000443839 CSF1RP07333 972 aa11.68□□□□□ -0.54
SMPD4P1-203ENST00000443839 IFIT5Q13325 482 aaKnown RBP11.68□□□□□ -0.54
SMPD4P1-203ENST00000443839 TAF7LQ5H9L4 462 aa11.68□□□□□ -0.54
SMPD4P1-203ENST00000443839 TNS1Q9HBL0 1735 aaKnown RBP11.68□□□□□ -0.54
SMPD4P1-203ENST00000443839 HCLS1P14317 486 aaPredicted RBP11.68□□□□□ -0.54
SMPD4P1-203ENST00000443839 SSFA2P28290 1259 aa11.68□□□□□ -0.54
SMPD4P1-203ENST00000443839 GTF2E1P29083 439 aaPredicted RBP11.68□□□□□ -0.54
SMPD4P1-203ENST00000443839 TSHZ3Q63HK5 1081 aa11.68□□□□□ -0.54
SMPD4P1-203ENST00000443839 TTLL11Q8NHH1 800 aa11.68□□□□□ -0.54
SMPD4P1-203ENST00000443839 OSBPL3Q9H4L5 887 aa11.68□□□□□ -0.54
SMPD4P1-203ENST00000443839 IFIT2P09913 472 aaKnown RBP11.67□□□□□ -0.54
SMPD4P1-203ENST00000443839 AACSQ86V21 672 aa11.67□□□□□ -0.54
SMPD4P1-203ENST00000443839 ZNF594Q96JF6 807 aaPredicted RBP11.67□□□□□ -0.54
SMPD4P1-203ENST00000443839 GREM2Q9H772 168 aa11.67□□□□□ -0.54
SMPD4P1-203ENST00000443839 TFCP2L1Q9NZI6 479 aa11.67□□□□□ -0.54
SMPD4P1-203ENST00000443839 SALL3Q9BXA9 1300 aa11.67□□□□□ -0.54
SMPD4P1-203ENST00000443839 GSPT1P15170 499 aaKnown RBP11.66□□□□□ -0.54
SMPD4P1-203ENST00000443839 NBPF5PQ86XG9 351 aaPredicted RBP11.66□□□□□ -0.54
SMPD4P1-203ENST00000443839 GPATCH3Q96I76 525 aa11.66□□□□□ -0.54
SMPD4P1-203ENST00000443839 NYXQ9GZU5 481 aa11.66□□□□□ -0.54
SMPD4P1-203ENST00000443839 ANKRD18BA2A2Z9 1011 aa11.66□□□□□ -0.54
SMPD4P1-203ENST00000443839 EYA2O00167 538 aa11.66□□□□□ -0.54
SMPD4P1-203ENST00000443839 NPHP1O15259 732 aa11.66□□□□□ -0.54
SMPD4P1-203ENST00000443839 ITGA6P23229 1130 aa11.66□□□□□ -0.54
SMPD4P1-203ENST00000443839 STAP2Q9UGK3 403 aa11.66□□□□□ -0.54
SMPD4P1-203ENST00000443839 CIAO1O76071 339 aa11.65□□□□□ -0.54
SMPD4P1-203ENST00000443839 IL15P40933 162 aaPredicted RBP11.65□□□□□ -0.54
SMPD4P1-203ENST00000443839 TFCP2Q12800 502 aa11.65□□□□□ -0.54
SMPD4P1-203ENST00000443839 ERFEQ4G0M1 354 aa11.65□□□□□ -0.54
SMPD4P1-203ENST00000443839 AOX1Q06278 1338 aa11.65□□□□□ -0.54
SMPD4P1-203ENST00000443839 RGPD3A6NKT7 1758 aaPredicted RBP11.65□□□□□ -0.54
SMPD4P1-203ENST00000443839 RGPD4Q7Z3J3 1758 aa11.65□□□□□ -0.54
SMPD4P1-203ENST00000443839 ZNF827Q17R98 1081 aa11.65□□□□□ -0.55
SMPD4P1-203ENST00000443839 CCDC152Q4G0S7 254 aa11.65□□□□□ -0.55
SMPD4P1-203ENST00000443839 LRRC24Q50LG9 513 aa11.65□□□□□ -0.55
SMPD4P1-203ENST00000443839 TPTE2Q6XPS3 522 aa11.65□□□□□ -0.55
SMPD4P1-203ENST00000443839 ATG9AQ7Z3C6 839 aa11.65□□□□□ -0.55
SMPD4P1-203ENST00000443839 EAF2Q96CJ1 260 aaPredicted RBP11.65□□□□□ -0.55
SMPD4P1-203ENST00000443839 FBXO3Q9UK99 471 aa11.65□□□□□ -0.55
SMPD4P1-203ENST00000443839 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.65□□□□□ -0.55
SMPD4P1-203ENST00000443839 DDX60Q8IY21 1712 aaKnown RBP11.64□□□□□ -0.55
SMPD4P1-203ENST00000443839 LAMB2P55268 1798 aa11.64□□□□□ -0.55
SMPD4P1-203ENST00000443839 SF3B2Q13435 895 aaKnown RBP11.64□□□□□ -0.55
SMPD4P1-203ENST00000443839 CARMIL3Q8ND23 1372 aa11.64□□□□□ -0.55
SMPD4P1-203ENST00000443839 COL24A1Q17RW2 1714 aa11.64□□□□□ -0.55
SMPD4P1-203ENST00000443839 GYS1P13807 737 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 SDSP20132 328 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 TNNI3KQ59H18 835 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 LDHAL6AQ6ZMR3 332 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 PUS3Q9BZE2 481 aaKnown RBP11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 CCDC8Q9H0W5 538 aaPredicted RBP11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 UPF2Q9HAU5 1272 aaKnown RBP11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 ECHDC1Q9NTX5 307 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 FPGT-TNNI3KV9GXZ4 949 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 TTC41PQ6P2S7 1318 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 TRIM6-TRIM34B2RNG4 842 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 ERC2O15083 957 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 CDC45O75419 566 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 EN1Q05925 392 aaPredicted RBP11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 NFIXQ14938 502 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 CNNM1Q9NRU3 951 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 CEP126Q9P2H0 1117 aa11.63□□□□□ -0.55
SMPD4P1-203ENST00000443839 ABCC12Q96J65 1359 aa11.62□□□□□ -0.55
SMPD4P1-203ENST00000443839 GLRX3O76003 335 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-203ENST00000443839 PI4K2BQ8TCG2 481 aa11.62□□□□□ -0.55
SMPD4P1-203ENST00000443839 TLR7Q9NYK1 1049 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-203ENST00000443839 SEC24BO95487 1268 aa11.62□□□□□ -0.55
SMPD4P1-203ENST00000443839 EZH2Q15910 746 aaKnown RBP11.62□□□□□ -0.55
SMPD4P1-203ENST00000443839 CASC1Q6TDU7 716 aa11.62□□□□□ -0.55
SMPD4P1-203ENST00000443839 TBC1D9Q6ZT07 1266 aa11.62□□□□□ -0.55
SMPD4P1-203ENST00000443839 CNBD1Q8NA66 436 aa11.62□□□□□ -0.55
SMPD4P1-203ENST00000443839 FLAD1Q8NFF5 587 aa11.62□□□□□ -0.55
SMPD4P1-203ENST00000443839 RILPL2Q969X0 211 aa11.62□□□□□ -0.55
SMPD4P1-203ENST00000443839 RTL9Q8NET4 1388 aa11.61□□□□□ -0.55
SMPD4P1-203ENST00000443839 METTL24Q5JXM2 366 aa11.61□□□□□ -0.55
SMPD4P1-203ENST00000443839 SLC10A5Q5PT55 438 aa11.61□□□□□ -0.55
SMPD4P1-203ENST00000443839 NEUROD6Q96NK8 337 aa11.61□□□□□ -0.55
SMPD4P1-203ENST00000443839 NLRP3Q96P20 1036 aa11.61□□□□□ -0.55
SMPD4P1-203ENST00000443839 MPHOSPH8Q99549 860 aa11.61□□□□□ -0.55
SMPD4P1-203ENST00000443839 GPR108Q9NPR9 543 aa11.61□□□□□ -0.55
SMPD4P1-203ENST00000443839 SEC31BQ9NQW1 1179 aa11.61□□□□□ -0.55
SMPD4P1-203ENST00000443839 DBNLQ9UJU6 430 aaKnown RBP11.61□□□□□ -0.55
SMPD4P1-203ENST00000443839 BAG6P46379 1132 aa11.6□□□□□ -0.55
SMPD4P1-203ENST00000443839 ILDR1Q86SU0 546 aaPredicted RBP11.6□□□□□ -0.55
SMPD4P1-203ENST00000443839 COL23A1Q86Y22 540 aaPredicted RBP11.6□□□□□ -0.55
SMPD4P1-203ENST00000443839 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
SMPD4P1-203ENST00000443839 CAMKK2Q96RR4 588 aa11.6□□□□□ -0.55
SMPD4P1-203ENST00000443839 CDC5LQ99459 802 aaKnown RBP11.6□□□□□ -0.55
SMPD4P1-203ENST00000443839 AKAP2Q9Y2D5 859 aa11.6□□□□□ -0.55
SMPD4P1-203ENST00000443839 TUBGCP6Q96RT7 1819 aa11.6□□□□□ -0.55
SMPD4P1-203ENST00000443839 MAP4K4O95819 1239 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms