RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 C9orf131Q5VYM1 1079 aa15.45■□□□□ 0.06
SLC48A1-202ENST00000442892 SLC51AQ86UW1 340 aa15.45■□□□□ 0.06
SLC48A1-202ENST00000442892 ZNF526Q8TF50 670 aaPredicted RBP15.45■□□□□ 0.06
SLC48A1-202ENST00000442892 CHMP3Q9Y3E7 222 aa15.45■□□□□ 0.06
SLC48A1-202ENST00000442892 TIAM2Q8IVF5 1701 aa15.45■□□□□ 0.06
SLC48A1-202ENST00000442892 KIF16BQ96L93 1317 aa15.44■□□□□ 0.06
SLC48A1-202ENST00000442892 CDHR2Q9BYE9 1310 aa15.44■□□□□ 0.06
SLC48A1-202ENST00000442892 NFKBIEO00221 500 aa15.44■□□□□ 0.06
SLC48A1-202ENST00000442892 CTSWP56202 376 aa15.44■□□□□ 0.06
SLC48A1-202ENST00000442892 GRAPQ13588 217 aa15.44■□□□□ 0.06
SLC48A1-202ENST00000442892 GRAPLQ8TC17 118 aaPredicted RBP15.44■□□□□ 0.06
SLC48A1-202ENST00000442892 TAOK3Q9H2K8 898 aa15.44■□□□□ 0.06
SLC48A1-202ENST00000442892 H7C1W4 665 aa15.43■□□□□ 0.06
SLC48A1-202ENST00000442892 API5Q9BZZ5 524 aaKnown RBP15.43■□□□□ 0.06
SLC48A1-202ENST00000442892 SEC31BQ9NQW1 1179 aa15.43■□□□□ 0.06
SLC48A1-202ENST00000442892 DICER1Q9UPY3 1922 aaKnown RBP15.43■□□□□ 0.06
SLC48A1-202ENST00000442892 COL4A1P02462 1669 aa15.42■□□□□ 0.06
SLC48A1-202ENST00000442892 GRM8O00222 908 aa15.42■□□□□ 0.06
SLC48A1-202ENST00000442892 ALDH1L1O75891 902 aa15.42■□□□□ 0.06
SLC48A1-202ENST00000442892 LMNB1P20700 586 aa15.42■□□□□ 0.06
SLC48A1-202ENST00000442892 SF3B3Q15393 1217 aaKnown RBP15.42■□□□□ 0.06
SLC48A1-202ENST00000442892 CELF1Q92879 486 aaKnown RBP15.42■□□□□ 0.06
SLC48A1-202ENST00000442892 RTKN2Q8IZC4 609 aa15.41■□□□□ 0.06
SLC48A1-202ENST00000442892 C7orf43Q8WVR3 580 aa15.41■□□□□ 0.06
SLC48A1-202ENST00000442892 ZNF277Q9NRM2 450 aaPredicted RBP15.41■□□□□ 0.06
SLC48A1-202ENST00000442892 IPO8O15397 1037 aaKnown RBP15.4■□□□□ 0.06
SLC48A1-202ENST00000442892 BBOX1O75936 387 aa15.4■□□□□ 0.06
SLC48A1-202ENST00000442892 FKBP4Q02790 459 aaKnown RBP eCLIP15.4■□□□□ 0.06
SLC48A1-202ENST00000442892 CLUAP1Q96AJ1 413 aa15.4■□□□□ 0.06
SLC48A1-202ENST00000442892 GREM2Q9H772 168 aa15.4■□□□□ 0.06
SLC48A1-202ENST00000442892 ATP6V0A2Q9Y487 856 aa15.4■□□□□ 0.06
SLC48A1-202ENST00000442892 CCT4P50991 539 aaKnown RBP15.39■□□□□ 0.05
SLC48A1-202ENST00000442892 PRELPP51888 382 aa15.39■□□□□ 0.05
SLC48A1-202ENST00000442892 CASP7P55210 303 aa15.39■□□□□ 0.05
SLC48A1-202ENST00000442892 FAM161AQ3B820 660 aa15.39■□□□□ 0.05
SLC48A1-202ENST00000442892 DPP8Q6V1X1 898 aaPredicted RBP15.39■□□□□ 0.05
SLC48A1-202ENST00000442892 ANKRD18AQ8IVF6 992 aa15.39■□□□□ 0.05
SLC48A1-202ENST00000442892 TTLL11Q8NHH1 800 aa15.39■□□□□ 0.05
SLC48A1-202ENST00000442892 TNNQ9UQP3 1299 aa15.39■□□□□ 0.05
SLC48A1-202ENST00000442892 LRRC37AA6NMS7 1700 aa15.38■□□□□ 0.05
SLC48A1-202ENST00000442892 NBPF7P0C2Y1 421 aaPredicted RBP15.38■□□□□ 0.05
SLC48A1-202ENST00000442892 RPS8P62241 208 aaKnown RBP15.38■□□□□ 0.05
SLC48A1-202ENST00000442892 CC2D2BQ6DHV5 1058 aa15.38■□□□□ 0.05
SLC48A1-202ENST00000442892 SP8Q8IXZ3 490 aa15.38■□□□□ 0.05
SLC48A1-202ENST00000442892 MPNDQ8N594 471 aa15.38■□□□□ 0.05
SLC48A1-202ENST00000442892 ZNF784Q8NCA9 323 aaPredicted RBP15.38■□□□□ 0.05
SLC48A1-202ENST00000442892 CDC5LQ99459 802 aaKnown RBP15.38■□□□□ 0.05
SLC48A1-202ENST00000442892 ITGA6P23229 1130 aa15.37■□□□□ 0.05
SLC48A1-202ENST00000442892 BRPF1P55201 1214 aaPredicted RBP15.37■□□□□ 0.05
SLC48A1-202ENST00000442892 TAF7LQ5H9L4 462 aa15.37■□□□□ 0.05
SLC48A1-202ENST00000442892 ZKSCAN2Q63HK3 967 aa15.37■□□□□ 0.05
SLC48A1-202ENST00000442892 TMC4Q7Z404 712 aa15.37■□□□□ 0.05
SLC48A1-202ENST00000442892 FTSJ3Q8IY81 847 aaKnown RBP15.37■□□□□ 0.05
SLC48A1-202ENST00000442892 SUCLG2Q96I99 432 aa15.37■□□□□ 0.05
SLC48A1-202ENST00000442892 PLA2G12BQ9BX93 195 aa15.37■□□□□ 0.05
SLC48A1-202ENST00000442892 LTBP3Q9NS15 1303 aa15.37■□□□□ 0.05
SLC48A1-202ENST00000442892 TRIM27P14373 513 aa15.36■□□□□ 0.05
SLC48A1-202ENST00000442892 IGHMBP2P38935 993 aaKnown RBP15.36■□□□□ 0.05
SLC48A1-202ENST00000442892 IARSP41252 1262 aaKnown RBP15.36■□□□□ 0.05
SLC48A1-202ENST00000442892 EPHA10Q5JZY3 1008 aa15.36■□□□□ 0.05
SLC48A1-202ENST00000442892 LMBR1LQ6UX01 489 aa15.36■□□□□ 0.05
SLC48A1-202ENST00000442892 ATF7IPQ6VMQ6 1270 aa15.36■□□□□ 0.05
SLC48A1-202ENST00000442892 ANKIB1Q9P2G1 1089 aa15.36■□□□□ 0.05
SLC48A1-202ENST00000442892 NSFL1CQ9UNZ2 370 aaKnown RBP15.36■□□□□ 0.05
SLC48A1-202ENST00000442892 ANKRD18BA2A2Z9 1011 aa15.35■□□□□ 0.05
SLC48A1-202ENST00000442892 C6orf229H3BNL8 230 aa15.35■□□□□ 0.05
SLC48A1-202ENST00000442892 PPIP5K2O43314 1243 aa15.35■□□□□ 0.05
SLC48A1-202ENST00000442892 GPSM2P81274 684 aa15.35■□□□□ 0.05
SLC48A1-202ENST00000442892 FOXO4P98177 505 aa15.35■□□□□ 0.05
SLC48A1-202ENST00000442892 IFIT5Q13325 482 aaKnown RBP15.35■□□□□ 0.05
SLC48A1-202ENST00000442892 LARGE2Q8N3Y3 721 aa15.35■□□□□ 0.05
SLC48A1-202ENST00000442892 ARHGAP45Q92619 1136 aa15.35■□□□□ 0.05
SLC48A1-202ENST00000442892 PSMD1Q99460 953 aa15.35■□□□□ 0.05
SLC48A1-202ENST00000442892 MPHOSPH8Q99549 860 aa15.35■□□□□ 0.05
SLC48A1-202ENST00000442892 GPBP1L1Q9HC44 474 aaPredicted RBP15.35■□□□□ 0.05
SLC48A1-202ENST00000442892 UBTFL1P0CB47 393 aaPredicted RBP15.34■□□□□ 0.05
SLC48A1-202ENST00000442892 AOC3Q16853 763 aa15.34■□□□□ 0.05
SLC48A1-202ENST00000442892 CCDC57Q2TAC2 916 aa15.34■□□□□ 0.05
SLC48A1-202ENST00000442892 GRIPAP1Q4V328 841 aa15.34■□□□□ 0.05
SLC48A1-202ENST00000442892 SUPT20HQ8NEM7 779 aa15.34■□□□□ 0.05
SLC48A1-202ENST00000442892 BICC1Q9H694 974 aaKnown RBP15.34■□□□□ 0.05
SLC48A1-202ENST00000442892 RCAN3Q9UKA8 241 aa15.34■□□□□ 0.05
SLC48A1-202ENST00000442892 RIMBP2O15034 1052 aa15.33■□□□□ 0.04
SLC48A1-202ENST00000442892 CSF1RP07333 972 aa15.33■□□□□ 0.04
SLC48A1-202ENST00000442892 JDP2Q8WYK2 163 aa15.33■□□□□ 0.04
SLC48A1-202ENST00000442892 GPR101Q96P66 508 aaPredicted RBP15.33■□□□□ 0.04
SLC48A1-202ENST00000442892 USP44Q9H0E7 712 aa15.33■□□□□ 0.04
SLC48A1-202ENST00000442892 RTL9Q8NET4 1388 aa15.33■□□□□ 0.04
SLC48A1-202ENST00000442892 SNED1Q8TER0 1413 aa15.33■□□□□ 0.04
SLC48A1-202ENST00000442892 DUOX1Q9NRD9 1551 aa15.32■□□□□ 0.04
SLC48A1-202ENST00000442892 UFL1O94874 794 aa15.32■□□□□ 0.04
SLC48A1-202ENST00000442892 ITPRIPQ8IWB1 547 aa15.32■□□□□ 0.04
SLC48A1-202ENST00000442892 NIM1KQ8IY84 436 aa15.32■□□□□ 0.04
SLC48A1-202ENST00000442892 TMEM57Q8N5G2 664 aa15.32■□□□□ 0.04
SLC48A1-202ENST00000442892 ZNF594Q96JF6 807 aaPredicted RBP15.32■□□□□ 0.04
SLC48A1-202ENST00000442892 MEIS3Q99687 375 aa15.32■□□□□ 0.04
SLC48A1-202ENST00000442892 UTYO14607 1347 aa15.32■□□□□ 0.04
SLC48A1-202ENST00000442892 DZIP1LQ8IYY4 767 aaKnown RBP15.31■□□□□ 0.04
SLC48A1-202ENST00000442892 CNNM1Q9NRU3 951 aa15.31■□□□□ 0.04
SLC48A1-202ENST00000442892 GGA1Q9UJY5 639 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms