RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 PPP1R42Q7Z4L9 355 aa11.25□□□□□ -0.61
NR1I3-211ENST00000442691 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
NR1I3-211ENST00000442691 C4BP0C0L5 1744 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 TAF1LQ8IZX4 1826 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 ATN1P54259 1190 aaPredicted RBP11.24□□□□□ -0.61
NR1I3-211ENST00000442691 E2F4Q16254 413 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 ANKRD45Q5TZF3 282 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 UBE3BQ7Z3V4 1068 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 NLRP10Q86W26 655 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 ZNF34Q8IZ26 560 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 LINC00116Q8NCU8 138 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 SUCLG2Q96I99 432 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 LRRCC1Q9C099 1032 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 AOX1Q06278 1338 aa11.24□□□□□ -0.61
NR1I3-211ENST00000442691 BMP2KLQ5H9B9 411 aa11.23□□□□□ -0.61
NR1I3-211ENST00000442691 KIF1BPQ96EK5 621 aa11.23□□□□□ -0.61
NR1I3-211ENST00000442691 OSBPL3Q9H4L5 887 aa11.23□□□□□ -0.61
NR1I3-211ENST00000442691 BICC1Q9H694 974 aaKnown RBP11.23□□□□□ -0.61
NR1I3-211ENST00000442691 COPRSQ9NQ92 184 aa11.23□□□□□ -0.61
NR1I3-211ENST00000442691 ATP5J2-PTCD1G3V325 749 aa11.22□□□□□ -0.61
NR1I3-211ENST00000442691 ATMINO43313 823 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-211ENST00000442691 FAM161AQ3B820 660 aa11.22□□□□□ -0.61
NR1I3-211ENST00000442691 MYH14Q7Z406 1995 aaKnown RBP11.22□□□□□ -0.61
NR1I3-211ENST00000442691 RGS17Q9UGC6 210 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-211ENST00000442691 NARFQ9UHQ1 456 aa11.22□□□□□ -0.61
NR1I3-211ENST00000442691 RTCBQ9Y3I0 505 aaKnown RBP11.22□□□□□ -0.61
NR1I3-211ENST00000442691 ZNF330Q9Y3S2 320 aaPredicted RBP11.22□□□□□ -0.61
NR1I3-211ENST00000442691 NUP98P52948 1817 aa11.21□□□□□ -0.61
NR1I3-211ENST00000442691 RTL9Q8NET4 1388 aa11.21□□□□□ -0.61
NR1I3-211ENST00000442691 SSFA2P28290 1259 aa11.21□□□□□ -0.61
NR1I3-211ENST00000442691 RGS3P49796 1198 aa11.21□□□□□ -0.61
NR1I3-211ENST00000442691 PTF1AQ7RTS3 328 aa11.21□□□□□ -0.61
NR1I3-211ENST00000442691 LNPKQ9C0E8 428 aa11.21□□□□□ -0.61
NR1I3-211ENST00000442691 CRISPLD2Q9H0B8 497 aa11.21□□□□□ -0.61
NR1I3-211ENST00000442691 KAT6BQ8WYB5 2073 aa11.21□□□□□ -0.62
NR1I3-211ENST00000442691 LAMB2P55268 1798 aa11.21□□□□□ -0.62
NR1I3-211ENST00000442691 RIC1Q4ADV7 1423 aa11.2□□□□□ -0.62
NR1I3-211ENST00000442691 SALL3Q9BXA9 1300 aa11.2□□□□□ -0.62
NR1I3-211ENST00000442691 USP42Q9H9J4 1324 aaKnown RBP11.2□□□□□ -0.62
NR1I3-211ENST00000442691 SURF6O75683 361 aaKnown RBP11.2□□□□□ -0.62
NR1I3-211ENST00000442691 CSF1RP07333 972 aa11.2□□□□□ -0.62
NR1I3-211ENST00000442691 FOXO4P98177 505 aa11.2□□□□□ -0.62
NR1I3-211ENST00000442691 HLFQ16534 295 aa11.2□□□□□ -0.62
NR1I3-211ENST00000442691 FAM182BQ5T319 152 aa11.2□□□□□ -0.62
NR1I3-211ENST00000442691 ASTLQ6HA08 431 aaPredicted RBP11.2□□□□□ -0.62
NR1I3-211ENST00000442691 ARHGEF1Q92888 912 aaKnown RBP11.2□□□□□ -0.62
NR1I3-211ENST00000442691 BACH2Q9BYV9 841 aa11.2□□□□□ -0.62
NR1I3-211ENST00000442691 STAP2Q9UGK3 403 aa11.2□□□□□ -0.62
NR1I3-211ENST00000442691 COL24A1Q17RW2 1714 aa11.2□□□□□ -0.62
NR1I3-211ENST00000442691 TNS1Q9HBL0 1735 aaKnown RBP11.2□□□□□ -0.62
NR1I3-211ENST00000442691 UBN2Q6ZU65 1347 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 GNPATO15228 680 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 PDE8AO60658 829 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 GABBR2O75899 941 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 CIAO1O76071 339 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 TRIM37O94972 964 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 RFX5P48382 616 aaPredicted RBP11.19□□□□□ -0.62
NR1I3-211ENST00000442691 MFSD10Q14728 455 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 POTEAQ6S8J7 498 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 PLEKHM2Q8IWE5 1019 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 FLAD1Q8NFF5 587 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 RHPN1Q8TCX5 695 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 UTP14AQ9BVJ6 771 aaKnown RBP11.19□□□□□ -0.62
NR1I3-211ENST00000442691 NYXQ9GZU5 481 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 GPR108Q9NPR9 543 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 TBC1D2BQ9UPU7 963 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 EXOC6BQ9Y2D4 811 aa11.19□□□□□ -0.62
NR1I3-211ENST00000442691 TTC41PQ6P2S7 1318 aa11.18□□□□□ -0.62
NR1I3-211ENST00000442691 LRP5O75197 1615 aa11.18□□□□□ -0.62
NR1I3-211ENST00000442691 ZPR1O75312 459 aa11.18□□□□□ -0.62
NR1I3-211ENST00000442691 PTPN12Q05209 780 aaKnown RBP11.18□□□□□ -0.62
NR1I3-211ENST00000442691 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.62
NR1I3-211ENST00000442691 LMBR1LQ6UX01 489 aa11.18□□□□□ -0.62
NR1I3-211ENST00000442691 CLASRPQ8N2M8 674 aaKnown RBP11.18□□□□□ -0.62
NR1I3-211ENST00000442691 DDX27Q96GQ7 796 aaKnown RBP11.18□□□□□ -0.62
NR1I3-211ENST00000442691 TRMT112Q9UI30 125 aaKnown RBP11.18□□□□□ -0.62
NR1I3-211ENST00000442691 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
NR1I3-211ENST00000442691 UBR3Q6ZT12 1888 aa11.17□□□□□ -0.62
NR1I3-211ENST00000442691 NTSR2O95665 410 aa11.17□□□□□ -0.62
NR1I3-211ENST00000442691 CTSWP56202 376 aa11.17□□□□□ -0.62
NR1I3-211ENST00000442691 TXNRD1Q16881 649 aa11.17□□□□□ -0.62
NR1I3-211ENST00000442691 C8orf34Q49A92 452 aa11.17□□□□□ -0.62
NR1I3-211ENST00000442691 EPHA10Q5JZY3 1008 aa11.17□□□□□ -0.62
NR1I3-211ENST00000442691 IER5LQ5T953 404 aa11.17□□□□□ -0.62
NR1I3-211ENST00000442691 TICAM2Q86XR7 235 aa11.17□□□□□ -0.62
NR1I3-211ENST00000442691 GPATCH3Q96I76 525 aa11.17□□□□□ -0.62
NR1I3-211ENST00000442691 OCEL1Q9H607 264 aa11.17□□□□□ -0.62
NR1I3-211ENST00000442691 LRRC4BQ9NT99 713 aa11.17□□□□□ -0.62
NR1I3-211ENST00000442691 NIP7Q9Y221 180 aaKnown RBP eCLIP11.17□□□□□ -0.62
NR1I3-211ENST00000442691 IRS4O14654 1257 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-211ENST00000442691 MX1P20591 662 aa11.16□□□□□ -0.62
NR1I3-211ENST00000442691 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-211ENST00000442691 PDE1AP54750 535 aa11.16□□□□□ -0.62
NR1I3-211ENST00000442691 OS9Q13438 667 aaPredicted RBP11.16□□□□□ -0.62
NR1I3-211ENST00000442691 CCDC57Q2TAC2 916 aa11.16□□□□□ -0.62
NR1I3-211ENST00000442691 SLC10A5Q5PT55 438 aa11.16□□□□□ -0.62
NR1I3-211ENST00000442691 TRAPPC3LQ5T215 181 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms