RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 C1QBPQ07021 282 aaKnown RBP10.93□□□□□ -0.66
TOP3B-209ENST00000442653 LMOD3Q0VAK6 560 aa10.93□□□□□ -0.66
TOP3B-209ENST00000442653 TCIRG1Q13488 830 aa10.93□□□□□ -0.66
TOP3B-209ENST00000442653 NEUROD2Q15784 382 aa10.93□□□□□ -0.66
TOP3B-209ENST00000442653 CST9Q5W186 159 aa10.93□□□□□ -0.66
TOP3B-209ENST00000442653 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
TOP3B-209ENST00000442653 USP50Q70EL3 339 aaPredicted RBP10.93□□□□□ -0.66
TOP3B-209ENST00000442653 CHPF2Q9P2E5 772 aa10.93□□□□□ -0.66
TOP3B-209ENST00000442653 ZNRF3Q9ULT6 936 aa10.93□□□□□ -0.66
TOP3B-209ENST00000442653 TRIM35Q9UPQ4 493 aa10.93□□□□□ -0.66
TOP3B-209ENST00000442653 THSD7BQ9C0I4 1608 aa10.93□□□□□ -0.66
TOP3B-209ENST00000442653 SH3TC1Q8TE82 1336 aa10.92□□□□□ -0.66
TOP3B-209ENST00000442653 BBOX1O75936 387 aa10.92□□□□□ -0.66
TOP3B-209ENST00000442653 HSPA8P11142 646 aaKnown RBP10.92□□□□□ -0.66
TOP3B-209ENST00000442653 GMPSP49915 693 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-209ENST00000442653 HSP90AB3PQ58FF7 597 aa10.92□□□□□ -0.66
TOP3B-209ENST00000442653 DPP8Q6V1X1 898 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-209ENST00000442653 SP8Q8IXZ3 490 aa10.92□□□□□ -0.66
TOP3B-209ENST00000442653 TMX4Q9H1E5 349 aaPredicted RBP10.92□□□□□ -0.66
TOP3B-209ENST00000442653 ADARB2Q9NS39 739 aaKnown RBP10.92□□□□□ -0.66
TOP3B-209ENST00000442653 TRMT112Q9UI30 125 aaKnown RBP10.92□□□□□ -0.66
TOP3B-209ENST00000442653 COL4A1P02462 1669 aa10.92□□□□□ -0.66
TOP3B-209ENST00000442653 RAD17O75943 681 aa10.91□□□□□ -0.66
TOP3B-209ENST00000442653 KIAA2012Q0VF49 1180 aa10.91□□□□□ -0.66
TOP3B-209ENST00000442653 GRAPQ13588 217 aa10.91□□□□□ -0.66
TOP3B-209ENST00000442653 MPNDQ8N594 471 aa10.91□□□□□ -0.66
TOP3B-209ENST00000442653 SUPT20HQ8NEM7 779 aa10.91□□□□□ -0.66
TOP3B-209ENST00000442653 GRAPLQ8TC17 118 aaPredicted RBP10.91□□□□□ -0.66
TOP3B-209ENST00000442653 CAPNS2Q96L46 248 aa10.91□□□□□ -0.66
TOP3B-209ENST00000442653 VPS33BQ9H267 617 aa10.91□□□□□ -0.66
TOP3B-209ENST00000442653 LRRC37AA6NMS7 1700 aa10.91□□□□□ -0.66
TOP3B-209ENST00000442653 DDX60Q8IY21 1712 aaKnown RBP10.91□□□□□ -0.66
TOP3B-209ENST00000442653 TRPM7Q96QT4 1865 aa10.91□□□□□ -0.66
TOP3B-209ENST00000442653 MYBBP1AQ9BQG0 1328 aaKnown RBP10.9□□□□□ -0.66
TOP3B-209ENST00000442653 SHTN1A0MZ66 631 aa10.9□□□□□ -0.66
TOP3B-209ENST00000442653 YDJCA8MPS7 323 aa10.9□□□□□ -0.66
TOP3B-209ENST00000442653 HIRAP54198 1017 aaPredicted RBP10.9□□□□□ -0.66
TOP3B-209ENST00000442653 MAP2K1Q02750 393 aaPredicted RBP10.9□□□□□ -0.66
TOP3B-209ENST00000442653 GRM1Q13255 1194 aa10.9□□□□□ -0.66
TOP3B-209ENST00000442653 CYP4F22Q6NT55 531 aa10.9□□□□□ -0.66
TOP3B-209ENST00000442653 DDX46Q7L014 1031 aaKnown RBP10.9□□□□□ -0.66
TOP3B-209ENST00000442653 GLIS2Q9BZE0 524 aaPredicted RBP10.9□□□□□ -0.66
TOP3B-209ENST00000442653 LAS1LQ9Y4W2 734 aaKnown RBP10.9□□□□□ -0.66
TOP3B-209ENST00000442653 ATP5J2-PTCD1G3V325 749 aa10.89□□□□□ -0.67
TOP3B-209ENST00000442653 DDX10Q13206 875 aaKnown RBP10.89□□□□□ -0.67
TOP3B-209ENST00000442653 HDGFL1Q5TGJ6 251 aa10.89□□□□□ -0.67
TOP3B-209ENST00000442653 CIAPIN1Q6FI81 312 aa10.89□□□□□ -0.67
TOP3B-209ENST00000442653 PAXIP1Q6ZW49 1069 aaPredicted RBP10.89□□□□□ -0.67
TOP3B-209ENST00000442653 PLBD2Q8NHP8 589 aa10.89□□□□□ -0.67
TOP3B-209ENST00000442653 TRPM4Q8TD43 1214 aa10.89□□□□□ -0.67
TOP3B-209ENST00000442653 RUNDC1Q96C34 613 aa10.89□□□□□ -0.67
TOP3B-209ENST00000442653 FAM89AQ96GI7 184 aa10.89□□□□□ -0.67
TOP3B-209ENST00000442653 GPR101Q96P66 508 aaPredicted RBP10.89□□□□□ -0.67
TOP3B-209ENST00000442653 ISCA1Q9BUE6 129 aa10.89□□□□□ -0.67
TOP3B-209ENST00000442653 PGAP2Q9UHJ9 254 aa10.89□□□□□ -0.67
TOP3B-209ENST00000442653 TLL2Q9Y6L7 1015 aa10.89□□□□□ -0.67
TOP3B-209ENST00000442653 CDHR2Q9BYE9 1310 aa10.88□□□□□ -0.67
TOP3B-209ENST00000442653 CELF2O95319 508 aaKnown RBP10.88□□□□□ -0.67
TOP3B-209ENST00000442653 ECE1P42892 770 aa10.88□□□□□ -0.67
TOP3B-209ENST00000442653 RTL5Q5HYW3 569 aaPredicted RBP10.88□□□□□ -0.67
TOP3B-209ENST00000442653 ANKRD13DQ6ZTN6 518 aa10.88□□□□□ -0.67
TOP3B-209ENST00000442653 SAPCD2Q86UD0 394 aa10.88□□□□□ -0.67
TOP3B-209ENST00000442653 CELF1Q92879 486 aaKnown RBP10.88□□□□□ -0.67
TOP3B-209ENST00000442653 BCL2L13Q9BXK5 485 aa10.88□□□□□ -0.67
TOP3B-209ENST00000442653 ADAMTS8Q9UP79 889 aa10.88□□□□□ -0.67
TOP3B-209ENST00000442653 AOC2O75106 756 aa10.87□□□□□ -0.67
TOP3B-209ENST00000442653 HOXB7P09629 217 aa10.87□□□□□ -0.67
TOP3B-209ENST00000442653 TNIP1Q15025 636 aa10.87□□□□□ -0.67
TOP3B-209ENST00000442653 SF3B3Q15393 1217 aaKnown RBP10.87□□□□□ -0.67
TOP3B-209ENST00000442653 DUSP27Q5VZP5 1158 aa10.87□□□□□ -0.67
TOP3B-209ENST00000442653 DLK2Q6UY11 383 aa10.87□□□□□ -0.67
TOP3B-209ENST00000442653 TMC4Q7Z404 712 aa10.87□□□□□ -0.67
TOP3B-209ENST00000442653 DBF4Q9UBU7 674 aaPredicted RBP10.87□□□□□ -0.67
TOP3B-209ENST00000442653 TSKSQ9UJT2 592 aa10.87□□□□□ -0.67
TOP3B-209ENST00000442653 ZBTB12Q9Y330 459 aaPredicted RBP10.87□□□□□ -0.67
TOP3B-209ENST00000442653 EGFRP00533 1210 aa10.86□□□□□ -0.67
TOP3B-209ENST00000442653 GPSM2P81274 684 aa10.86□□□□□ -0.67
TOP3B-209ENST00000442653 WDR43Q15061 677 aaKnown RBP eCLIP10.86□□□□□ -0.67
TOP3B-209ENST00000442653 MICALL2Q8IY33 904 aa10.86□□□□□ -0.67
TOP3B-209ENST00000442653 ZC3H15Q8WU90 426 aaKnown RBP10.86□□□□□ -0.67
TOP3B-209ENST00000442653 ABHD8Q96I13 439 aa10.86□□□□□ -0.67
TOP3B-209ENST00000442653 CFAP44Q96MT7 982 aa10.86□□□□□ -0.67
TOP3B-209ENST00000442653 DBNDD1Q9H9R9 158 aa10.86□□□□□ -0.67
TOP3B-209ENST00000442653 KCNQ5Q9NR82 932 aa10.86□□□□□ -0.67
TOP3B-209ENST00000442653 MBIPQ9NS73 344 aa10.86□□□□□ -0.67
TOP3B-209ENST00000442653 POLLQ9UGP5 575 aa10.86□□□□□ -0.67
TOP3B-209ENST00000442653 CNOT7Q9UIV1 285 aaKnown RBP10.86□□□□□ -0.67
TOP3B-209ENST00000442653 NSFL1CQ9UNZ2 370 aaKnown RBP10.86□□□□□ -0.67
TOP3B-209ENST00000442653 PSMD14O00487 310 aa10.85□□□□□ -0.67
TOP3B-209ENST00000442653 RIMBP2O15034 1052 aa10.85□□□□□ -0.67
TOP3B-209ENST00000442653 TRIM28Q13263 835 aaKnown RBP10.85□□□□□ -0.67
TOP3B-209ENST00000442653 WASHC4Q2M389 1173 aa10.85□□□□□ -0.67
TOP3B-209ENST00000442653 SAMD7Q7Z3H4 446 aa10.85□□□□□ -0.67
TOP3B-209ENST00000442653 BEGAINQ9BUH8 593 aa10.85□□□□□ -0.67
TOP3B-209ENST00000442653 ZNF408Q9H9D4 720 aa10.85□□□□□ -0.67
TOP3B-209ENST00000442653 HYPKQ9NX55 129 aa10.85□□□□□ -0.67
TOP3B-209ENST00000442653 RTL9Q8NET4 1388 aa10.85□□□□□ -0.67
TOP3B-209ENST00000442653 C6orf229H3BNL8 230 aa10.84□□□□□ -0.67
TOP3B-209ENST00000442653 H7C1D1 291 aa10.84□□□□□ -0.67
TOP3B-209ENST00000442653 IRS4O14654 1257 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms