RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 ATP5JP18859 108 aa19.59■□□□□ 0.73
SEMA3B-207ENST00000441915 SCAND2PQ9GZW5 306 aaPredicted RBP19.59■□□□□ 0.73
SEMA3B-207ENST00000441915 NLRP2Q9NX02 1062 aa19.59■□□□□ 0.73
SEMA3B-207ENST00000441915 TAF6LQ9Y6J9 622 aa19.59■□□□□ 0.73
SEMA3B-207ENST00000441915 TATP17735 454 aaPredicted RBP19.58■□□□□ 0.73
SEMA3B-207ENST00000441915 EDC3Q96F86 508 aaKnown RBP19.58■□□□□ 0.73
SEMA3B-207ENST00000441915 PHKG2P15735 406 aa19.58■□□□□ 0.72
SEMA3B-207ENST00000441915 NOLC1Q14978 699 aaKnown RBP eCLIP19.58■□□□□ 0.72
SEMA3B-207ENST00000441915 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.72
SEMA3B-207ENST00000441915 DBNLQ9UJU6 430 aaKnown RBP19.58■□□□□ 0.72
SEMA3B-207ENST00000441915 KDM6AO15550 1401 aaPredicted RBP19.58■□□□□ 0.72
SEMA3B-207ENST00000441915 ZNF142P52746 1687 aaPredicted RBP19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 GOLGA6L4A6NEF3 574 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 TNNI3KQ59H18 835 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 USPL1Q5W0Q7 1092 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 FAM173BQ6P4H8 233 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 MAP7D2Q96T17 732 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 NUP62CLQ9H1M0 184 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 FPGT-TNNI3KV9GXZ4 949 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 RGPD5Q99666 1765 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 PTPN12Q05209 780 aaKnown RBP19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 STK3Q13188 491 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 MAP3K11Q16584 847 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 TTC5Q8N0Z6 440 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 CHMP3Q9Y3E7 222 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 C5P01031 1676 aa19.57■□□□□ 0.72
SEMA3B-207ENST00000441915 SNRPA1P09661 255 aaKnown RBP19.56■□□□□ 0.72
SEMA3B-207ENST00000441915 TRPM3Q9HCF6 1732 aaPredicted RBP19.56■□□□□ 0.72
SEMA3B-207ENST00000441915 TFCP2Q12800 502 aa19.56■□□□□ 0.72
SEMA3B-207ENST00000441915 IFNL2Q8IZJ0 200 aa19.56■□□□□ 0.72
SEMA3B-207ENST00000441915 SCN11AQ9UI33 1791 aa19.56■□□□□ 0.72
SEMA3B-207ENST00000441915 RFX5P48382 616 aaPredicted RBP19.55■□□□□ 0.72
SEMA3B-207ENST00000441915 SPATA32Q96LK8 384 aa19.55■□□□□ 0.72
SEMA3B-207ENST00000441915 NEK1Q96PY6 1258 aa19.55■□□□□ 0.72
SEMA3B-207ENST00000441915 USP16Q9Y5T5 823 aa19.55■□□□□ 0.72
SEMA3B-207ENST00000441915 UBE3BQ7Z3V4 1068 aa19.55■□□□□ 0.72
SEMA3B-207ENST00000441915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.55■□□□□ 0.72
SEMA3B-207ENST00000441915 LIG1P18858 919 aa19.54■□□□□ 0.72
SEMA3B-207ENST00000441915 RABL6Q3YEC7 729 aaPredicted RBP19.54■□□□□ 0.72
SEMA3B-207ENST00000441915 FAM200AQ8TCP9 573 aa19.54■□□□□ 0.72
SEMA3B-207ENST00000441915 JARID2Q92833 1246 aaPredicted RBP19.54■□□□□ 0.72
SEMA3B-207ENST00000441915 RFX7Q2KHR2 1363 aa19.54■□□□□ 0.72
SEMA3B-207ENST00000441915 TPM3P06753 285 aa19.54■□□□□ 0.72
SEMA3B-207ENST00000441915 LRP10Q7Z4F1 713 aa19.54■□□□□ 0.72
SEMA3B-207ENST00000441915 CAMK4Q16566 473 aa19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 GTF3C6Q969F1 213 aa19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 DNAJC2Q99543 621 aaKnown RBP19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 U3KPZ7 1027 aaPredicted RBP19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 GOLGA6L6A8MZA4 724 aa19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 TNMDQ9H2S6 317 aa19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 DACT1Q9NYF0 836 aa19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 TFIP11Q9UBB9 837 aaKnown RBP19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 AP5Z1O43299 807 aa19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 PIP4K2AP48426 406 aaPredicted RBP19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 PRIMPOLQ96LW4 560 aa19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 FMNL2Q96PY5 1086 aa19.53■□□□□ 0.72
SEMA3B-207ENST00000441915 A0A087WZG4 1122 aa19.52■□□□□ 0.72
SEMA3B-207ENST00000441915 TYRO3Q06418 890 aa19.52■□□□□ 0.72
SEMA3B-207ENST00000441915 MCMDC2Q4G0Z9 681 aa19.52■□□□□ 0.72
SEMA3B-207ENST00000441915 MTERF4Q7Z6M4 381 aaKnown RBP19.52■□□□□ 0.72
SEMA3B-207ENST00000441915 LEO1Q8WVC0 666 aaPredicted RBP19.52■□□□□ 0.72
SEMA3B-207ENST00000441915 DDX19AQ9NUU7 478 aaKnown RBP19.52■□□□□ 0.72
SEMA3B-207ENST00000441915 NDUFB9Q9Y6M9 179 aa19.52■□□□□ 0.72
SEMA3B-207ENST00000441915 COL15A1P39059 1388 aa19.52■□□□□ 0.72
SEMA3B-207ENST00000441915 HMGN5P82970 282 aaKnown RBP19.52■□□□□ 0.71
SEMA3B-207ENST00000441915 PROSER2Q86WR7 435 aaPredicted RBP19.52■□□□□ 0.71
SEMA3B-207ENST00000441915 DCAF5Q96JK2 942 aa19.52■□□□□ 0.71
SEMA3B-207ENST00000441915 DBNDD2Q9BQY9 259 aa19.52■□□□□ 0.71
SEMA3B-207ENST00000441915 HSP90B1P14625 803 aaKnown RBP19.51■□□□□ 0.71
SEMA3B-207ENST00000441915 Q6ZUG5 572 aa19.51■□□□□ 0.71
SEMA3B-207ENST00000441915 MYRIPQ8NFW9 859 aa19.51■□□□□ 0.71
SEMA3B-207ENST00000441915 HAUS7Q99871 368 aa19.51■□□□□ 0.71
SEMA3B-207ENST00000441915 SPTLC3Q9NUV7 552 aa19.51■□□□□ 0.71
SEMA3B-207ENST00000441915 C1orf167Q5SNV9 1468 aa19.51■□□□□ 0.71
SEMA3B-207ENST00000441915 CSB-PGBD3P0DP91 1061 aa19.51■□□□□ 0.71
SEMA3B-207ENST00000441915 MRVI1Q9Y6F6 885 aa19.51■□□□□ 0.71
SEMA3B-207ENST00000441915 MST1RQ04912 1400 aa19.5■□□□□ 0.71
SEMA3B-207ENST00000441915 ATP5J2-PTCD1G3V325 749 aa19.5■□□□□ 0.71
SEMA3B-207ENST00000441915 JAK2O60674 1132 aa19.5■□□□□ 0.71
SEMA3B-207ENST00000441915 PTCD1O75127 700 aaKnown RBP19.5■□□□□ 0.71
SEMA3B-207ENST00000441915 CCDC129Q6ZRS4 1044 aa19.5■□□□□ 0.71
SEMA3B-207ENST00000441915 ZNF609O15014 1411 aa19.5■□□□□ 0.71
SEMA3B-207ENST00000441915 KIF1AQ12756 1690 aa19.5■□□□□ 0.71
SEMA3B-207ENST00000441915 CYP21A2P08686 494 aa19.5■□□□□ 0.71
SEMA3B-207ENST00000441915 CKAP2LQ8IYA6 745 aa19.5■□□□□ 0.71
SEMA3B-207ENST00000441915 SEC62Q99442 399 aaKnown RBP19.5■□□□□ 0.71
SEMA3B-207ENST00000441915 MEGF6O75095 1541 aa19.5■□□□□ 0.71
SEMA3B-207ENST00000441915 H3BQV1 296 aa19.49■□□□□ 0.71
SEMA3B-207ENST00000441915 FGD1P98174 961 aa19.49■□□□□ 0.71
SEMA3B-207ENST00000441915 IFFO2Q5TF58 517 aa19.49■□□□□ 0.71
SEMA3B-207ENST00000441915 DDX46Q7L014 1031 aaKnown RBP19.49■□□□□ 0.71
SEMA3B-207ENST00000441915 C17orf53Q8N3J3 647 aaPredicted RBP19.49■□□□□ 0.71
SEMA3B-207ENST00000441915 SPC24Q8NBT2 197 aa19.49■□□□□ 0.71
SEMA3B-207ENST00000441915 AFDNP55196 1824 aaKnown RBP19.49■□□□□ 0.71
SEMA3B-207ENST00000441915 BRF1Q92994 677 aa19.49■□□□□ 0.71
SEMA3B-207ENST00000441915 C19orf44Q9H6X5 657 aa19.49■□□□□ 0.71
SEMA3B-207ENST00000441915 BICD2Q8TD16 824 aa19.48■□□□□ 0.71
SEMA3B-207ENST00000441915 ZSCAN16Q9H4T2 348 aaPredicted RBP19.48■□□□□ 0.71
SEMA3B-207ENST00000441915 KBTBD3Q8NAB2 608 aa19.48■□□□□ 0.71
SEMA3B-207ENST00000441915 PLBD2Q8NHP8 589 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms