RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 CELF1Q92879 486 aaKnown RBP20.28■□□□□ 0.84
TRAPPC12-209ENST00000441099 ZNF277Q9NRM2 450 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC12-209ENST00000441099 CASP7P55210 303 aa20.27■□□□□ 0.84
TRAPPC12-209ENST00000441099 BCL2L13Q9BXK5 485 aa20.27■□□□□ 0.84
TRAPPC12-209ENST00000441099 CCDC152Q4G0S7 254 aa20.26■□□□□ 0.83
TRAPPC12-209ENST00000441099 UBE3BQ7Z3V4 1068 aa20.26■□□□□ 0.83
TRAPPC12-209ENST00000441099 SEC31BQ9NQW1 1179 aa20.26■□□□□ 0.83
TRAPPC12-209ENST00000441099 CTSWP56202 376 aa20.25■□□□□ 0.83
TRAPPC12-209ENST00000441099 TMC4Q7Z404 712 aa20.25■□□□□ 0.83
TRAPPC12-209ENST00000441099 PTPRCP08575 1304 aa20.25■□□□□ 0.83
TRAPPC12-209ENST00000441099 RPS8P62241 208 aaKnown RBP20.24■□□□□ 0.83
TRAPPC12-209ENST00000441099 SLC4A10Q6U841 1118 aa20.24■□□□□ 0.83
TRAPPC12-209ENST00000441099 TTLL11Q8NHH1 800 aa20.24■□□□□ 0.83
TRAPPC12-209ENST00000441099 CCDC85AQ96PX6 553 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC12-209ENST00000441099 PLA2G12BQ9BX93 195 aa20.24■□□□□ 0.83
TRAPPC12-209ENST00000441099 TMX4Q9H1E5 349 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC12-209ENST00000441099 SMC4Q9NTJ3 1288 aa20.24■□□□□ 0.83
TRAPPC12-209ENST00000441099 GLTPD2A6NH11 291 aa20.23■□□□□ 0.83
TRAPPC12-209ENST00000441099 IARSP41252 1262 aaKnown RBP20.23■□□□□ 0.83
TRAPPC12-209ENST00000441099 RTFDC1Q9BY42 306 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC12-209ENST00000441099 KIF3CO14782 793 aa20.22■□□□□ 0.83
TRAPPC12-209ENST00000441099 ALDH1L1O75891 902 aa20.22■□□□□ 0.83
TRAPPC12-209ENST00000441099 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
TRAPPC12-209ENST00000441099 BRPF1P55201 1214 aaPredicted RBP20.22■□□□□ 0.83
TRAPPC12-209ENST00000441099 SRCIN1Q9C0H9 1055 aa20.22■□□□□ 0.83
TRAPPC12-209ENST00000441099 NMRK2Q9NPI5 230 aa20.22■□□□□ 0.83
TRAPPC12-209ENST00000441099 KDM2BQ8NHM5 1336 aa20.22■□□□□ 0.83
TRAPPC12-209ENST00000441099 DPP8Q6V1X1 898 aaPredicted RBP20.21■□□□□ 0.83
TRAPPC12-209ENST00000441099 MPNDQ8N594 471 aa20.21■□□□□ 0.83
TRAPPC12-209ENST00000441099 ZBED9Q6R2W3 1325 aa20.21■□□□□ 0.83
TRAPPC12-209ENST00000441099 GRM8O00222 908 aa20.2■□□□□ 0.82
TRAPPC12-209ENST00000441099 CSF1RP07333 972 aa20.2■□□□□ 0.82
TRAPPC12-209ENST00000441099 GREM2Q9H772 168 aa20.2■□□□□ 0.82
TRAPPC12-209ENST00000441099 RTL9Q8NET4 1388 aa20.2■□□□□ 0.82
TRAPPC12-209ENST00000441099 DDX60Q8IY21 1712 aaKnown RBP20.19■□□□□ 0.82
TRAPPC12-209ENST00000441099 FZD9O00144 591 aa20.19■□□□□ 0.82
TRAPPC12-209ENST00000441099 DPY19L2Q6NUT2 758 aa20.19■□□□□ 0.82
TRAPPC12-209ENST00000441099 VPS33BQ9H267 617 aa20.19■□□□□ 0.82
TRAPPC12-209ENST00000441099 NOB1Q9ULX3 412 aaKnown RBP20.19■□□□□ 0.82
TRAPPC12-209ENST00000441099 FER1L6Q2WGJ9 1857 aa20.19■□□□□ 0.82
TRAPPC12-209ENST00000441099 FOXO4P98177 505 aa20.18■□□□□ 0.82
TRAPPC12-209ENST00000441099 SUPT20HQ8NEM7 779 aa20.18■□□□□ 0.82
TRAPPC12-209ENST00000441099 RRAGCQ9HB90 399 aa20.18■□□□□ 0.82
TRAPPC12-209ENST00000441099 COL4A1P02462 1669 aa20.18■□□□□ 0.82
TRAPPC12-209ENST00000441099 C1QTNF8P60827 252 aa20.17■□□□□ 0.82
TRAPPC12-209ENST00000441099 GPSM2P81274 684 aa20.17■□□□□ 0.82
TRAPPC12-209ENST00000441099 ANKRD18AQ8IVF6 992 aa20.17■□□□□ 0.82
TRAPPC12-209ENST00000441099 LARGE2Q8N3Y3 721 aa20.17■□□□□ 0.82
TRAPPC12-209ENST00000441099 JDP2Q8WYK2 163 aa20.17■□□□□ 0.82
TRAPPC12-209ENST00000441099 CDC5LQ99459 802 aaKnown RBP20.17■□□□□ 0.82
TRAPPC12-209ENST00000441099 C9orf78Q9NZ63 289 aaPredicted RBP20.17■□□□□ 0.82
TRAPPC12-209ENST00000441099 POTECB2RU33 542 aa20.16■□□□□ 0.82
TRAPPC12-209ENST00000441099 PPIP5K2O43314 1243 aa20.16■□□□□ 0.82
TRAPPC12-209ENST00000441099 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
TRAPPC12-209ENST00000441099 AOC3Q16853 763 aa20.16■□□□□ 0.82
TRAPPC12-209ENST00000441099 EPHA10Q5JZY3 1008 aa20.16■□□□□ 0.82
TRAPPC12-209ENST00000441099 NSFL1CQ9UNZ2 370 aaKnown RBP20.16■□□□□ 0.82
TRAPPC12-209ENST00000441099 UTYO14607 1347 aa20.16■□□□□ 0.82
TRAPPC12-209ENST00000441099 ZNF541Q9H0D2 1346 aa20.16■□□□□ 0.82
TRAPPC12-209ENST00000441099 ITGA6P23229 1130 aa20.15■□□□□ 0.82
TRAPPC12-209ENST00000441099 KIAA2012Q0VF49 1180 aa20.15■□□□□ 0.82
TRAPPC12-209ENST00000441099 FAM161AQ3B820 660 aa20.15■□□□□ 0.82
TRAPPC12-209ENST00000441099 BSDC1Q9NW68 430 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC12-209ENST00000441099 PODXL2Q9NZ53 605 aa20.15■□□□□ 0.82
TRAPPC12-209ENST00000441099 POLLQ9UGP5 575 aa20.15■□□□□ 0.82
TRAPPC12-209ENST00000441099 LAMB2P55268 1798 aa20.14■□□□□ 0.81
TRAPPC12-209ENST00000441099 COL4A5P29400 1685 aa20.14■□□□□ 0.81
TRAPPC12-209ENST00000441099 NBPF7P0C2Y1 421 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC12-209ENST00000441099 KAZALD1Q96I82 304 aa20.14■□□□□ 0.81
TRAPPC12-209ENST00000441099 SBF1O95248 1867 aa20.13■□□□□ 0.81
TRAPPC12-209ENST00000441099 BCAR3O75815 825 aa20.13■□□□□ 0.81
TRAPPC12-209ENST00000441099 VEGFAP15692 232 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC12-209ENST00000441099 LMBR1LQ6UX01 489 aa20.13■□□□□ 0.81
TRAPPC12-209ENST00000441099 NIM1KQ8IY84 436 aa20.13■□□□□ 0.81
TRAPPC12-209ENST00000441099 TBC1D16Q8TBP0 767 aa20.13■□□□□ 0.81
TRAPPC12-209ENST00000441099 ARHGAP45Q92619 1136 aa20.13■□□□□ 0.81
TRAPPC12-209ENST00000441099 SUCLG2Q96I99 432 aa20.13■□□□□ 0.81
TRAPPC12-209ENST00000441099 API5Q9BZZ5 524 aaKnown RBP20.13■□□□□ 0.81
TRAPPC12-209ENST00000441099 KIF16BQ96L93 1317 aa20.12■□□□□ 0.81
TRAPPC12-209ENST00000441099 L3MBTL3Q96JM7 780 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC12-209ENST00000441099 USP44Q9H0E7 712 aa20.12■□□□□ 0.81
TRAPPC12-209ENST00000441099 MINPP1Q9UNW1 487 aa20.12■□□□□ 0.81
TRAPPC12-209ENST00000441099 C6orf229H3BNL8 230 aa20.11■□□□□ 0.81
TRAPPC12-209ENST00000441099 TOMM70O94826 608 aa20.11■□□□□ 0.81
TRAPPC12-209ENST00000441099 IGHMBP2P38935 993 aaKnown RBP20.11■□□□□ 0.81
TRAPPC12-209ENST00000441099 WASHC4Q2M389 1173 aa20.11■□□□□ 0.81
TRAPPC12-209ENST00000441099 ANKIB1Q9P2G1 1089 aa20.11■□□□□ 0.81
TRAPPC12-209ENST00000441099 CACNA1SQ13698 1873 aa20.1■□□□□ 0.81
TRAPPC12-209ENST00000441099 DUOX1Q9NRD9 1551 aa20.1■□□□□ 0.81
TRAPPC12-209ENST00000441099 ANKRD18BA2A2Z9 1011 aa20.1■□□□□ 0.81
TRAPPC12-209ENST00000441099 CCT4P50991 539 aaKnown RBP20.1■□□□□ 0.81
TRAPPC12-209ENST00000441099 EIF6P56537 245 aaKnown RBP20.1■□□□□ 0.81
TRAPPC12-209ENST00000441099 IFIT5Q13325 482 aaKnown RBP20.1■□□□□ 0.81
TRAPPC12-209ENST00000441099 GPC2Q8N158 579 aa20.1■□□□□ 0.81
TRAPPC12-209ENST00000441099 GPR101Q96P66 508 aaPredicted RBP20.1■□□□□ 0.81
TRAPPC12-209ENST00000441099 GGA1Q9UJY5 639 aa20.1■□□□□ 0.81
TRAPPC12-209ENST00000441099 ZNRF3Q9ULT6 936 aa20.1■□□□□ 0.81
TRAPPC12-209ENST00000441099 XDHP47989 1333 aa20.09■□□□□ 0.81
TRAPPC12-209ENST00000441099 CACNA1FO60840 1977 aa20.09■□□□□ 0.81
TRAPPC12-209ENST00000441099 UFL1O94874 794 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms