RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 CCDC152Q4G0S7 254 aa25.58■■□□□ 1.69
TSSC4-206ENST00000440813 SLC51AQ86UW1 340 aa25.58■■□□□ 1.69
TSSC4-206ENST00000440813 GRAPLQ8TC17 118 aaPredicted RBP25.58■■□□□ 1.69
TSSC4-206ENST00000440813 API5Q9BZZ5 524 aaKnown RBP25.58■■□□□ 1.69
TSSC4-206ENST00000440813 C9orf78Q9NZ63 289 aaPredicted RBP25.58■■□□□ 1.69
TSSC4-206ENST00000440813 GRM8O00222 908 aa25.57■■□□□ 1.68
TSSC4-206ENST00000440813 BBOX1O75936 387 aa25.57■■□□□ 1.68
TSSC4-206ENST00000440813 CTSWP56202 376 aa25.57■■□□□ 1.68
TSSC4-206ENST00000440813 C9orf131Q5VYM1 1079 aa25.57■■□□□ 1.68
TSSC4-206ENST00000440813 FRAT1Q92837 279 aaPredicted RBP25.57■■□□□ 1.68
TSSC4-206ENST00000440813 CELF1Q92879 486 aaKnown RBP25.56■■□□□ 1.68
TSSC4-206ENST00000440813 SEC31BQ9NQW1 1179 aa25.56■■□□□ 1.68
TSSC4-206ENST00000440813 FER1L6Q2WGJ9 1857 aa25.55■■□□□ 1.68
TSSC4-206ENST00000440813 TTLL11Q8NHH1 800 aa25.55■■□□□ 1.68
TSSC4-206ENST00000440813 TMX4Q9H1E5 349 aaPredicted RBP25.55■■□□□ 1.68
TSSC4-206ENST00000440813 TAOK3Q9H2K8 898 aa25.55■■□□□ 1.68
TSSC4-206ENST00000440813 RNF181Q9P0P0 153 aa25.55■■□□□ 1.68
TSSC4-206ENST00000440813 IPO8O15397 1037 aaKnown RBP25.54■■□□□ 1.68
TSSC4-206ENST00000440813 PRELPP51888 382 aa25.54■■□□□ 1.68
TSSC4-206ENST00000440813 CC2D2BQ6DHV5 1058 aa25.54■■□□□ 1.68
TSSC4-206ENST00000440813 RTKN2Q8IZC4 609 aa25.54■■□□□ 1.68
TSSC4-206ENST00000440813 ARHGAP45Q92619 1136 aa25.54■■□□□ 1.68
TSSC4-206ENST00000440813 PLA2G12BQ9BX93 195 aa25.54■■□□□ 1.68
TSSC4-206ENST00000440813 ATP6V0A2Q9Y487 856 aa25.54■■□□□ 1.68
TSSC4-206ENST00000440813 LMNB1P20700 586 aa25.53■■□□□ 1.68
TSSC4-206ENST00000440813 SBF1O95248 1867 aa25.53■■□□□ 1.68
TSSC4-206ENST00000440813 MYH3P11055 1940 aa25.53■■□□□ 1.68
TSSC4-206ENST00000440813 GREM2Q9H772 168 aa25.52■■□□□ 1.68
TSSC4-206ENST00000440813 COL4A1P02462 1669 aa25.52■■□□□ 1.68
TSSC4-206ENST00000440813 NBPF7P0C2Y1 421 aaPredicted RBP25.51■■□□□ 1.67
TSSC4-206ENST00000440813 CCT4P50991 539 aaKnown RBP25.51■■□□□ 1.67
TSSC4-206ENST00000440813 RPS8P62241 208 aaKnown RBP25.51■■□□□ 1.67
TSSC4-206ENST00000440813 FKBP4Q02790 459 aaKnown RBP eCLIP25.51■■□□□ 1.67
TSSC4-206ENST00000440813 SP8Q8IXZ3 490 aa25.51■■□□□ 1.67
TSSC4-206ENST00000440813 LTBP3Q9NS15 1303 aa25.51■■□□□ 1.67
TSSC4-206ENST00000440813 FOXO4P98177 505 aa25.5■■□□□ 1.67
TSSC4-206ENST00000440813 CCDC88AQ3V6T2 1871 aa25.5■■□□□ 1.67
TSSC4-206ENST00000440813 TNNQ9UQP3 1299 aa25.5■■□□□ 1.67
TSSC4-206ENST00000440813 CSF1RP07333 972 aa25.49■■□□□ 1.67
TSSC4-206ENST00000440813 TRIM27P14373 513 aa25.49■■□□□ 1.67
TSSC4-206ENST00000440813 EPHA10Q5JZY3 1008 aa25.49■■□□□ 1.67
TSSC4-206ENST00000440813 ATF7IPQ6VMQ6 1270 aa25.49■■□□□ 1.67
TSSC4-206ENST00000440813 TMC4Q7Z404 712 aa25.49■■□□□ 1.67
TSSC4-206ENST00000440813 ZNF277Q9NRM2 450 aaPredicted RBP25.49■■□□□ 1.67
TSSC4-206ENST00000440813 SNED1Q8TER0 1413 aa25.48■■□□□ 1.67
TSSC4-206ENST00000440813 UTYO14607 1347 aa25.48■■□□□ 1.67
TSSC4-206ENST00000440813 FAM161AQ3B820 660 aa25.48■■□□□ 1.67
TSSC4-206ENST00000440813 GRIPAP1Q4V328 841 aa25.48■■□□□ 1.67
TSSC4-206ENST00000440813 ZKSCAN2Q63HK3 967 aa25.48■■□□□ 1.67
TSSC4-206ENST00000440813 ANKRD18AQ8IVF6 992 aa25.48■■□□□ 1.67
TSSC4-206ENST00000440813 CLUAP1Q96AJ1 413 aa25.48■■□□□ 1.67
TSSC4-206ENST00000440813 SUCLG2Q96I99 432 aa25.48■■□□□ 1.67
TSSC4-206ENST00000440813 CDC5LQ99459 802 aaKnown RBP25.48■■□□□ 1.67
TSSC4-206ENST00000440813 USP44Q9H0E7 712 aa25.48■■□□□ 1.67
TSSC4-206ENST00000440813 CHMP3Q9Y3E7 222 aa25.48■■□□□ 1.67
TSSC4-206ENST00000440813 LMBR1LQ6UX01 489 aa25.47■■□□□ 1.67
TSSC4-206ENST00000440813 PSMD1Q99460 953 aa25.47■■□□□ 1.67
TSSC4-206ENST00000440813 RTL9Q8NET4 1388 aa25.46■■□□□ 1.67
TSSC4-206ENST00000440813 ITGA6P23229 1130 aa25.46■■□□□ 1.67
TSSC4-206ENST00000440813 MPNDQ8N594 471 aa25.46■■□□□ 1.67
TSSC4-206ENST00000440813 ZNF784Q8NCA9 323 aaPredicted RBP25.46■■□□□ 1.67
TSSC4-206ENST00000440813 DPP8Q6V1X1 898 aaPredicted RBP25.45■■□□□ 1.66
TSSC4-206ENST00000440813 KAZALD1Q96I82 304 aa25.45■■□□□ 1.66
TSSC4-206ENST00000440813 INTS3Q68E01 1043 aaKnown RBP25.44■■□□□ 1.66
TSSC4-206ENST00000440813 ZNF526Q8TF50 670 aaPredicted RBP25.44■■□□□ 1.66
TSSC4-206ENST00000440813 RCAN3Q9UKA8 241 aa25.44■■□□□ 1.66
TSSC4-206ENST00000440813 IARSP41252 1262 aaKnown RBP25.43■■□□□ 1.66
TSSC4-206ENST00000440813 BICC1Q9H694 974 aaKnown RBP25.43■■□□□ 1.66
TSSC4-206ENST00000440813 NSFL1CQ9UNZ2 370 aaKnown RBP25.43■■□□□ 1.66
TSSC4-206ENST00000440813 ANKRD18BA2A2Z9 1011 aa25.42■■□□□ 1.66
TSSC4-206ENST00000440813 IGHMBP2P38935 993 aaKnown RBP25.42■■□□□ 1.66
TSSC4-206ENST00000440813 GPSM2P81274 684 aa25.42■■□□□ 1.66
TSSC4-206ENST00000440813 IFIT5Q13325 482 aaKnown RBP25.42■■□□□ 1.66
TSSC4-206ENST00000440813 LRRC37AA6NMS7 1700 aa25.42■■□□□ 1.66
TSSC4-206ENST00000440813 SPEF2Q9C093 1822 aa25.4■■□□□ 1.66
TSSC4-206ENST00000440813 DICER1Q9UPY3 1922 aaKnown RBP25.4■■□□□ 1.66
TSSC4-206ENST00000440813 UBTFL1P0CB47 393 aaPredicted RBP25.4■■□□□ 1.66
TSSC4-206ENST00000440813 CCDC57Q2TAC2 916 aa25.4■■□□□ 1.66
TSSC4-206ENST00000440813 FTSJ3Q8IY81 847 aaKnown RBP25.4■■□□□ 1.66
TSSC4-206ENST00000440813 SUPT20HQ8NEM7 779 aa25.4■■□□□ 1.66
TSSC4-206ENST00000440813 BSDC1Q9NW68 430 aaPredicted RBP25.4■■□□□ 1.66
TSSC4-206ENST00000440813 TIAM2Q8IVF5 1701 aa25.4■■□□□ 1.66
TSSC4-206ENST00000440813 TMEM57Q8N5G2 664 aa25.39■■□□□ 1.66
TSSC4-206ENST00000440813 MPHOSPH8Q99549 860 aa25.39■■□□□ 1.66
TSSC4-206ENST00000440813 MEIS3Q99687 375 aa25.39■■□□□ 1.66
TSSC4-206ENST00000440813 RTFDC1Q9BY42 306 aaPredicted RBP25.39■■□□□ 1.66
TSSC4-206ENST00000440813 ANKIB1Q9P2G1 1089 aa25.39■■□□□ 1.66
TSSC4-206ENST00000440813 PPIP5K2O43314 1243 aa25.38■■□□□ 1.65
TSSC4-206ENST00000440813 AOC3Q16853 763 aa25.38■■□□□ 1.65
TSSC4-206ENST00000440813 TAF7LQ5H9L4 462 aa25.38■■□□□ 1.65
TSSC4-206ENST00000440813 DZIP1LQ8IYY4 767 aaKnown RBP25.38■■□□□ 1.65
TSSC4-206ENST00000440813 LARGE2Q8N3Y3 721 aa25.38■■□□□ 1.65
TSSC4-206ENST00000440813 ANKRD44Q8N8A2 993 aa25.38■■□□□ 1.65
TSSC4-206ENST00000440813 ZC3H4Q9UPT8 1303 aaKnown RBP25.37■■□□□ 1.65
TSSC4-206ENST00000440813 C6orf229H3BNL8 230 aa25.37■■□□□ 1.65
TSSC4-206ENST00000440813 RABL6Q3YEC7 729 aaPredicted RBP25.37■■□□□ 1.65
TSSC4-206ENST00000440813 ZNF594Q96JF6 807 aaPredicted RBP25.37■■□□□ 1.65
TSSC4-206ENST00000440813 POLLQ9UGP5 575 aa25.37■■□□□ 1.65
TSSC4-206ENST00000440813 MINPP1Q9UNW1 487 aa25.37■■□□□ 1.65
TSSC4-206ENST00000440813 JDP2Q8WYK2 163 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms