RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 OLFM4Q6UX06 510 aa28.49■■■□□ 2.15
CNOT3-203ENST00000440571 FRAT1Q92837 279 aaPredicted RBP28.49■■■□□ 2.15
CNOT3-203ENST00000440571 CCDC85AQ96PX6 553 aaPredicted RBP28.49■■■□□ 2.15
CNOT3-203ENST00000440571 NFKBIEO00221 500 aa28.48■■■□□ 2.15
CNOT3-203ENST00000440571 C9orf131Q5VYM1 1079 aa28.48■■■□□ 2.15
CNOT3-203ENST00000440571 YTHDC1Q96MU7 727 aaKnown RBP28.48■■■□□ 2.15
CNOT3-203ENST00000440571 PLA2G12BQ9BX93 195 aa28.48■■■□□ 2.15
CNOT3-203ENST00000440571 DLEC1Q9Y238 1755 aa28.47■■■□□ 2.15
CNOT3-203ENST00000440571 TTLL11Q8NHH1 800 aa28.47■■■□□ 2.15
CNOT3-203ENST00000440571 ATP6V0A2Q9Y487 856 aa28.47■■■□□ 2.15
CNOT3-203ENST00000440571 CCT4P50991 539 aaKnown RBP28.46■■■□□ 2.15
CNOT3-203ENST00000440571 RPS8P62241 208 aaKnown RBP28.46■■■□□ 2.15
CNOT3-203ENST00000440571 GRIPAP1Q4V328 841 aa28.46■■■□□ 2.15
CNOT3-203ENST00000440571 SP8Q8IXZ3 490 aa28.46■■■□□ 2.15
CNOT3-203ENST00000440571 TAOK3Q9H2K8 898 aa28.46■■■□□ 2.15
CNOT3-203ENST00000440571 SEC31BQ9NQW1 1179 aa28.46■■■□□ 2.15
CNOT3-203ENST00000440571 LMNB1P20700 586 aa28.45■■■□□ 2.14
CNOT3-203ENST00000440571 TMC4Q7Z404 712 aa28.45■■■□□ 2.14
CNOT3-203ENST00000440571 CELF1Q92879 486 aaKnown RBP28.45■■■□□ 2.14
CNOT3-203ENST00000440571 RNF181Q9P0P0 153 aa28.45■■■□□ 2.14
CNOT3-203ENST00000440571 SLX4Q8IY92 1834 aa28.44■■■□□ 2.14
CNOT3-203ENST00000440571 FKBP4Q02790 459 aaKnown RBP eCLIP28.43■■■□□ 2.14
CNOT3-203ENST00000440571 LTBP3Q9NS15 1303 aa28.43■■■□□ 2.14
CNOT3-203ENST00000440571 ARFGEF1Q9Y6D6 1849 aa28.42■■■□□ 2.14
CNOT3-203ENST00000440571 CSF1RP07333 972 aa28.42■■■□□ 2.14
CNOT3-203ENST00000440571 ATF7IPQ6VMQ6 1270 aa28.42■■■□□ 2.14
CNOT3-203ENST00000440571 GREM2Q9H772 168 aa28.42■■■□□ 2.14
CNOT3-203ENST00000440571 NBPF7P0C2Y1 421 aaPredicted RBP28.41■■■□□ 2.14
CNOT3-203ENST00000440571 FOXO4P98177 505 aa28.41■■■□□ 2.14
CNOT3-203ENST00000440571 ZKSCAN2Q63HK3 967 aa28.41■■■□□ 2.14
CNOT3-203ENST00000440571 ANKRD18AQ8IVF6 992 aa28.41■■■□□ 2.14
CNOT3-203ENST00000440571 CDC5LQ99459 802 aaKnown RBP28.41■■■□□ 2.14
CNOT3-203ENST00000440571 PRELPP51888 382 aa28.4■■■□□ 2.14
CNOT3-203ENST00000440571 USP44Q9H0E7 712 aa28.4■■■□□ 2.14
CNOT3-203ENST00000440571 UTYO14607 1347 aa28.4■■■□□ 2.14
CNOT3-203ENST00000440571 TRIM27P14373 513 aa28.39■■■□□ 2.14
CNOT3-203ENST00000440571 PSMD1Q99460 953 aa28.39■■■□□ 2.14
CNOT3-203ENST00000440571 LMBR1LQ6UX01 489 aa28.38■■■□□ 2.13
CNOT3-203ENST00000440571 SLC51AQ86UW1 340 aa28.38■■■□□ 2.13
CNOT3-203ENST00000440571 MPNDQ8N594 471 aa28.38■■■□□ 2.13
CNOT3-203ENST00000440571 SUCLG2Q96I99 432 aa28.38■■■□□ 2.13
CNOT3-203ENST00000440571 ZNF277Q9NRM2 450 aaPredicted RBP28.38■■■□□ 2.13
CNOT3-203ENST00000440571 CHMP3Q9Y3E7 222 aa28.38■■■□□ 2.13
CNOT3-203ENST00000440571 DDX60Q8IY21 1712 aaKnown RBP28.38■■■□□ 2.13
CNOT3-203ENST00000440571 ITGA6P23229 1130 aa28.37■■■□□ 2.13
CNOT3-203ENST00000440571 EPHA10Q5JZY3 1008 aa28.37■■■□□ 2.13
CNOT3-203ENST00000440571 INTS3Q68E01 1043 aaKnown RBP28.37■■■□□ 2.13
CNOT3-203ENST00000440571 DPP8Q6V1X1 898 aaPredicted RBP28.37■■■□□ 2.13
CNOT3-203ENST00000440571 CLUAP1Q96AJ1 413 aa28.37■■■□□ 2.13
CNOT3-203ENST00000440571 RCAN3Q9UKA8 241 aa28.36■■■□□ 2.13
CNOT3-203ENST00000440571 RTL9Q8NET4 1388 aa28.36■■■□□ 2.13
CNOT3-203ENST00000440571 ANKRD18BA2A2Z9 1011 aa28.35■■■□□ 2.13
CNOT3-203ENST00000440571 FAM161AQ3B820 660 aa28.35■■■□□ 2.13
CNOT3-203ENST00000440571 SUPT20HQ8NEM7 779 aa28.35■■■□□ 2.13
CNOT3-203ENST00000440571 TNNQ9UQP3 1299 aa28.35■■■□□ 2.13
CNOT3-203ENST00000440571 IGHMBP2P38935 993 aaKnown RBP28.34■■■□□ 2.13
CNOT3-203ENST00000440571 IFIT5Q13325 482 aaKnown RBP28.34■■■□□ 2.13
CNOT3-203ENST00000440571 ZNF784Q8NCA9 323 aaPredicted RBP28.34■■■□□ 2.13
CNOT3-203ENST00000440571 NSFL1CQ9UNZ2 370 aaKnown RBP28.34■■■□□ 2.13
CNOT3-203ENST00000440571 IARSP41252 1262 aaKnown RBP28.33■■■□□ 2.13
CNOT3-203ENST00000440571 CCDC57Q2TAC2 916 aa28.33■■■□□ 2.13
CNOT3-203ENST00000440571 KAZALD1Q96I82 304 aa28.33■■■□□ 2.13
CNOT3-203ENST00000440571 BSDC1Q9NW68 430 aaPredicted RBP28.33■■■□□ 2.13
CNOT3-203ENST00000440571 HDAC5Q9UQL6 1122 aa28.33■■■□□ 2.13
CNOT3-203ENST00000440571 CHD4Q14839 1912 aa28.32■■■□□ 2.12
CNOT3-203ENST00000440571 MPHOSPH8Q99549 860 aa28.32■■■□□ 2.12
CNOT3-203ENST00000440571 RTFDC1Q9BY42 306 aaPredicted RBP28.32■■■□□ 2.12
CNOT3-203ENST00000440571 UBTFL1P0CB47 393 aaPredicted RBP28.31■■■□□ 2.12
CNOT3-203ENST00000440571 GPSM2P81274 684 aa28.31■■■□□ 2.12
CNOT3-203ENST00000440571 FTSJ3Q8IY81 847 aaKnown RBP28.31■■■□□ 2.12
CNOT3-203ENST00000440571 BICC1Q9H694 974 aaKnown RBP28.31■■■□□ 2.12
CNOT3-203ENST00000440571 LAMB2P55268 1798 aa28.31■■■□□ 2.12
CNOT3-203ENST00000440571 SNED1Q8TER0 1413 aa28.3■■■□□ 2.12
CNOT3-203ENST00000440571 DZIP1LQ8IYY4 767 aaKnown RBP28.3■■■□□ 2.12
CNOT3-203ENST00000440571 ZNF526Q8TF50 670 aaPredicted RBP28.3■■■□□ 2.12
CNOT3-203ENST00000440571 VPS33BQ9H267 617 aa28.3■■■□□ 2.12
CNOT3-203ENST00000440571 ANKIB1Q9P2G1 1089 aa28.3■■■□□ 2.12
CNOT3-203ENST00000440571 ZC3H4Q9UPT8 1303 aaKnown RBP28.29■■■□□ 2.12
CNOT3-203ENST00000440571 TAF7LQ5H9L4 462 aa28.29■■■□□ 2.12
CNOT3-203ENST00000440571 C6orf229H3BNL8 230 aa28.28■■■□□ 2.12
CNOT3-203ENST00000440571 LARGE2Q8N3Y3 721 aa28.28■■■□□ 2.12
CNOT3-203ENST00000440571 TMEM57Q8N5G2 664 aa28.28■■■□□ 2.12
CNOT3-203ENST00000440571 JDP2Q8WYK2 163 aa28.28■■■□□ 2.12
CNOT3-203ENST00000440571 MINPP1Q9UNW1 487 aa28.28■■■□□ 2.12
CNOT3-203ENST00000440571 CACNA1SQ13698 1873 aa28.27■■■□□ 2.12
CNOT3-203ENST00000440571 PPIP5K2O43314 1243 aa28.27■■■□□ 2.12
CNOT3-203ENST00000440571 GNAI3P08754 354 aa28.27■■■□□ 2.12
CNOT3-203ENST00000440571 RABL6Q3YEC7 729 aaPredicted RBP28.27■■■□□ 2.12
CNOT3-203ENST00000440571 MEIS3Q99687 375 aa28.27■■■□□ 2.12
CNOT3-203ENST00000440571 PODXL2Q9NZ53 605 aa28.27■■■□□ 2.12
CNOT3-203ENST00000440571 DPY19L2Q6NUT2 758 aa28.26■■■□□ 2.11
CNOT3-203ENST00000440571 ANKRD44Q8N8A2 993 aa28.26■■■□□ 2.11
CNOT3-203ENST00000440571 POLLQ9UGP5 575 aa28.26■■■□□ 2.11
CNOT3-203ENST00000440571 MS4A1P11836 297 aa28.25■■■□□ 2.11
CNOT3-203ENST00000440571 AOC3Q16853 763 aa28.25■■■□□ 2.11
CNOT3-203ENST00000440571 TBC1D16Q8TBP0 767 aa28.25■■■□□ 2.11
CNOT3-203ENST00000440571 GPBP1L1Q9HC44 474 aaPredicted RBP28.25■■■□□ 2.11
CNOT3-203ENST00000440571 GGA1Q9UJY5 639 aa28.25■■■□□ 2.11
CNOT3-203ENST00000440571 FER1L6Q2WGJ9 1857 aa28.25■■■□□ 2.11
CNOT3-203ENST00000440571 WASHC4Q2M389 1173 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms