RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 NEURL1BA8MQ27 555 aa17.55■□□□□ 0.4
LTBR-202ENST00000440421 E9PSI1 815 aa17.55■□□□□ 0.4
LTBR-202ENST00000440421 TOMM70O94826 608 aa17.55■□□□□ 0.4
LTBR-202ENST00000440421 GRIPAP1Q4V328 841 aa17.55■□□□□ 0.4
LTBR-202ENST00000440421 CELF1Q92879 486 aaKnown RBP17.55■□□□□ 0.4
LTBR-202ENST00000440421 CDCA7LQ96GN5 454 aa17.55■□□□□ 0.4
LTBR-202ENST00000440421 PDE8AO60658 829 aa17.54■□□□□ 0.4
LTBR-202ENST00000440421 DDNO94850 711 aaPredicted RBP17.54■□□□□ 0.4
LTBR-202ENST00000440421 HSP90B1P14625 803 aaKnown RBP17.54■□□□□ 0.4
LTBR-202ENST00000440421 SLFN5Q08AF3 891 aa17.54■□□□□ 0.4
LTBR-202ENST00000440421 SP8Q8IXZ3 490 aa17.54■□□□□ 0.4
LTBR-202ENST00000440421 DNAAF4Q8WXU2 420 aa17.54■□□□□ 0.4
LTBR-202ENST00000440421 CCDC85AQ96PX6 553 aaPredicted RBP17.54■□□□□ 0.4
LTBR-202ENST00000440421 COL4A1P02462 1669 aa17.53■□□□□ 0.4
LTBR-202ENST00000440421 F6X3S4 739 aa17.53■□□□□ 0.4
LTBR-202ENST00000440421 MPNDQ8N594 471 aa17.53■□□□□ 0.4
LTBR-202ENST00000440421 ZNF541Q9H0D2 1346 aa17.52■□□□□ 0.4
LTBR-202ENST00000440421 VEGFAP15692 232 aaPredicted RBP17.52■□□□□ 0.4
LTBR-202ENST00000440421 DPP8Q6V1X1 898 aaPredicted RBP17.52■□□□□ 0.4
LTBR-202ENST00000440421 UBE3BQ7Z3V4 1068 aa17.52■□□□□ 0.4
LTBR-202ENST00000440421 LARGE2Q8N3Y3 721 aa17.52■□□□□ 0.4
LTBR-202ENST00000440421 JDP2Q8WYK2 163 aa17.52■□□□□ 0.4
LTBR-202ENST00000440421 SEC31BQ9NQW1 1179 aa17.52■□□□□ 0.4
LTBR-202ENST00000440421 COL4A5P29400 1685 aa17.52■□□□□ 0.39
LTBR-202ENST00000440421 CDHR2Q9BYE9 1310 aa17.51■□□□□ 0.39
LTBR-202ENST00000440421 PPIP5K2O43314 1243 aa17.51■□□□□ 0.39
LTBR-202ENST00000440421 GCKRQ14397 625 aa17.51■□□□□ 0.39
LTBR-202ENST00000440421 AOC3Q16853 763 aa17.51■□□□□ 0.39
LTBR-202ENST00000440421 CCDC152Q4G0S7 254 aa17.51■□□□□ 0.39
LTBR-202ENST00000440421 WDR90Q96KV7 1748 aa17.51■□□□□ 0.39
LTBR-202ENST00000440421 POTECB2RU33 542 aa17.5■□□□□ 0.39
LTBR-202ENST00000440421 H7C1W4 665 aa17.5■□□□□ 0.39
LTBR-202ENST00000440421 RPS8P62241 208 aaKnown RBP17.5■□□□□ 0.39
LTBR-202ENST00000440421 TMC4Q7Z404 712 aa17.5■□□□□ 0.39
LTBR-202ENST00000440421 SUPT20HQ8NEM7 779 aa17.5■□□□□ 0.39
LTBR-202ENST00000440421 LINS1Q8NG48 757 aa17.5■□□□□ 0.39
LTBR-202ENST00000440421 FZD9O00144 591 aa17.49■□□□□ 0.39
LTBR-202ENST00000440421 CTSWP56202 376 aa17.49■□□□□ 0.39
LTBR-202ENST00000440421 NIM1KQ8IY84 436 aa17.49■□□□□ 0.39
LTBR-202ENST00000440421 RBM46Q8TBY0 533 aaKnown RBP17.49■□□□□ 0.39
LTBR-202ENST00000440421 RTFDC1Q9BY42 306 aaPredicted RBP17.49■□□□□ 0.39
LTBR-202ENST00000440421 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
LTBR-202ENST00000440421 LRRC37AA6NMS7 1700 aa17.49■□□□□ 0.39
LTBR-202ENST00000440421 EIF6P56537 245 aaKnown RBP17.48■□□□□ 0.39
LTBR-202ENST00000440421 GPSM2P81274 684 aa17.47■□□□□ 0.39
LTBR-202ENST00000440421 BEND3Q5T5X7 828 aa17.47■□□□□ 0.39
LTBR-202ENST00000440421 SLC4A10Q6U841 1118 aa17.47■□□□□ 0.39
LTBR-202ENST00000440421 MRPL50Q8N5N7 158 aaKnown RBP17.47■□□□□ 0.39
LTBR-202ENST00000440421 TTLL11Q8NHH1 800 aa17.47■□□□□ 0.39
LTBR-202ENST00000440421 BCL2L13Q9BXK5 485 aa17.47■□□□□ 0.39
LTBR-202ENST00000440421 GJA3Q9Y6H8 435 aa17.47■□□□□ 0.39
LTBR-202ENST00000440421 DUOX1Q9NRD9 1551 aa17.46■□□□□ 0.39
LTBR-202ENST00000440421 HSPA6P17066 643 aa17.46■□□□□ 0.39
LTBR-202ENST00000440421 CASP7P55210 303 aa17.46■□□□□ 0.39
LTBR-202ENST00000440421 ANKRD18AQ8IVF6 992 aa17.46■□□□□ 0.39
LTBR-202ENST00000440421 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
LTBR-202ENST00000440421 SSH1Q8WYL5 1049 aa17.46■□□□□ 0.39
LTBR-202ENST00000440421 GREM2Q9H772 168 aa17.46■□□□□ 0.39
LTBR-202ENST00000440421 MYH3P11055 1940 aa17.46■□□□□ 0.39
LTBR-202ENST00000440421 C6orf229H3BNL8 230 aa17.45■□□□□ 0.38
LTBR-202ENST00000440421 KIAA2012Q0VF49 1180 aa17.45■□□□□ 0.38
LTBR-202ENST00000440421 GPC2Q8N158 579 aa17.45■□□□□ 0.38
LTBR-202ENST00000440421 SMC1BQ8NDV3 1235 aa17.45■□□□□ 0.38
LTBR-202ENST00000440421 L3MBTL3Q96JM7 780 aaPredicted RBP17.45■□□□□ 0.38
LTBR-202ENST00000440421 VPS33BQ9H267 617 aa17.45■□□□□ 0.38
LTBR-202ENST00000440421 IQCA1LA6NCM1 817 aa17.44■□□□□ 0.38
LTBR-202ENST00000440421 RIMBP2O15034 1052 aa17.44■□□□□ 0.38
LTBR-202ENST00000440421 FSTL1Q12841 308 aa17.44■□□□□ 0.38
LTBR-202ENST00000440421 CDC5LQ99459 802 aaKnown RBP17.44■□□□□ 0.38
LTBR-202ENST00000440421 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
LTBR-202ENST00000440421 SPEF2Q9C093 1822 aa17.43■□□□□ 0.38
LTBR-202ENST00000440421 WASHC4Q2M389 1173 aa17.43■□□□□ 0.38
LTBR-202ENST00000440421 GPR101Q96P66 508 aaPredicted RBP17.43■□□□□ 0.38
LTBR-202ENST00000440421 PLA2G12BQ9BX93 195 aa17.43■□□□□ 0.38
LTBR-202ENST00000440421 ANKIB1Q9P2G1 1089 aa17.43■□□□□ 0.38
LTBR-202ENST00000440421 HACL1Q9UJ83 578 aa17.43■□□□□ 0.38
LTBR-202ENST00000440421 ZNRF3Q9ULT6 936 aa17.43■□□□□ 0.38
LTBR-202ENST00000440421 SCN4AP35499 1836 aa17.42■□□□□ 0.38
LTBR-202ENST00000440421 GRM8O00222 908 aa17.42■□□□□ 0.38
LTBR-202ENST00000440421 POTEIP0CG38 1075 aa17.42■□□□□ 0.38
LTBR-202ENST00000440421 POTEJP0CG39 1038 aa17.42■□□□□ 0.38
LTBR-202ENST00000440421 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
LTBR-202ENST00000440421 FAM161AQ3B820 660 aa17.42■□□□□ 0.38
LTBR-202ENST00000440421 TBC1D16Q8TBP0 767 aa17.42■□□□□ 0.38
LTBR-202ENST00000440421 SRCIN1Q9C0H9 1055 aa17.42■□□□□ 0.38
LTBR-202ENST00000440421 TAF1DQ9H5J8 278 aaPredicted RBP17.42■□□□□ 0.38
LTBR-202ENST00000440421 SMC4Q9NTJ3 1288 aa17.42■□□□□ 0.38
LTBR-202ENST00000440421 RTL9Q8NET4 1388 aa17.41■□□□□ 0.38
LTBR-202ENST00000440421 LTBP1Q14766 1721 aa17.41■□□□□ 0.38
LTBR-202ENST00000440421 ALDH1L1O75891 902 aa17.41■□□□□ 0.38
LTBR-202ENST00000440421 UFL1O94874 794 aa17.41■□□□□ 0.38
LTBR-202ENST00000440421 CXCL9Q07325 125 aa17.41■□□□□ 0.38
LTBR-202ENST00000440421 ALDH1L2Q3SY69 923 aa17.41■□□□□ 0.38
LTBR-202ENST00000440421 EAPPQ56P03 285 aaPredicted RBP17.41■□□□□ 0.38
LTBR-202ENST00000440421 C9orf78Q9NZ63 289 aaPredicted RBP17.41■□□□□ 0.38
LTBR-202ENST00000440421 PTPRCP08575 1304 aa17.41■□□□□ 0.38
LTBR-202ENST00000440421 RAD17O75943 681 aa17.4■□□□□ 0.38
LTBR-202ENST00000440421 CSF1RP07333 972 aa17.4■□□□□ 0.38
LTBR-202ENST00000440421 ITGA6P23229 1130 aa17.4■□□□□ 0.38
LTBR-202ENST00000440421 EPHX2P34913 555 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms