RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 NOL7Q9UMY1 257 aaKnown RBP23.84■■□□□ 1.41
FMR1-208ENST00000440235 MCM6Q14566 821 aa23.84■■□□□ 1.41
FMR1-208ENST00000440235 CDK5RAP3Q96JB5 506 aa23.84■■□□□ 1.41
FMR1-208ENST00000440235 MTHFSDQ2M296 383 aaKnown RBP23.83■■□□□ 1.41
FMR1-208ENST00000440235 NDUFB9Q9Y6M9 179 aa23.83■■□□□ 1.41
FMR1-208ENST00000440235 UVSSAQ2YD98 709 aa23.83■■□□□ 1.41
FMR1-208ENST00000440235 KIAA1328Q86T90 577 aa23.83■■□□□ 1.41
FMR1-208ENST00000440235 PLCD4Q9BRC7 762 aa23.83■■□□□ 1.4
FMR1-208ENST00000440235 STX1AQ16623 288 aa23.82■■□□□ 1.4
FMR1-208ENST00000440235 NACAP1Q9BZK3 213 aa23.82■■□□□ 1.4
FMR1-208ENST00000440235 ATP8B2P98198 1209 aa23.82■■□□□ 1.4
FMR1-208ENST00000440235 BICDL1Q6ZP65 573 aa23.82■■□□□ 1.4
FMR1-208ENST00000440235 EIF3JO75822 258 aaKnown RBP23.81■■□□□ 1.4
FMR1-208ENST00000440235 KLHDC4Q8TBB5 520 aa23.81■■□□□ 1.4
FMR1-208ENST00000440235 JAKMIP3Q5VZ66 844 aa23.81■■□□□ 1.4
FMR1-208ENST00000440235 KRT18P05783 430 aaKnown RBP23.81■■□□□ 1.4
FMR1-208ENST00000440235 CASQ1P31415 396 aa23.81■■□□□ 1.4
FMR1-208ENST00000440235 PLEKHF1Q96S99 279 aa23.81■■□□□ 1.4
FMR1-208ENST00000440235 TTC21BQ7Z4L5 1316 aa23.8■■□□□ 1.4
FMR1-208ENST00000440235 ZNF213O14771 459 aa23.8■■□□□ 1.4
FMR1-208ENST00000440235 PHACTR2O75167 634 aa23.8■■□□□ 1.4
FMR1-208ENST00000440235 NMIQ13287 307 aaPredicted RBP23.8■■□□□ 1.4
FMR1-208ENST00000440235 Q6ZUG5 572 aa23.8■■□□□ 1.4
FMR1-208ENST00000440235 PRDM11Q9NQV5 511 aa23.8■■□□□ 1.4
FMR1-208ENST00000440235 LMTK2Q8IWU2 1503 aa23.8■■□□□ 1.4
FMR1-208ENST00000440235 MATR3P43243 847 aaKnown RBP eCLIP23.79■■□□□ 1.46e-8■□□□□ 8.7
FMR1-208ENST00000440235 RXRAP19793 462 aa23.79■■□□□ 1.4
FMR1-208ENST00000440235 TAX1BP1Q86VP1 789 aa23.79■■□□□ 1.4
FMR1-208ENST00000440235 CCDC12Q8WUD4 166 aaPredicted RBP23.79■■□□□ 1.4
FMR1-208ENST00000440235 GLI2P10070 1586 aa23.79■■□□□ 1.4
FMR1-208ENST00000440235 PNMA6EA0A0J9YXQ4 647 aa23.79■■□□□ 1.4
FMR1-208ENST00000440235 GTF3C6Q969F1 213 aa23.79■■□□□ 1.4
FMR1-208ENST00000440235 RIOK3O14730 519 aaKnown RBP23.79■■□□□ 1.4
FMR1-208ENST00000440235 CRACR2AQ9BSW2 395 aa23.79■■□□□ 1.4
FMR1-208ENST00000440235 NAPBQ9H115 298 aa23.78■■□□□ 1.4
FMR1-208ENST00000440235 DACH1Q9UI36 760 aa23.78■■□□□ 1.4
FMR1-208ENST00000440235 CDKL5O76039 1030 aa23.78■■□□□ 1.4
FMR1-208ENST00000440235 GSPT1P15170 499 aaKnown RBP23.78■■□□□ 1.4
FMR1-208ENST00000440235 ODF2Q5BJF6 829 aa23.78■■□□□ 1.4
FMR1-208ENST00000440235 ZFYVE9O95405 1425 aa23.78■■□□□ 1.4
FMR1-208ENST00000440235 IFIT3O14879 490 aaKnown RBP23.78■■□□□ 1.4
FMR1-208ENST00000440235 ZSCAN12O43309 604 aa23.78■■□□□ 1.4
FMR1-208ENST00000440235 SRRTQ9BXP5 876 aaKnown RBP23.78■■□□□ 1.4
FMR1-208ENST00000440235 TSPOAP1O95153 1857 aa23.78■■□□□ 1.4
FMR1-208ENST00000440235 KLF18A0A0U1RQI7 1052 aa23.77■■□□□ 1.4
FMR1-208ENST00000440235 TCEAL9Q9UHQ7 104 aa23.77■■□□□ 1.4
FMR1-208ENST00000440235 RDXP35241 583 aaKnown RBP23.77■■□□□ 1.4
FMR1-208ENST00000440235 KIF5CO60282 957 aa23.77■■□□□ 1.4
FMR1-208ENST00000440235 PALD1Q9ULE6 856 aa23.77■■□□□ 1.4
FMR1-208ENST00000440235 QRICH2Q9H0J4 1663 aa23.77■■□□□ 1.4
FMR1-208ENST00000440235 IL13P35225 146 aa23.76■■□□□ 1.39
FMR1-208ENST00000440235 UBASH3AP57075 661 aa23.76■■□□□ 1.39
FMR1-208ENST00000440235 SYT10Q6XYQ8 523 aa23.76■■□□□ 1.39
FMR1-208ENST00000440235 KRT222Q8N1A0 295 aa23.76■■□□□ 1.39
FMR1-208ENST00000440235 IQSEC3Q9UPP2 1182 aaPredicted RBP23.76■■□□□ 1.39
FMR1-208ENST00000440235 RANBP6O60518 1105 aaKnown RBP23.76■■□□□ 1.39
FMR1-208ENST00000440235 DEPDC5O75140 1603 aa23.76■■□□□ 1.39
FMR1-208ENST00000440235 KIF2AO00139 706 aaPredicted RBP23.76■■□□□ 1.39
FMR1-208ENST00000440235 APOBRQ0VD83 1088 aa23.76■■□□□ 1.39
FMR1-208ENST00000440235 IPO4Q8TEX9 1081 aaKnown RBP23.76■■□□□ 1.39
FMR1-208ENST00000440235 CCDC43Q96MW1 224 aaKnown RBP23.76■■□□□ 1.39
FMR1-208ENST00000440235 VWDEQ8N2E2 1590 aa23.76■■□□□ 1.39
FMR1-208ENST00000440235 AFMP43652 599 aa23.75■■□□□ 1.39
FMR1-208ENST00000440235 OTUD7BQ6GQQ9 843 aa23.75■■□□□ 1.39
FMR1-208ENST00000440235 NUP88Q99567 741 aaPredicted RBP23.75■■□□□ 1.39
FMR1-208ENST00000440235 CCDC94Q9BW85 323 aaPredicted RBP23.75■■□□□ 1.39
FMR1-208ENST00000440235 BBXQ8WY36 941 aaPredicted RBP23.75■■□□□ 1.39
FMR1-208ENST00000440235 METP08581 1390 aa23.75■■□□□ 1.39
FMR1-208ENST00000440235 COPS6Q7L5N1 327 aa23.75■■□□□ 1.39
FMR1-208ENST00000440235 A0A1B0GVL5 298 aa23.74■■□□□ 1.39
FMR1-208ENST00000440235 KIAA0754O94854 1291 aa23.74■■□□□ 1.39
FMR1-208ENST00000440235 LRRC59Q96AG4 307 aaKnown RBP23.74■■□□□ 1.39
FMR1-208ENST00000440235 FAM107BQ9H098 131 aa23.74■■□□□ 1.39
FMR1-208ENST00000440235 ARHGAP31Q2M1Z3 1444 aa23.74■■□□□ 1.39
FMR1-208ENST00000440235 GOLGA8AA7E2F4 631 aa23.74■■□□□ 1.39
FMR1-208ENST00000440235 CTAGE5O15320 804 aa23.74■■□□□ 1.39
FMR1-208ENST00000440235 CCDC129Q6ZRS4 1044 aa23.74■■□□□ 1.39
FMR1-208ENST00000440235 PRM3Q9NNZ6 103 aa23.74■■□□□ 1.39
FMR1-208ENST00000440235 MSH6P52701 1360 aa23.74■■□□□ 1.39
FMR1-208ENST00000440235 ANAPC15P60006 121 aa23.73■■□□□ 1.39
FMR1-208ENST00000440235 KARSQ15046 597 aaKnown RBP23.73■■□□□ 1.39
FMR1-208ENST00000440235 SLC26A6Q9BXS9 759 aa23.73■■□□□ 1.39
FMR1-208ENST00000440235 IFNKQ9P0W0 207 aa23.73■■□□□ 1.39
FMR1-208ENST00000440235 STIM1Q13586 685 aa23.73■■□□□ 1.39
FMR1-208ENST00000440235 USP5P45974 858 aa23.73■■□□□ 1.39
FMR1-208ENST00000440235 CREB3L3Q68CJ9 461 aa23.73■■□□□ 1.39
FMR1-208ENST00000440235 CHRNA2Q15822 529 aa23.73■■□□□ 1.39
FMR1-208ENST00000440235 STX17P56962 302 aa23.72■■□□□ 1.39
FMR1-208ENST00000440235 XAGE3Q8WTP9 111 aa23.72■■□□□ 1.39
FMR1-208ENST00000440235 SETBP1Q9Y6X0 1596 aa23.72■■□□□ 1.39
FMR1-208ENST00000440235 SYKP43405 635 aa23.72■■□□□ 1.39
FMR1-208ENST00000440235 SEPT11Q9NVA2 429 aaKnown RBP23.72■■□□□ 1.39
FMR1-208ENST00000440235 SLC12A7Q9Y666 1083 aa23.72■■□□□ 1.39
FMR1-208ENST00000440235 MROH2AA6NES4 1674 aa23.72■■□□□ 1.39
FMR1-208ENST00000440235 BMS1Q14692 1282 aaKnown RBP23.72■■□□□ 1.39
FMR1-208ENST00000440235 IARSP41252 1262 aaKnown RBP23.71■■□□□ 1.39
FMR1-208ENST00000440235 PPARDQ03181 441 aa23.71■■□□□ 1.39
FMR1-208ENST00000440235 LRMPQ12912 555 aa23.71■■□□□ 1.39
FMR1-208ENST00000440235 LMBR1LQ6UX01 489 aa23.71■■□□□ 1.39
FMR1-208ENST00000440235 FAM227BQ96M60 508 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms