RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 GRIPAP1Q4V328 841 aa30.15■■■□□ 2.42
VARS-217ENST00000440048 NMRK2Q9NPI5 230 aa30.15■■■□□ 2.42
VARS-217ENST00000440048 CDHR2Q9BYE9 1310 aa30.15■■■□□ 2.42
VARS-217ENST00000440048 F6X3S4 739 aa30.14■■■□□ 2.42
VARS-217ENST00000440048 PDE8AO60658 829 aa30.14■■■□□ 2.42
VARS-217ENST00000440048 LINS1Q8NG48 757 aa30.13■■■□□ 2.41
VARS-217ENST00000440048 TMX4Q9H1E5 349 aaPredicted RBP30.13■■■□□ 2.41
VARS-217ENST00000440048 GLTPD2A6NH11 291 aa30.12■■■□□ 2.41
VARS-217ENST00000440048 TOMM70O94826 608 aa30.12■■■□□ 2.41
VARS-217ENST00000440048 GCKRQ14397 625 aa30.12■■■□□ 2.41
VARS-217ENST00000440048 SP8Q8IXZ3 490 aa30.12■■■□□ 2.41
VARS-217ENST00000440048 COL4A1P02462 1669 aa30.11■■■□□ 2.41
VARS-217ENST00000440048 H7C1W4 665 aa30.11■■■□□ 2.41
VARS-217ENST00000440048 IARSP41252 1262 aaKnown RBP30.11■■■□□ 2.41
VARS-217ENST00000440048 MRPL50Q8N5N7 158 aaKnown RBP30.11■■■□□ 2.41
VARS-217ENST00000440048 CELF1Q92879 486 aaKnown RBP30.11■■■□□ 2.41
VARS-217ENST00000440048 MYH3P11055 1940 aa30.1■■■□□ 2.41
VARS-217ENST00000440048 CCDC152Q4G0S7 254 aa30.09■■■□□ 2.41
VARS-217ENST00000440048 BEND3Q5T5X7 828 aa30.09■■■□□ 2.41
VARS-217ENST00000440048 UBE3BQ7Z3V4 1068 aa30.09■■■□□ 2.41
VARS-217ENST00000440048 TMC4Q7Z404 712 aa30.09■■■□□ 2.41
VARS-217ENST00000440048 SSH1Q8WYL5 1049 aa30.09■■■□□ 2.41
VARS-217ENST00000440048 C16orf71Q8IYS4 520 aaPredicted RBP30.08■■■□□ 2.41
VARS-217ENST00000440048 SEC31BQ9NQW1 1179 aa30.08■■■□□ 2.41
VARS-217ENST00000440048 LRRC37AA6NMS7 1700 aa30.08■■■□□ 2.41
VARS-217ENST00000440048 CEP350Q5VT06 3117 aa30.07■■■□□ 2.4
VARS-217ENST00000440048 DPY19L2Q6NUT2 758 aa30.07■■■□□ 2.4
VARS-217ENST00000440048 CCDC85AQ96PX6 553 aaPredicted RBP30.07■■■□□ 2.4
VARS-217ENST00000440048 RRAGCQ9HB90 399 aa30.07■■■□□ 2.4
VARS-217ENST00000440048 CASP7P55210 303 aa30.06■■■□□ 2.4
VARS-217ENST00000440048 CTSWP56202 376 aa30.06■■■□□ 2.4
VARS-217ENST00000440048 RPS8P62241 208 aaKnown RBP30.06■■■□□ 2.4
VARS-217ENST00000440048 HNRNPUQ00839 825 aaKnown RBP eCLIP30.06■■■□□ 2.4
VARS-217ENST00000440048 HSPA6P17066 643 aa30.05■■■□□ 2.4
VARS-217ENST00000440048 ALDH1L2Q3SY69 923 aa30.05■■■□□ 2.4
VARS-217ENST00000440048 DPP8Q6V1X1 898 aaPredicted RBP30.05■■■□□ 2.4
VARS-217ENST00000440048 MPNDQ8N594 471 aa30.05■■■□□ 2.4
VARS-217ENST00000440048 BCL2L13Q9BXK5 485 aa30.05■■■□□ 2.4
VARS-217ENST00000440048 CT47B1P0C2W7 299 aaPredicted RBP30.04■■■□□ 2.4
VARS-217ENST00000440048 TTLL11Q8NHH1 800 aa30.04■■■□□ 2.4
VARS-217ENST00000440048 RBM46Q8TBY0 533 aaKnown RBP30.04■■■□□ 2.4
VARS-217ENST00000440048 RTFDC1Q9BY42 306 aaPredicted RBP30.04■■■□□ 2.4
VARS-217ENST00000440048 COL4A5P29400 1685 aa30.04■■■□□ 2.4
VARS-217ENST00000440048 SLC4A10Q6U841 1118 aa30.03■■■□□ 2.4
VARS-217ENST00000440048 LARGE2Q8N3Y3 721 aa30.02■■■□□ 2.4
VARS-217ENST00000440048 SUPT20HQ8NEM7 779 aa30.02■■■□□ 2.4
VARS-217ENST00000440048 PLA2G12BQ9BX93 195 aa30.02■■■□□ 2.4
VARS-217ENST00000440048 WDR90Q96KV7 1748 aa30.02■■■□□ 2.4
VARS-217ENST00000440048 PTPRCP08575 1304 aa30.01■■■□□ 2.4
VARS-217ENST00000440048 DDNO94850 711 aaPredicted RBP30.01■■■□□ 2.39
VARS-217ENST00000440048 JDP2Q8WYK2 163 aa30.01■■■□□ 2.39
VARS-217ENST00000440048 ZNF541Q9H0D2 1346 aa30■■■□□ 2.39
VARS-217ENST00000440048 FZD9O00144 591 aa30■■■□□ 2.39
VARS-217ENST00000440048 PPIP5K2O43314 1243 aa30■■■□□ 2.39
VARS-217ENST00000440048 VEGFAP15692 232 aaPredicted RBP30■■■□□ 2.39
VARS-217ENST00000440048 VPS33BQ9H267 617 aa30■■■□□ 2.39
VARS-217ENST00000440048 SMC4Q9NTJ3 1288 aa30■■■□□ 2.39
VARS-217ENST00000440048 DUOX1Q9NRD9 1551 aa29.99■■■□□ 2.39
VARS-217ENST00000440048 ALDH1L1O75891 902 aa29.99■■■□□ 2.39
VARS-217ENST00000440048 AOC3Q16853 763 aa29.99■■■□□ 2.39
VARS-217ENST00000440048 SRCIN1Q9C0H9 1055 aa29.99■■■□□ 2.39
VARS-217ENST00000440048 GREM2Q9H772 168 aa29.99■■■□□ 2.39
VARS-217ENST00000440048 POTECB2RU33 542 aa29.98■■■□□ 2.39
VARS-217ENST00000440048 NSFL1CQ9UNZ2 370 aaKnown RBP29.98■■■□□ 2.39
VARS-217ENST00000440048 RTL9Q8NET4 1388 aa29.98■■■□□ 2.39
VARS-217ENST00000440048 GPSM2P81274 684 aa29.97■■■□□ 2.39
VARS-217ENST00000440048 FSTL1Q12841 308 aa29.97■■■□□ 2.39
VARS-217ENST00000440048 ANKRD18AQ8IVF6 992 aa29.97■■■□□ 2.39
VARS-217ENST00000440048 GRM8O00222 908 aa29.96■■■□□ 2.39
VARS-217ENST00000440048 NIM1KQ8IY84 436 aa29.96■■■□□ 2.39
VARS-217ENST00000440048 CDC5LQ99459 802 aaKnown RBP29.96■■■□□ 2.39
VARS-217ENST00000440048 LTBP1Q14766 1721 aa29.96■■■□□ 2.39
VARS-217ENST00000440048 SPEF2Q9C093 1822 aa29.95■■■□□ 2.39
VARS-217ENST00000440048 CSF1RP07333 972 aa29.95■■■□□ 2.39
VARS-217ENST00000440048 C9orf78Q9NZ63 289 aaPredicted RBP29.95■■■□□ 2.39
VARS-217ENST00000440048 KIAA2012Q0VF49 1180 aa29.94■■■□□ 2.38
VARS-217ENST00000440048 APLP1P51693 650 aa29.93■■■□□ 2.38
VARS-217ENST00000440048 EIF6P56537 245 aaKnown RBP29.93■■■□□ 2.38
VARS-217ENST00000440048 POLLQ9UGP5 575 aa29.93■■■□□ 2.38
VARS-217ENST00000440048 RARSP54136 660 aaKnown RBP29.92■■■□□ 2.38
VARS-217ENST00000440048 FOXO4P98177 505 aa29.92■■■□□ 2.38
VARS-217ENST00000440048 FAM161AQ3B820 660 aa29.92■■■□□ 2.38
VARS-217ENST00000440048 L3MBTL3Q96JM7 780 aaPredicted RBP29.92■■■□□ 2.38
VARS-217ENST00000440048 C6orf229H3BNL8 230 aa29.91■■■□□ 2.38
VARS-217ENST00000440048 BRPF1P55201 1214 aaPredicted RBP29.91■■■□□ 2.38
VARS-217ENST00000440048 PODXL2Q9NZ53 605 aa29.91■■■□□ 2.38
VARS-217ENST00000440048 SCN4AP35499 1836 aa29.9■■■□□ 2.38
VARS-217ENST00000440048 ITGA6P23229 1130 aa29.9■■■□□ 2.38
VARS-217ENST00000440048 GPC2Q8N158 579 aa29.9■■■□□ 2.38
VARS-217ENST00000440048 SMC1BQ8NDV3 1235 aa29.9■■■□□ 2.38
VARS-217ENST00000440048 TBC1D16Q8TBP0 767 aa29.9■■■□□ 2.38
VARS-217ENST00000440048 BSDC1Q9NW68 430 aaPredicted RBP29.9■■■□□ 2.38
VARS-217ENST00000440048 NOB1Q9ULX3 412 aaKnown RBP29.9■■■□□ 2.38
VARS-217ENST00000440048 WASHC4Q2M389 1173 aa29.89■■■□□ 2.38
VARS-217ENST00000440048 EPHA10Q5JZY3 1008 aa29.89■■■□□ 2.38
VARS-217ENST00000440048 ANKIB1Q9P2G1 1089 aa29.89■■■□□ 2.38
VARS-217ENST00000440048 ZNRF3Q9ULT6 936 aa29.89■■■□□ 2.38
VARS-217ENST00000440048 GJA3Q9Y6H8 435 aa29.88■■■□□ 2.37
VARS-217ENST00000440048 ZBED9Q6R2W3 1325 aa29.88■■■□□ 2.37
VARS-217ENST00000440048 RIMBP2O15034 1052 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms