RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 PGBD1Q96JS3 809 aa13.65□□□□□ -0.22
SMPD4-209ENST00000439886 IFNKQ9P0W0 207 aa13.65□□□□□ -0.22
SMPD4-209ENST00000439886 FEZ2Q9UHY8 353 aaPredicted RBP13.65□□□□□ -0.22
SMPD4-209ENST00000439886 CCDC61Q9Y6R9 512 aa13.65□□□□□ -0.23
SMPD4-209ENST00000439886 ZFYVE16Q7Z3T8 1539 aa13.64□□□□□ -0.23
SMPD4-209ENST00000439886 GPS2Q13227 327 aa13.64□□□□□ -0.23
SMPD4-209ENST00000439886 TDRD7Q8NHU6 1098 aaKnown RBP13.64□□□□□ -0.23
SMPD4-209ENST00000439886 PI4K2BQ8TCG2 481 aa13.64□□□□□ -0.23
SMPD4-209ENST00000439886 EDC3Q96F86 508 aaKnown RBP13.64□□□□□ -0.23
SMPD4-209ENST00000439886 ECHDC1Q9NTX5 307 aa13.64□□□□□ -0.23
SMPD4-209ENST00000439886 WASLO00401 505 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-209ENST00000439886 LMOD1P29536 600 aaPredicted RBP13.64□□□□□ -0.23
SMPD4-209ENST00000439886 LMAN1P49257 510 aa13.64□□□□□ -0.23
SMPD4-209ENST00000439886 CLCN6P51797 869 aa13.64□□□□□ -0.23
SMPD4-209ENST00000439886 TEFQ10587 303 aa13.64□□□□□ -0.23
SMPD4-209ENST00000439886 G3BP1Q13283 466 aaKnown RBP eCLIP13.64□□□□□ -0.234e-7■□□□□ 10.4
SMPD4-209ENST00000439886 CEP83Q9Y592 693 aa13.64□□□□□ -0.23
SMPD4-209ENST00000439886 GOLGA8FQ08AF8 430 aa13.63□□□□□ -0.23
SMPD4-209ENST00000439886 GOLGA8DPQ0D2H9 430 aa13.63□□□□□ -0.23
SMPD4-209ENST00000439886 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.63□□□□□ -0.23
SMPD4-209ENST00000439886 CFAP45Q9UL16 551 aa13.63□□□□□ -0.23
SMPD4-209ENST00000439886 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
SMPD4-209ENST00000439886 TPM4P67936 248 aa13.63□□□□□ -0.23
SMPD4-209ENST00000439886 RAB11FIP4Q86YS3 637 aa13.63□□□□□ -0.23
SMPD4-209ENST00000439886 CARD6Q9BX69 1037 aa13.63□□□□□ -0.23
SMPD4-209ENST00000439886 NAT10Q9H0A0 1025 aaKnown RBP13.63□□□□□ -0.23
SMPD4-209ENST00000439886 ANO10Q9NW15 660 aa13.63□□□□□ -0.23
SMPD4-209ENST00000439886 TAF6LQ9Y6J9 622 aa13.63□□□□□ -0.23
SMPD4-209ENST00000439886 TTLL5Q6EMB2 1281 aa13.63□□□□□ -0.23
SMPD4-209ENST00000439886 MROH2AA6NES4 1674 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 A0A1B0GVL5 298 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 HSP90AB4PQ58FF6 505 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 CCDC191Q8NCU4 936 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 ZSWIM6Q9HCJ5 1215 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 SSH2Q76I76 1423 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 KIAA1210Q9ULL0 1709 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 SLC27A2O14975 620 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 NEMFO60524 1076 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 SERPINC1P01008 464 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 CHST3Q7LGC8 479 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 NGDNQ8NEJ9 315 aaKnown RBP13.62□□□□□ -0.23
SMPD4-209ENST00000439886 FBXO3Q9UK99 471 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 GLI2P10070 1586 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 KNDC1Q76NI1 1749 aa13.62□□□□□ -0.23
SMPD4-209ENST00000439886 POLR3DP05423 398 aaPredicted RBP13.61□□□□□ -0.23
SMPD4-209ENST00000439886 ST3GAL1Q11201 340 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 SYCP1Q15431 976 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 SALL3Q9BXA9 1300 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 STK38Q15208 465 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 ANKRD1Q15327 319 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 Q6ZUG5 572 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 KLHDC4Q8TBB5 520 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 SIRT1Q96EB6 747 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 NCAPGQ9BPX3 1015 aa13.61□□□□□ -0.23
SMPD4-209ENST00000439886 TDO2P48775 406 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 CFAP100Q494V2 611 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 XPO4Q9C0E2 1151 aaKnown RBP13.6□□□□□ -0.23
SMPD4-209ENST00000439886 RASSF4Q9H2L5 321 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 ADGRB1O14514 1584 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 CCDC172P0C7W6 258 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 PNMA6AP0CW24 399 aaPredicted RBP13.6□□□□□ -0.23
SMPD4-209ENST00000439886 HSP90AB3PQ58FF7 597 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 CCDC129Q6ZRS4 1044 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 SSH3Q8TE77 659 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 ZNF446Q9NWS9 450 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 TULP2O00295 520 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 SEMA3FQ13275 785 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 OTUD7BQ6GQQ9 843 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 UTP14AQ9BVJ6 771 aaKnown RBP13.6□□□□□ -0.23
SMPD4-209ENST00000439886 NCOA5Q9HCD5 579 aaKnown RBP13.6□□□□□ -0.23
SMPD4-209ENST00000439886 CHPF2Q9P2E5 772 aa13.6□□□□□ -0.23
SMPD4-209ENST00000439886 ABCC3O15438 1527 aa13.59□□□□□ -0.23
SMPD4-209ENST00000439886 A0A0D9SFI3 127 aa13.59□□□□□ -0.23
SMPD4-209ENST00000439886 ST5P78524 1137 aa13.59□□□□□ -0.23
SMPD4-209ENST00000439886 CREBRFQ8IUR6 639 aa13.59□□□□□ -0.23
SMPD4-209ENST00000439886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.59□□□□□ -0.23
SMPD4-209ENST00000439886 OAS2P29728 719 aaKnown RBP13.59□□□□□ -0.23
SMPD4-209ENST00000439886 MCM6Q14566 821 aa13.59□□□□□ -0.23
SMPD4-209ENST00000439886 EVI5LQ96CN4 794 aa13.59□□□□□ -0.23
SMPD4-209ENST00000439886 DRC1Q96MC2 740 aa13.59□□□□□ -0.23
SMPD4-209ENST00000439886 GNAT3A8MTJ3 354 aa13.58□□□□□ -0.23
SMPD4-209ENST00000439886 EVCP57679 992 aa13.58□□□□□ -0.23
SMPD4-209ENST00000439886 RAD51AP2Q09MP3 1159 aa13.58□□□□□ -0.23
SMPD4-209ENST00000439886 DNAAF4Q8WXU2 420 aa13.58□□□□□ -0.23
SMPD4-209ENST00000439886 CAMSAP1Q5T5Y3 1602 aa13.58□□□□□ -0.24
SMPD4-209ENST00000439886 KIF2AO00139 706 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-209ENST00000439886 IRF6O14896 467 aa13.58□□□□□ -0.24
SMPD4-209ENST00000439886 GNG11P61952 73 aa13.58□□□□□ -0.24
SMPD4-209ENST00000439886 CWF19L2Q2TBE0 894 aaKnown RBP13.58□□□□□ -0.24
SMPD4-209ENST00000439886 PPP1R13BQ96KQ4 1090 aa13.58□□□□□ -0.24
SMPD4-209ENST00000439886 ESF1Q9H501 851 aaKnown RBP13.58□□□□□ -0.24
SMPD4-209ENST00000439886 POGZQ7Z3K3 1410 aa13.58□□□□□ -0.24
SMPD4-209ENST00000439886 KIAA0232Q92628 1395 aa13.58□□□□□ -0.24
SMPD4-209ENST00000439886 ANKRD65E5RJM6 399 aa13.58□□□□□ -0.24
SMPD4-209ENST00000439886 DHX16O60231 1041 aaKnown RBP13.58□□□□□ -0.24
SMPD4-209ENST00000439886 PHACTR2O75167 634 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms