RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ZNF34Q8IZ26 560 aa14.24□□□□□ -0.13
SMAD3-202ENST00000439724 ARXQ96QS3 562 aa14.24□□□□□ -0.13
SMAD3-202ENST00000439724 HAUS7Q99871 368 aa14.24□□□□□ -0.13
SMAD3-202ENST00000439724 FSD1Q9BTV5 496 aa14.24□□□□□ -0.13
SMAD3-202ENST00000439724 MED23Q9ULK4 1368 aa14.23□□□□□ -0.13
SMAD3-202ENST00000439724 GPTP24298 496 aa14.23□□□□□ -0.13
SMAD3-202ENST00000439724 NMIQ13287 307 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-202ENST00000439724 ITPK1Q13572 414 aa14.23□□□□□ -0.13
SMAD3-202ENST00000439724 FAM98CQ17RN3 349 aaKnown RBP14.23□□□□□ -0.13
SMAD3-202ENST00000439724 LRRC24Q50LG9 513 aa14.23□□□□□ -0.13
SMAD3-202ENST00000439724 TICAM2Q86XR7 235 aa14.23□□□□□ -0.13
SMAD3-202ENST00000439724 KCNB2Q92953 911 aa14.23□□□□□ -0.13
SMAD3-202ENST00000439724 ZNF594Q96JF6 807 aaPredicted RBP14.23□□□□□ -0.13
SMAD3-202ENST00000439724 BCORQ6W2J9 1755 aa14.23□□□□□ -0.13
SMAD3-202ENST00000439724 CCDC171Q6TFL3 1326 aa14.22□□□□□ -0.13
SMAD3-202ENST00000439724 LRP5O75197 1615 aa14.22□□□□□ -0.13
SMAD3-202ENST00000439724 CWC22Q9HCG8 908 aaKnown RBP14.22□□□□□ -0.13
SMAD3-202ENST00000439724 TBC1D2BQ9UPU7 963 aa14.22□□□□□ -0.13
SMAD3-202ENST00000439724 SNX14Q9Y5W7 946 aa14.22□□□□□ -0.13
SMAD3-202ENST00000439724 UBN2Q6ZU65 1347 aa14.22□□□□□ -0.13
SMAD3-202ENST00000439724 LAMB2P55268 1798 aa14.22□□□□□ -0.13
SMAD3-202ENST00000439724 A0A0G2JS52 829 aa14.21□□□□□ -0.13
SMAD3-202ENST00000439724 MCM4P33991 863 aa14.21□□□□□ -0.13
SMAD3-202ENST00000439724 DEKP35659 375 aaKnown RBP14.21□□□□□ -0.13
SMAD3-202ENST00000439724 CTSWP56202 376 aa14.21□□□□□ -0.13
SMAD3-202ENST00000439724 IFIT5Q13325 482 aaKnown RBP14.21□□□□□ -0.13
SMAD3-202ENST00000439724 FAM227BQ96M60 508 aa14.21□□□□□ -0.13
SMAD3-202ENST00000439724 PUS3Q9BZE2 481 aaKnown RBP14.21□□□□□ -0.13
SMAD3-202ENST00000439724 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
SMAD3-202ENST00000439724 CEP126Q9P2H0 1117 aa14.21□□□□□ -0.13
SMAD3-202ENST00000439724 A0A0D9SFI3 127 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 IRS4O14654 1257 aaPredicted RBP14.2□□□□□ -0.14
SMAD3-202ENST00000439724 PDE8AO60658 829 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 PTH1RQ03431 593 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 TTLL11Q8NHH1 800 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.2□□□□□ -0.14
SMAD3-202ENST00000439724 AK7Q96M32 723 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 TRMT112Q9UI30 125 aaKnown RBP14.2□□□□□ -0.14
SMAD3-202ENST00000439724 AKAP2Q9Y2D5 859 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 RIC1Q4ADV7 1423 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 A0A1B0GUL7 405 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 KCNQ2O43526 872 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 CAMTA2O94983 1202 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 CUL4AQ13619 759 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 NECTIN1Q15223 517 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 MAP4K1Q92918 833 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 TNPO1Q92973 898 aaKnown RBP14.2□□□□□ -0.14
SMAD3-202ENST00000439724 TMX3Q96JJ7 454 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 NEUROD6Q96NK8 337 aa14.2□□□□□ -0.14
SMAD3-202ENST00000439724 NUCB2P80303 420 aa14.19□□□□□ -0.14
SMAD3-202ENST00000439724 PARP10Q53GL7 1025 aa14.19□□□□□ -0.14
SMAD3-202ENST00000439724 TAF7LQ5H9L4 462 aa14.19□□□□□ -0.14
SMAD3-202ENST00000439724 RASEFQ8IZ41 740 aa14.19□□□□□ -0.14
SMAD3-202ENST00000439724 SYNE4Q8N205 404 aa14.19□□□□□ -0.14
SMAD3-202ENST00000439724 KBTBD3Q8NAB2 608 aa14.19□□□□□ -0.14
SMAD3-202ENST00000439724 EDC3Q96F86 508 aaKnown RBP14.19□□□□□ -0.14
SMAD3-202ENST00000439724 UPF3BQ9BZI7 483 aaKnown RBP14.19□□□□□ -0.14
SMAD3-202ENST00000439724 TM6SF1Q9BZW5 370 aa14.19□□□□□ -0.14
SMAD3-202ENST00000439724 USP21Q9UK80 565 aa14.19□□□□□ -0.14
SMAD3-202ENST00000439724 DDX60Q8IY21 1712 aaKnown RBP14.18□□□□□ -0.14
SMAD3-202ENST00000439724 BTAF1O14981 1849 aa14.18□□□□□ -0.14
SMAD3-202ENST00000439724 ANKRD18BA2A2Z9 1011 aa14.18□□□□□ -0.14
SMAD3-202ENST00000439724 DDX11L8A8MPP1 907 aa14.18□□□□□ -0.14
SMAD3-202ENST00000439724 ITGA6P23229 1130 aa14.18□□□□□ -0.14
SMAD3-202ENST00000439724 TIMM10P62072 90 aa14.18□□□□□ -0.14
SMAD3-202ENST00000439724 CLEC17AQ6ZS10 378 aa14.18□□□□□ -0.14
SMAD3-202ENST00000439724 INTS4Q96HW7 963 aaKnown RBP14.18□□□□□ -0.14
SMAD3-202ENST00000439724 TTC14Q96N46 770 aa14.18□□□□□ -0.14
SMAD3-202ENST00000439724 GBP4Q96PP9 640 aa14.18□□□□□ -0.14
SMAD3-202ENST00000439724 DNAJC2Q99543 621 aaKnown RBP14.18□□□□□ -0.14
SMAD3-202ENST00000439724 GREM2Q9H772 168 aa14.18□□□□□ -0.14
SMAD3-202ENST00000439724 RBM8AQ9Y5S9 174 aaKnown RBP14.18□□□□□ -0.14
SMAD3-202ENST00000439724 ABCC12Q96J65 1359 aa14.18□□□□□ -0.14
SMAD3-202ENST00000439724 SCN7AQ01118 1682 aa14.17□□□□□ -0.14
SMAD3-202ENST00000439724 RGL2O15211 777 aa14.17□□□□□ -0.14
SMAD3-202ENST00000439724 CYP2E1P05181 493 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-202ENST00000439724 CERKQ8TCT0 537 aa14.17□□□□□ -0.14
SMAD3-202ENST00000439724 RIPOR2Q9Y4F9 1068 aa14.17□□□□□ -0.14
SMAD3-202ENST00000439724 SH3TC1Q8TE82 1336 aa14.17□□□□□ -0.14
SMAD3-202ENST00000439724 CNTNAP4Q9C0A0 1308 aa14.17□□□□□ -0.14
SMAD3-202ENST00000439724 ARAP2Q8WZ64 1704 aa14.16□□□□□ -0.14
SMAD3-202ENST00000439724 GSE1Q14687 1217 aa14.16□□□□□ -0.14
SMAD3-202ENST00000439724 CREB3L3Q68CJ9 461 aa14.16□□□□□ -0.14
SMAD3-202ENST00000439724 PRPF40BQ6NWY9 871 aaKnown RBP14.16□□□□□ -0.14
SMAD3-202ENST00000439724 ZGPATQ8N5A5 531 aaKnown RBP14.16□□□□□ -0.14
SMAD3-202ENST00000439724 CCDC85AQ96PX6 553 aaPredicted RBP14.16□□□□□ -0.14
SMAD3-202ENST00000439724 PAG1Q9NWQ8 432 aa14.16□□□□□ -0.14
SMAD3-202ENST00000439724 RPAP1Q9BWH6 1393 aaPredicted RBP14.16□□□□□ -0.14
SMAD3-202ENST00000439724 IFIT1P09914 478 aaKnown RBP14.15□□□□□ -0.14
SMAD3-202ENST00000439724 ZKSCAN1P17029 563 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-202ENST00000439724 SSFA2P28290 1259 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 SUSD4Q5VX71 490 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 DDX46Q7L014 1031 aaKnown RBP14.15□□□□□ -0.14
SMAD3-202ENST00000439724 ZNF589Q86UQ0 364 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-202ENST00000439724 UTP14AQ9BVJ6 771 aaKnown RBP14.15□□□□□ -0.14
SMAD3-202ENST00000439724 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 RTL9Q8NET4 1388 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 SLC27A2O14975 620 aa14.15□□□□□ -0.14
SMAD3-202ENST00000439724 TAF5LO75529 589 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 513.4 ms